Factsheet for TraesCS4A01G382700.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G085100.1
TraesCS6B01G117400.1
TraesCSU01G114000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G25160.1	TraesCS6A01G085100.1	AT5G64330.1	16777956
AT4G25160.1	TraesCS6B01G117400.1	AT5G64330.1	16777956
AT4G25160.1	TraesCSU01G114000.1	AT5G64330.1	16777956

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G084400.4	Wheat	cytosol	92.1	91.77
TraesCS4A01G382900.1	Wheat	cytosol	88.62	89.7
HORVU7Hr1G018750.2	Barley	cytosol	85.75	87.0
Os06t0140800-01	Rice	plasma membrane	63.35	65.63
KXG19255	Sorghum	cytosol	61.92	64.06
Zm00001d045397_P001	Maize	cytosol	53.77	59.31
CDY12184	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	29.1	45.94
VIT_16s0013g01920.t01	Wine grape	cytosol	42.63	45.41
KRH56330	Soybean	cytosol, plasma membrane, plastid	41.68	43.55
GSMUA_Achr11P...	Banana	cytosol	41.08	42.93
KRH62634	Soybean	cytosol	41.2	42.47
PGSC0003DMT400048527	Potato	cytosol	41.08	42.45
Solyc03g093450.2.1	Tomato	nucleus	40.96	42.33
GSMUA_Achr5P21060_001	Banana	cytosol	40.36	41.97
Solyc05g051610.1.1	Tomato	cytosol	41.68	41.48
CDY00462	Canola	mitochondrion, plasma membrane	31.38	41.13
Bra012943.1-P	Field mustard	cytosol	35.21	40.95
PGSC0003DMT400018596	Potato	cytosol	41.44	40.85
Bra013868.1-P	Field mustard	plastid	40.84	40.6
CDY34347	Canola	plastid	40.84	40.6
AT4G25160.1	Thale cress	plastid	40.24	40.24
Bra019185.1-P	Field mustard	plastid	38.56	39.85
CDX92680	Canola	plastid	38.56	39.85
CDY11059	Canola	plastid	38.68	39.78
CDY00464	Canola	cytosol	36.53	39.3
CDY02134	Canola	cytosol	36.05	39.04
CDX99935	Canola	cytosol	34.25	38.54
CDY42870	Canola	cytosol	36.53	38.51
TraesCS6A01G018500.1	Wheat	cytosol	31.98	38.47
CDY23058	Canola	cytosol, plastid	36.41	38.38
Bra029318.1-P	Field mustard	cytosol	36.29	38.26
CDY02135	Canola	cytosol	38.56	38.15
Bra012944.1-P	Field mustard	cytosol	37.01	38.15
CDY23059	Canola	cytosol	38.56	37.97
CDX87220	Canola	cytosol, peroxisome, plasma membrane	37.6	37.97
AT5G61560.3	Thale cress	cytosol	37.01	37.91
AT5G61550.2	Thale cress	cytosol	39.04	37.91
Bra029317.1-P	Field mustard	cytosol, nucleus, plastid	38.8	37.89
CDY68766	Canola	cytosol, plastid	35.81	37.75
Bra022543.1-P	Field mustard	plastid	35.69	37.67
AT5G51270.1	Thale cress	cytosol	36.29	37.64
CDY16329	Canola	plastid	35.69	37.63
Bra015198.1-P	Field mustard	cytosol	34.25	37.58
CDY16813	Canola	cytosol	37.13	37.35
CDY00461	Canola	cytosol	35.45	37.28
Bra035920.1-P	Field mustard	cytosol	35.21	37.17
CDY16812	Canola	cytosol	35.33	37.01
CDX91574	Canola	plastid	35.09	36.72
CDY42871	Canola	cytosol	35.93	36.5
TraesCS5A01G542700.1	Wheat	cytosol	34.13	35.36
Bra015196.1-P	Field mustard	cytosol	27.9	35.3
CDY61455	Canola	cytosol	33.89	34.9
CDX87221	Canola	cytosol	29.94	33.97
TraesCS7A01G364200.2	Wheat	cytosol	28.26	30.73
TraesCS3A01G208900.1	Wheat	cytosol	26.23	29.55
TraesCS6A01G182800.1	Wheat	cytosol	24.91	28.49
TraesCS6A01G338300.1	Wheat	cytosol	19.04	27.37
TraesCS5A01G294700.1	Wheat	cytosol	24.91	26.94
TraesCS6A01G346100.2	Wheat	cytosol	25.87	26.34
TraesCS7A01G155200.1	Wheat	cytosol	25.39	26.3
CDY03375	Canola	plastid	40.84	26.29
TraesCS6A01G245500.1	Wheat	cytosol	27.43	25.53
TraesCS1A01G208100.1	Wheat	mitochondrion	23.95	25.09
TraesCS6A01G122700.2	Wheat	cytosol	25.27	24.97
TraesCS7A01G532900.1	Wheat	cytosol	17.48	24.54
TraesCS5A01G203900.1	Wheat	cytosol	23.83	23.83
TraesCS5A01G205800.1	Wheat	cytosol	23.35	23.1
TraesCS7A01G122600.1	Wheat	cytosol	19.88	22.96
TraesCS5A01G294600.1	Wheat	plastid	25.03	22.94
TraesCS2A01G079300.1	Wheat	plastid	21.56	22.78
TraesCS7A01G122700.1	Wheat	nucleus	19.64	22.62
TraesCS4A01G220300.1	Wheat	cytosol	18.2	21.68
TraesCS2A01G391300.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid	18.2	20.62
TraesCS6A01G245400.1	Wheat	nucleus	20.96	18.74

