Factsheet for Zm00001d045397_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004440_P001
Zm00001d016898_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G25160.1	Zm00001d004440_P001	AT5G64330.1	16777956
AT4G25160.1	Zm00001d016898_P001	AT5G64330.1	16777956

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19255	Sorghum	cytosol	85.87	80.55
Os06t0140800-01	Rice	plasma membrane	71.2	66.87
TraesCS4A01G382900.1	Wheat	cytosol	64.33	59.03
TraesCS7D01G079400.2	Wheat	cytosol	64.47	57.82
HORVU7Hr1G018750.2	Barley	cytosol	59.58	54.8
TraesCS4A01G382700.4	Wheat	cytosol	59.31	53.77
TraesCS7A01G084400.4	Wheat	cytosol	58.92	53.22
HORVU7Hr1G018700.1	Barley	cytosol, plastid	47.56	49.11
CDY12184	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	32.76	46.88
VIT_16s0013g01920.t01	Wine grape	cytosol	46.5	44.9
GSMUA_Achr5P21060_001	Banana	cytosol	45.44	42.84
GSMUA_Achr11P...	Banana	cytosol	44.78	42.43
CDY00462	Canola	mitochondrion, plasma membrane	35.67	42.39
KRH56330	Soybean	cytosol, plasma membrane, plastid	44.65	42.3
KRH62634	Soybean	cytosol	43.99	41.11
Solyc03g093450.2.1	Tomato	nucleus	43.2	40.47
PGSC0003DMT400048527	Potato	cytosol	43.06	40.35
Solyc05g051610.1.1	Tomato	cytosol	44.25	39.93
Bra012943.1-P	Field mustard	cytosol	37.65	39.69
PGSC0003DMT400018596	Potato	cytosol	43.86	39.2
AT4G25160.1	Thale cress	plastid	42.8	38.8
CDX92680	Canola	plastid	41.35	38.74
Bra019185.1-P	Field mustard	plastid	41.08	38.49
CDY11059	Canola	plastid	41.08	38.3
CDY00464	Canola	cytosol	39.23	38.27
CDY02134	Canola	cytosol	38.97	38.26
CDY34347	Canola	plastid	42.4	38.21
CDY42870	Canola	cytosol	39.89	38.13
Bra013868.1-P	Field mustard	plastid	42.27	38.1
Bra022543.1-P	Field mustard	plastid	39.76	38.05
CDX99935	Canola	cytosol	37.25	38.01
CDY23058	Canola	cytosol, plastid	39.63	37.88
Bra029318.1-P	Field mustard	cytosol	39.63	37.88
CDY68766	Canola	cytosol, plastid	39.63	37.88
CDY16329	Canola	plastid	39.63	37.88
CDX91574	Canola	plastid	39.37	37.34
Bra015198.1-P	Field mustard	cytosol	37.25	37.06
AT5G61560.3	Thale cress	cytosol	39.89	37.06
CDY00461	Canola	cytosol	38.84	37.03
CDX87220	Canola	cytosol, peroxisome, plasma membrane	40.42	37.0
CDY16813	Canola	cytosol	40.29	36.75
AT5G51270.1	Thale cress	cytosol	38.84	36.52
CDY02135	Canola	cytosol	40.69	36.49
CDY23059	Canola	cytosol	40.55	36.2
Bra012944.1-P	Field mustard	cytosol	38.71	36.17
AT5G61550.2	Thale cress	cytosol	40.69	35.81
Bra029317.1-P	Field mustard	cytosol, nucleus, plastid	40.03	35.44
CDY61455	Canola	cytosol	37.78	35.27
Bra035920.1-P	Field mustard	cytosol	36.72	35.15
CDY16812	Canola	cytosol	36.86	35.01
CDY42871	Canola	cytosol	36.99	34.06
Bra015196.1-P	Field mustard	cytosol	29.06	33.33
CDX87221	Canola	cytosol	31.18	32.07
Zm00001d020416_P002	Maize	cytosol	37.78	31.99
Zm00001d053587_P001	Maize	plastid	31.04	31.84
Zm00001d053588_P001	Maize	cytosol	29.06	30.51
Zm00001d045056_P002	Maize	nucleus	30.78	29.61
Zm00001d052067_P004	Maize	cytosol	30.78	29.38
Zm00001d044293_P007	Maize	cytosol	28.93	28.97
Zm00001d046364_P001	Maize	cytosol	25.1	28.79
Zm00001d029829_P001	Maize	cytosol	22.32	27.39
Zm00001d051397_P001	Maize	nucleus	29.99	26.33
Zm00001d045230_P001	Maize	cytosol	25.89	25.89
Zm00001d002693_P001	Maize	plastid	28.8	24.91
CDY03375	Canola	plastid	42.4	24.75
Zm00001d053876_P011	Maize	plastid	26.55	24.69
Zm00001d051875_P001	Maize	mitochondrion	24.04	20.61
Zm00001d011210_P001	Maize	plastid	28.01	19.06
Zm00001d051399_P002	Maize	cytosol	19.82	15.69
Zm00001d003621_P002	Maize	cytosol, plastid	24.97	8.92

