Factsheet for Zm00001d002693_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051397_P001	Maize	nucleus	50.06	50.81
GSMUA_Achr5P12380_001	Banana	cytosol	43.77	47.88
Zm00001d029829_P001	Maize	cytosol	30.63	43.44
GSMUA_Achr8P11510_001	Banana	cytosol	40.11	41.29
VIT_15s0046g02480.t01	Wine grape	cytosol	40.46	40.18
KRH00764	Soybean	plastid	39.43	39.07
CDY27350	Canola	plastid	35.31	38.87
KRH40448	Soybean	cytosol	38.97	38.62
CDY37074	Canola	plastid	35.89	38.29
Bra039305.1-P	Field mustard	plastid	36.11	38.12
CDX74774	Canola	nucleus, plastid	34.51	37.7
KRH48130	Soybean	plastid	37.94	37.64
AT2G45910.1	Thale cress	plastid	35.77	37.53
Bra004947.1-P	Field mustard	nucleus, plastid	34.29	37.45
PGSC0003DMT400000146	Potato	nucleus	38.17	37.44
Zm00001d045230_P001	Maize	cytosol	32.34	37.38
CDY18889	Canola	nucleus, plastid	34.29	37.31
Solyc01g094660.2.1	Tomato	cytosol	38.06	37.25
KRH65013	Soybean	plastid	36.69	36.56
KRH35280	Soybean	cytosol	29.14	36.17
KRG91553	Soybean	cytosol	30.4	36.04
VIT_16s0050g00690.t01	Wine grape	cytosol	34.06	35.48
Bra019576.1-P	Field mustard	nucleus	24.69	34.73
PGSC0003DMT400040840	Potato	cytosol	29.71	33.04
Solyc03g025450.2.1	Tomato	cytosol	29.49	32.78
CDY05898	Canola	cytosol	29.37	32.21
CDY08105	Canola	cytosol	29.49	32.13
Bra018013.1-P	Field mustard	cytosol	29.49	32.13
Zm00001d051399_P002	Maize	cytosol	35.09	32.11
CDX86996	Canola	nucleus	28.91	31.98
AT3G49060.1	Thale cress	cytosol	29.37	31.93
CDY37899	Canola	cytosol	28.8	31.27
Zm00001d045397_P001	Maize	cytosol	24.91	28.8
Zm00001d051875_P001	Maize	mitochondrion	28.34	28.09
Zm00001d053587_P001	Maize	plastid	23.54	27.91
Zm00001d045056_P002	Maize	nucleus	23.77	26.43
Zm00001d053588_P001	Maize	cytosol	21.26	25.8
Zm00001d046364_P001	Maize	cytosol	19.09	25.3
Zm00001d020416_P002	Maize	cytosol	24.8	24.27
Zm00001d052067_P004	Maize	cytosol	21.94	24.21
Zm00001d044293_P007	Maize	cytosol	20.46	23.68
Zm00001d053876_P011	Maize	plastid	18.06	19.41
Zm00001d011210_P001	Maize	plastid	20.0	15.74
Zm00001d003621_P002	Maize	cytosol, plastid	25.49	10.53

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	UniProt:A0A1D6E3I1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR003613
InterPro:IPR013083	InterPro:Kinase-like_dom_sf	ProteinID:ONM15102.1	PFAM:PF04564	PFAM:PF07714	ScanProsite:PS00107
PFscan:PS50011	PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00504	SUPFAM:SSF56112	SUPFAM:SSF57850	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI000221C81A	InterPro:Ubox_domain
EnsemblPlantsGene:Zm00001d002693	EnsemblPlants:Zm00001d002693_P001	EnsemblPlants:Zm00001d002693_T001	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

U-box domain-containing protein 33

Coordinates

chr2:-:19414196..19420375

Molecular Weight (calculated)

97581.7 Da

IEP (calculated)

6.102

GRAVY (calculated)

-0.450

Length

875 amino acids

Sequence
(BLAST)

001: MANAGTGRGG QTPESTHQHT LRTAVSNTRE AAESPPLAVD DKIFVAVPEE LKHGKSNLLW ALHNLARDAS SSRIAIAHVH VPAQMITTNC STVPEEINLS
101: DYRQINILCT KFCHEVNCDI VAIQNDDIAN GVINLISLHG IKKLVVGAAS DKKYSKTMKA PTSNTALKIM EGAASPCKIW FTCKGSLIVV KGGNADTPTV
201: PSSQNTAPLP VFNISSQMRS MMIHNSKDKA SSSNLSMAND MGESRTDVPC SLYENAGDTL LQSFEDVEST FKGKPRRLRS LEDFTVDSGR SQTQNSDSSC
301: PPNDGAASIS RTAVVDNDNI SEVASNMHLS TNNSYDHISP TPHDLDKLKE TLTKIQLLEK EVQEECNKQQ NAERELQSAL QKSKELEKSY MNELRQQKAL
401: KEMLEKQRQE IDVMRRQQEE AYAALYNANE QKVTLEQRIS EIELYVKDKE DELARNKHQL EALQADCDRI QQERDAAIRE ATELHEKNRL GVFAPSEALN
501: TKFSLIELQQ ATQDFNPMFK VGEGGFGSVY KGFLRNTTVA IKLLHPESMQ RQSEFHQEAS VLSTVRHPNL VTLIGTCPEA FGLVYEFFPN GSLEDCLGCK
601: NNTRPLTWQT RTRIIGEMCS ALIFLHSNKP HPVVHGDLKP DHILLDANYS SKLGDFGISR LLIQTNTCST NLYRTTNPRG TFSYMDPEFL TTGELTPRSD
701: VYSFGIIILR LLTGKQPQRI AEIVEDAIEK ENLHSIIDST AGSWPFIQAN QLAHIALRCA ELSRRRRPDL TVDVWKVVEP LMKAASMTAR PLSCTAPSDE
801: TCIPSYFICP ILQEIMRDPY VAADGFTYEG EAIRGWLDSG HSTSPMTNLD LERSLLVPNR ALRSAILEWN QQERQ

Best Arabidopsis Sequence Match ( AT2G45910.1 )
(BLAST)

001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL

Arabidopsis Description

PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.