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	Gene3D:3.40.50.620	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR003613
InterPro:IPR013083	InterPro:IPR014729	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF04564	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF29	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220	SMART:SM00504	SUPFAM:SSF52402	SUPFAM:SSF56112
SUPFAM:SSF57850	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS4A01G382700	EnsemblPlants:TraesCS4A01G382700.4	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
TIGR:cd01989	TIGR:cd16655	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:-:660790774..660795650

Molecular Weight (calculated)

91344.7 Da

IEP (calculated)

7.416

GRAVY (calculated)

-0.518

Length

835 amino acids

Sequence
(BLAST)

001: MASPRRRGEE TDTEADVDGD RGGGLRRDGA GDGGPRREHG GHRGEREQEQ QARAQVGPRQ VRARRAGPLP DPACPPAHHH VGNYIPVSQV RDDVASAYRE
101: ELEWQARNML LPYKKMCAQR QVEAEAVLLE SDDVPAAISE EIGKFNIGKL VLGSSSRSIF RRKLKGSKTA TKISECIPSF CTAYVVSKGK LSFVRSATSD
201: ACETPKTISL STVSSPSSRS LSSAPSECAD RNGAAAVLFR QSSRSSQRDH ALANINRRAS PSGSGGSEIS YHADTTLITN SHSIASGAQL SSSSSGDSVY
301: KSFRRDSSPD IPDLQAAVSE IATNLKHSHD QDDLKLQIES MKVKLRHLQK LHECAHTEPV DSTQKLHNNL GIQRVEPEIK LREIDLTEEM VRRLLRRMER
401: EEEEVAEREA QPIQTSSGQK ATEGDGDHQN AGEINTGLKN AGRCLTEYNR YSWEHIQAAT SSFSSDLVIG KGTYGTVYKA KFQHSVAAVK VLNSLEGFGT
501: QQLQQELEVL GKIRHPHLLL LLGACPERGC VVYEYMESGS LDDALHHRRN GTPPLAWYDR VRVAWEVATA VAFLHSARPD PIIHRDLKPA NILLDRNLSS
601: KVGDVGLSTA LLHHSGAGGG GGQQQSTMVR NTTPVGTFCY IDPEYQRTGA VSAKSDVYAL GVVVLQLLTG RTSPLGLAHA VETALEEDGG DSFAEMLDVT
701: AGQWPPEEAR ELAALALQCA EMRRRDRPGL REHILPALER IKDVAARAAR ETKALLLRTA SSSAAPGHFL CPILQEIMED PCVAADGYTY DRKAIETWVS
801: MKDKSPMTNL RLLSKSLIPN HSLRSAIMDW SSKNR

Best Arabidopsis Sequence Match ( AT5G61550.1 )
(BLAST)

001: MEEKKVVRAL SEHLSLPPPP SPSVAVAING KKKSKYVVFW ALEKFIPEGF TDFKLLYVRP PVSYIPTPMG IAVAVSELRE DVVSAYKQEL DWSANEMLRP
101: YKKMFERRKV QVEVLLLDSL EPAAAIAEEI AGTGVTKLVI GMSLRGFFSR KIDMSSLIAT AVPRFCTVYV ISKGKLASVR PSESDASGSI RFERSSSTSG
201: STDSPRLPPE YQDFLSAVSE AQSRVSPFSP ALKHSMGSNA VAQMDTSSSG TDQEEVSTGR GMEIVHSGIE GKKNKDESFS ASFPMGTEAY NSMSWTSKWR
301: DHEDRREMRS SSSSNNHDLV NMDWGAVVPE NYSWVSHTAS HMSDGLLSVH SITDNQVNLN FEIEKLRAEL KHVQEMYAMA QTETVGASKK LTELNQRRFE
401: ESEKLVELKE KEEVAKDTAS KEKQRYEEAM KEAEKVKELM MKEALHRREA EFKAERDARE KDKLQASLVS PGVQYQHYTW EEIAAATSDF AENLKIGIGA
501: YGSVYKCNLH HTTGAVKVLH AGETQLSKQF DQELEILSKI RHPHLVLLLG ACPERGCLVY EYMDNGSLDD RLMLVNDTPP IPWFERFRIA LEVASALVFL
601: HKSKPRPIIH RDLKPGNILL DHNFVSKLGD VGLSTMVNQD DVSSRTIFKQ TSPVGTLCYI DPEYQRTGII SPKSDVYSLG VVILQLITAK PAIAITHMVE
701: EAIGDDAEFM AILDKKAGSW PISDTRELAA LGLCCTEMRR RDRPDLKDQI IPALERLRKV ADKAQNLLSR TPSGPPSHFI CPLLKGVMNE PCVAADGYTY
801: DREAIEEWLR QKDTSPVTNL PLPNKNLIAN YTLYSAIMEW KSNKR

Arabidopsis Description

U-box domain-containing protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4K3J3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.