Factsheet for Zm00001d003621_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26353	Sorghum	plastid	30.59	79.02
TraesCS2D01G076700.1	Wheat	plastid	21.67	58.4
Os10t0100500-01	Rice	plastid	22.33	58.32
TraesCS2A01G079300.1	Wheat	plastid	21.72	58.23
TraesCS2B01G094100.1	Wheat	cytosol, plastid	21.25	56.89
HORVU2Hr1G013130.1	Barley	cytosol, plastid	21.06	55.34
GSMUA_Achr10P...	Banana	cytosol	17.19	41.55
VIT_06s0004g04580.t01	Wine grape	cytosol	16.24	41.15
KRH29803	Soybean	cytosol	15.01	40.46
KRH10267	Soybean	plastid	15.58	40.39
KRH23063	Soybean	plastid	15.58	40.19
Solyc11g065950.1.1	Tomato	plastid	14.64	36.26
Zm00001d029829_P001	Maize	cytosol	8.92	30.63
Zm00001d051397_P001	Maize	nucleus	11.1	27.26
Zm00001d045230_P001	Maize	cytosol	9.35	26.16
Zm00001d002693_P001	Maize	plastid	10.53	25.49
Zm00001d053587_P001	Maize	plastid	8.88	25.47
Zm00001d045397_P001	Maize	cytosol	8.92	24.97
Zm00001d053588_P001	Maize	cytosol	8.12	23.86
Zm00001d051875_P001	Maize	mitochondrion	9.82	23.56
Zm00001d045056_P002	Maize	nucleus	8.59	23.13
Zm00001d046364_P001	Maize	cytosol	7.18	23.03
Zm00001d044293_P007	Maize	cytosol	8.22	23.02
Zm00001d052067_P004	Maize	cytosol	8.45	22.57
Zm00001d020416_P002	Maize	cytosol	9.44	22.37
Zm00001d053876_P011	Maize	plastid	7.65	19.9
Zm00001d051399_P002	Maize	cytosol	8.31	18.41
Zm00001d011210_P001	Maize	plastid	8.17	15.56
Bra035078.1-P	Field mustard	cytosol	8.22	14.15
Bra035077.1-P	Field mustard	plastid	2.12	7.67

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:103646429	MapMan:15.3.6.2.1	MapMan:18.4.1.39.2	Gene3D:2.130.10.10	Gene3D:3.30.200.20
Gene3D:3.30.40.10	Gene3D:3.40.50.620	UniProt:A0A1D6EA75	ncoils:Coil	InterPro:Elp1	GO:GO:0000166
GO:GO:0002098	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0033588	InterPro:IPR000719	InterPro:IPR003613
InterPro:IPR013083	InterPro:IPR014729	InterPro:IPR015943	InterPro:Kinase-like_dom_sf	ProteinID:ONM17296.1	PFAM:PF04762
PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR12747	InterPro:Prot_kinase_dom	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00504
SUPFAM:SSF52402	SUPFAM:SSF56112	SUPFAM:SSF57850	SUPFAM:SSF69322	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI0008439412
InterPro:Ubox_domain	InterPro:WD40/YVTN_repeat-like_dom_sf	EnsemblPlantsGene:Zm00001d003621	EnsemblPlants:Zm00001d003621_P002	EnsemblPlants:Zm00001d003621_T002	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

U-box domain-containing protein 33

Coordinates

chr2:+:50696420..50706825

Molecular Weight (calculated)

236383.0 Da

IEP (calculated)

6.422

GRAVY (calculated)

-0.234

Length

2118 amino acids

Sequence
(BLAST)