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	UniProt:A0A1D6NVT3	ProteinID:AQL02225.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR003613	InterPro:IPR013083	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF04564	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF29	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00504	SUPFAM:SSF56112	SUPFAM:SSF57850	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000844D45F	InterPro:Ubox_domain	EnsemblPlantsGene:Zm00001d045397	EnsemblPlants:Zm00001d045397_P001	EnsemblPlants:Zm00001d045397_T001	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

U-box domain-containing protein 35

Coordinates

chr9:+:20623494..20630674

Molecular Weight (calculated)

83218.6 Da

IEP (calculated)

6.713

GRAVY (calculated)

-0.280

Length

757 amino acids

Sequence
(BLAST)

001: MKVEEAGGGE IGEMEPPAVS TVAVAVSGGR SSRHALKWAL DKFVPEGRVL FRILHVRPAI TMVPTPSEKL KGSKTATKIS ECIPSFCTAY VISKGKLSFV
101: RSATSDIVET PRSISSSTIS SPSTRSLSSC APSVIELNMM SSMLVVLKVS VLMILPITEW GDIYATTNVP LHQPSLPLQR DQALAIINKL SNRRVSSSSS
201: VVSEISYNDE PALTRSHSMI SEMQFSSGSS GNSVYKSFQR DNLPNNSDEA SVSEISENVN HLSGQDDLRL EIERLRVKLQ HLHKLHEGAL HESLDTTQKL
301: HKSGARHIED EIKVKEIQLA EDTVRRLVRK QEMEEREAAT EAEFYQRSDE MEAKQSYDGA QEAGENEMGK KIAGRGFGEY NRYTWEEIQA STSSFSSALM
401: IGKGSYGTVY RAKLRHTVAA VKVLNSPEGC GTQQLQQELE VLGKIRHPHL LMMLGACPEH GCLVYEYMEN GSLDDMLQRR KQNSSPLAWF DRFRVAWEVA
501: AALMFLHSSK PEPIIHRDLK PANILLDGNL VSKIGDVGLS TLLPVPGTGG GGQDVPSTMV KDTAPVGTFC YIDPEYQRTG VLSMKSDVYA LGIVLLQLLT
601: ARPPVGLAHA VETALEEGRF ADVLDAAAGQ WPLGEAQELA VLALRCSEMR RKDRPDLNGR VLPALERLKD VAAKAREGAF QGHAAAPPSH FICPILQEVM
701: VDPYVASDGY TYDGKAIELW LSTNETSPMT NLRLPNKSLI PNHSLRSAIM DWRSRSK

Best Arabidopsis Sequence Match ( AT4G25160.1 )
(BLAST)

001: MSRSPDKLAL PPPPPPPPSR TVVVALSGSS KSKYVVTWAI EKFATEGNVG FKLLHIHPMI TSVPTPMGNA IPISEVRDDV VTAYRQEILW QSEEMLKPYT
101: KLFVRRKVAV EVLVIESDNV AAAIAEEVTR DSIDRIVIGG SSRSFFSRKA DICSVISALM PNFCTVYVVS KGKLSCVRPS DSDGNATIRE DGSERTNSSS
201: GSSGPTSDSS DVMSSAHDSQ SRPLSLPVRR MQHFPAIAGQ ASVPMETSSV GSDETRCMSL DAEEARDVSS INRSSTDTTS RWTPRRRDYE ERKEAMSSSS
301: SNREYGNFGT RFSWSGMGVD TTHSRASQQA SNMSDALSEQ SYTDNQVNLN FEVEKLRAEL RHVQEMYAVA QTETFDASRK LGELNQRRLE EAIKLEELKL
401: KEYEARELAE KEKQNFEKAR RDAESMRERA EREIAQRREA ERKSARDTKE KEKLEGTLGS PQLQYQHFAW EEIMAATSSF SEELKIGMGA YGAVYKCNLH
501: HTTAVVKVLQ SAENQLSKQF QQELEILSKI RHPHLVLLLG ACPEQGALVY EYMENGSLED RLFQVNNSPP LPWFERFRIA WEVAAALVFL HKSKPKPIIH
601: RDLKPANILL DHNFVSKVGD VGLSTMVQVD PLSTKFTIYK QTSPVGTLCY IDPEYQRTGR ISSKSDIYSF GMILLQLLTA KPAIALTHFV ESAMDSNDEF
701: LKILDQKAGN WPIEETRELA ALALCCTELR GKDRPDLKDQ ILPALENLKK VAEKARNSFS GVSTQPPTHF ICPLLKDVMN EPCVAADGYT YDRHAIEEWL
801: KEHNTSPMTD SPLHSKNLLP NYTLYTAIME WRSTR

Arabidopsis Description

PUB35U-box domain-containing protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW11]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.