0001: MEILSPSPPP SHCPLLRCGG HWEQHHGETW VHVAVGRSPE KTLSLLRWAL RRFGCSRIVL LHVHHPSPLI PTLLGKIPAV QATEEVVLSH RKSEKEEMNK
0101: ILLTYLAFCH RAKVQARLLV TENGQIHDGI LSLVDHHRIT KLVMGSTPDN CFKLKYGKES LMASSAPAFC QIWFVWRGRH IWTREASAAT DNATPVQYQY
0201: DVMTTKRIRF SSYTDNTGAI LDEGYPAHEA LTTVDLNQGV VSDCGQSNDY EAFGEHEEVL ANVKQLMMEA DRSRKEAFSE LMKRKETESK AASAFAKNTR
0301: CLAPLPPSCF DSMPISLYSI DPKNRKTKDS DSAKKHEIEM REELEVVLVD TRKQHEDLIK NKERAVSVLD SSTRRSAILD AHAEKIKLQI DEFSAELEVI
0401: QSSIETLRQK KLKMQRLESK HIDLDKGCTY SHATLSNCAS NAFGDDLYGF REFTVLDMQS ATCKFSESFR MWSQGRGCVY KGEIMNRTVM IYKLHCHSIE
0501: SVRQFQQEVY ILSNVRHPHL VTLVGACPEA LCLVYEYLPN GSLHDRLFSR RSSRHLPWRI RARIVAEISD ALLFLHSCKP QTIVHGNLKL ENILLDTECH
0601: CKIADFGISR LFTGDVKDYP SGGSEPPEGS FPYADPEYMR SKVLTPKSDV YCFGTVILQL LTGRQEPARR LAGEVRCAMA CGKLSSILDP AAGHWPMEVA
0701: GRLAELGLRC SEDRSRDRPD LTAETEIMHD PQVCAADGVT YEGRAIRERM ELETGQGTAP LNNLKLEHLS LTPNHALRGQ MLQTHKVHMR NWELRDKMLH
0801: CKVYNSTWRV QEKKFAMPTT SSCSFPGCAD YLAFVPLLQQ LLQWSKTATQ HSDMEEVVLD PGDRIVAMDY LMERESLLLG SSDGCLLLYN VEEKTTEVVG
0901: RLEGGVNTIA SSPDGALLSV TTGLGQLLVI TQDWEVLFET SLDPQDETID NTDSTGGQSR SAISWRGDGK YFATLVAPES FSSPTKLNVW ERESGKLHSS
1001: SDAKTFMGAS LDWMPSGAKV ATALDRRTEG KCPLIIFYEK NGLERSHFSI DEPGEVAIQA LKWNCNSEIL AALVSSGQHD VIKIWTCRNN HWYLKHELRY
1101: TKEEGVKFFW DPTKPMHLIC WTLSGQVIIH KFAWTTAVSE SSIALVIDGS HVLVTPLILG LMPPPMSLFH LAFPCAVNEV SFVTNNSKSH LAAYLSNGSL
1201: SVVELPAPDT WEEFEGNGIS VDPCCSDFTL NNCMHLTWID TRTLIGICCY SEHLSSTKIR SSEASNLVDK HDSLFFIHEI ELKCSESSVP GSVCSSGWHA
1301: RVSKKVQLES SVIGVSPNPA KRGSAFIQVS GGKIIEYCSS LNLLNMCPPA QFSGIGSDLC FPASCPWMTA VLCYENGMTE PLLFGLDESG KLYMGKRLLS
1401: NNCSSFTLYS SVYGATEPVM SHLLVTTKQD LLFIVDVNEV LLKDIEVTID GLVSSPARGK QNKEYITVWE KGAKLVGVLH GDEAAVIMQT TRGNLECTYP
1501: RKLVLVSIVQ ALVQKRFKDA IGMVRRHRID FNIIVDYCGL NAFMDSAADF VKQVNNLTHV TEFVCSMKNS NVSSKLYEAY ISFPDQCAIP MADNESSPGL
1601: FLGNKVTSVL MAIRKALEEQ IEESSSRELC ILTTLARSEP PLLEQALNRI KLLRESELLG LDDAKRKLYP SAEESLKHLL WLTDTEAVFS AALGLYDLNL
1701: AAIVALNSQK DPKEFLPFLK SLECLPPAIM RYTIDLRLGR YESALRNIVS AGDAYHEDCM KLLNDNPQLF PLGLQLFNEP DKRNQILEAW GDHLSGEKCF
1801: EDAALTYQCC SSYQKSLRAY RACGDWRGVF TVAGLLELKR EEIVQLAHEL CDEFQALGKP GDAARVALEY CSDAERGVSY YIMAREWEEA LRVAYMLSTH
1901: DLVEAVRDAA SECAASLIAE YQEGLLKIGK YAARYLAVRQ RRLSLAAKLR SEDRFMDVED DSVSETSTSF SEMSAYTTRE SSASVMSSNA SKSRAARRQK
2001: KGGKIRAGSP GEEMALVEHL RGMALTGGAQ NELKSLLVAL IQLGKAETAR RVQEAADSFE VSQRAAVKLA EDTVSSDRVE ERAHTLERYV RMLRDRESGH
2101: GEAGGTWRIN ALSPPVTG

Best Arabidopsis Sequence Match ( AT5G13680.1 )
(BLAST)

0001: MKNLKLFSEV PQNIQLHSTE EVVQFAAYDI DQSRLFFASS ANFVYALQLS SFQNESAGAK SAMPVEVCSI DIEPGDFITA FDYLAEKESL LIGTSHGLLL
0101: VHNVESDVTE LVGNIEGGVK CISPNPTGDL LGLITGLGQL LVMTYDWALM YEKALGEVPE GGYVRETNDL SVNCGGISIS WRGDGKYFAT MGEVYESGCM
0201: SKKIKIWESD SGALQSSSET KEFTQGILEW MPSGAKIAAV YKRKSDDSSP SIAFFERNGL ERSSFRIGEP EDATESCENL KWNSASDLLA GVVSCKTYDA
0301: IRVWFFSNNH WYLKQEIRYP REAGVTVMWD PTKPLQLICW TLSGQVSVRH FMWVTAVMED STAFVIDNSK ILVTPLSLSL MPPPMYLFSL SFSSAVRDIA
0401: YYSRNSKNCL AVFLSDGNLS FVEFPAPNTW EDLEGKDFSV EISDCKTALG SFVHLLWLDV HSLLCVSAYG SSHNKCLSSG GYDTELHGSY LQEVEVVCHE
0501: DHVPDQVTCS GFKASITFQT LLESPVLALA WNPSKRDSAF VEFEGGKVLG YASRSEIMET RSSDDSVCFP STCPWVRVAQ VDASGVHKPL ICGLDDMGRL
0601: SINGKNLCNN CSSFSFYSEL ANEVVTHLII LTKQDFLFIV DTKDVLNGDV ALGNVFFVID GRRRDEENMS YVNIWERGAK VIGVLNGDEA AVILQTMRGN
0701: LECIYPRKLV LSSITNALAQ QRFKDAFNLV RRHRIDFNVI VDLYGWQAFL QSAVAFVEQV NNLNHVTEFV CAMKNEDVTE TLYKKFSFSK KGDEVFRVKD
0801: SCSNKVSSVL QAIRKALEEH IPESPSRELC ILTTLARSDP PAIEESLLRI KSVREMELLN SSDDIRKKSC PSAEEALKHL LWLLDSEAVF EAALGLYDLN
0901: LAAIVALNSQ RDPKEFLPYL QELEKMPESL MHFKIDIKLQ RFDSALRNIV SAGVGYFPDC MNLIKKNPQL FPLGLLLITD PEKKLVVLEA WADHLIDEKR
1001: FEDAATTYLC CCKLEKASKA YRECGDWSGV LRVGALMKLG KDEILKLAYE LCEEVNALGK PAEAAKIALE YCSDISGGIS LLINAREWEE ALRVAFLHTA
1101: DDRISVVKSS ALECASGLVS EFKESIEKVG KYLTRYLAVR QRRLLLAAKL KSEERSVVDL DDDTASEASS NLSGMSAYTL GTRRGSAASV SSSNATSRAR
1201: DLRRQRKSGK IRAGSAGEEM ALVDHLKGMR MTDGGKRELK SLLICLVTLG EMESAQKLQQ TAENFQVSQV AAVELAHDTV SSESVDEEVY CFERYAQKTR
1301: STARDSDAFS WMLKVFISP

Arabidopsis Description

ELP1Elongator complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.