Factsheet for PGSC0003DMT400075335

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g096010.1.1	Tomato	cytosol	91.96	94.87
PGSC0003DMT400076836	Potato	cytosol	70.32	70.01
PGSC0003DMT400024693	Potato	cytosol	32.46	62.01
KRH05306	Soybean	cytosol	43.57	58.89
CDY67812	Canola	cytosol	51.61	58.74
AT5G12000.1	Thale cress	cytosol	57.75	56.35
Bra008921.1-P	Field mustard	cytosol	57.31	56.16
CDX69713	Canola	cytosol	57.31	56.16
Bra023358.1-P	Field mustard	cytosol	56.73	56.07
CDX97160	Canola	cytosol	57.31	56.0
VIT_04s0008g01360.t01	Wine grape	cytosol, nucleus, plastid	59.65	55.74
CDY24991	Canola	cytosol	56.73	55.11
AT5G26150.2	Thale cress	cytosol	57.16	54.99
CDY05538	Canola	cytosol	56.58	54.97
Bra020547.1-P	Field mustard	cytosol	56.58	54.97
KXG29810	Sorghum	cytosol	52.78	50.07
Zm00001d053588_P001	Maize	cytosol	52.63	49.93
KRH15730	Soybean	cytosol	49.71	49.42
TraesCS6B01G213600.1	Wheat	cytosol	51.46	49.03
HORVU3Hr1G050430.6	Barley	cytosol	53.51	48.8
TraesCS3D01G211800.1	Wheat	cytosol	52.63	48.65
TraesCS3A01G208900.1	Wheat	cytosol	52.49	48.45
TraesCS6D01G172000.1	Wheat	cytosol	51.32	48.41
TraesCS6A01G182800.1	Wheat	cytosol	51.61	48.36
KRH61536	Soybean	cytosol	50.73	48.26
Os02t0218400-01	Rice	plasma membrane	51.32	48.08
KXG32775	Sorghum	cytosol	53.07	47.89
TraesCS3B01G239200.2	Wheat	cytosol	52.49	47.87
GSMUA_Achr2P15770_001	Banana	cytosol	51.32	47.69
Zm00001d044293_P007	Maize	cytosol	52.34	47.35
PGSC0003DMT400035586	Potato	cytosol	54.09	46.6
Os01t0581400-01	Rice	cytosol, plasma membrane	52.05	46.54
GSMUA_Achr8P05660_001	Banana	cytosol	55.56	46.51
HORVU6Hr1G083440.11	Barley	cytosol	51.46	45.3
Os02t0787200-01	Rice	plasma membrane	50.58	44.82
EES05920	Sorghum	cytosol	50.44	44.17
TraesCS6D01G329000.2	Wheat	cytosol	51.02	44.01
EER89364	Sorghum	nucleus	50.44	43.34
Zm00001d045056_P002	Maize	nucleus	49.85	43.33
Zm00001d052067_P004	Maize	cytosol	49.71	42.88
TraesCS6A01G346100.2	Wheat	cytosol	51.02	42.56
CDX91180	Canola	cytosol	56.29	42.54
TraesCS6B01G379600.1	Wheat	cytosol	51.17	42.48
PGSC0003DMT400033499	Potato	cytosol, nucleus, plastid	48.83	42.39
TraesCS7B01G059300.1	Wheat	cytosol	49.56	42.11
TraesCS7A01G155200.1	Wheat	cytosol	49.56	42.06
TraesCS7D01G155500.1	Wheat	cytosol	49.56	42.06
HORVU7Hr1G031830.1	Barley	cytosol	48.98	41.46
PGSC0003DMT400012520	Potato	cytosol	45.03	40.16
PGSC0003DMT400027823	Potato	cytosol	35.53	32.62
Zm00001d011210_P001	Maize	plastid	51.61	31.74
PGSC0003DMT400048527	Potato	cytosol	34.8	29.46
PGSC0003DMT400018596	Potato	cytosol	34.36	27.75
PGSC0003DMT400000146	Potato	nucleus	28.51	21.86
PGSC0003DMT400040840	Potato	cytosol	22.95	19.95

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102593636	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.40.50.620	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR014729	InterPro:Kinase-like_dom_sf
UniProt:M1CUZ7	PFAM:PF00069	PFAM:PF00582	EnsemblPlantsGene:PGSC0003DMG400029298	PGSC:PGSC0003DMG400029298	EnsemblPlants:PGSC0003DMT400075335
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF9	InterPro:Prot_kinase_dom	InterPro:Rossmann-like_a/b/a_fold
SMART:SM00220	SUPFAM:SSF52402	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295D41C	InterPro:UspA
RefSeq:XP_006342500.1	SEG:seg	:	:	:	:

Description

Receptor-like kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400029298]

Coordinates

chr12:-:57812998..57820238

Molecular Weight (calculated)

75834.8 Da

IEP (calculated)

9.369

GRAVY (calculated)

-0.459

Length

684 amino acids

Sequence
(BLAST)

001: MGSQNPGEDS IVVAVDKDKS SSSAVKWAID NLLGNNQSLV LVHVRVKNSP KPTLDSNGGL SDEGTQNVFI PFKAYSARKR IVVKEIVIEN TEASKGLLEY
101: INSHSVSNIV LGASSRSTLG RKYWTHDVPT LVNKAAPEFC SVYVVSKGKQ QSVRPAAKSL PSSVPARQPS SSAWSAPRSS NSGSEDSTRF SYMRSEQKIV
201: ESEKTRGEKG PSIVPIDNLH SPEMTNPYKH ASQPDGNMRY ARISPRSVDM TSENLDFTQV AIRETPMNGS SSYSVDAEMK RLKLELRQTM DMYNAACKEA
301: VMANQAADEL NKWKIEEARK FEQARFAEEA ALAIAETEKA KCRAAIEAAK KAQKMAEIEA QRRKYAELKA KRETEKKKQA MNVRSQNDIR YRKYTIEEIE
401: AATKKFSNAQ KIGEGGYGPV FKGKLDHTPV AIKVLSPDAA QGKKQFQQEV EVLSLIRHPN LVLLLGACPE YGCLVYELMN NGSLEDRLFR KGNTPSIPWE
501: IRFKIAAEIA TGLLFLHQSK PEPLVHRDLK PGNILLDKNY VCKISDVGLA RLVPSSVADC VTQYHMTSAA GTFCYIDPEY QQTGRLETKS DIYSLGVMLL
601: QIITARPPMG LTHHVERAIE KGKFADFLDP TVPNWPVEEA LKFAKLSLKC AELRKKDRPD LGSVVVPELT RLSEFGMSSM PGIG

Best Arabidopsis Sequence Match ( AT5G12000.1 )
(BLAST)

001: MARPHPSDDS HTLVNSTVVA IDKDKNSHFA VRWAVDHLFN MIINSKMILL HVRLKNSNHG GNIDDSELNQ LFVPYRGYCA RKGISMMEVI LDDTDVSKAV
101: LDYVNNNLVT NLVLGSSSKS PFARSLKFTK SHDVASSVLK STPEFCSVYV ISKGKVHSSR TAQRPITNTL VPPRVPSSTF HLPDPDHDRS PRSQRNGRNT
201: VPERYSHENK GFKPVREMHK IPTNGSLDFN YEFRQGKGQR NSTGRSSFSD ESSDVGSMMM MGSIDLSAEN FDMVGGSGSS DESASQSTRD IEAEMKRLKI
301: ELKQTMDMYS SACKEALNAK KKANELNQWK MEEARRFEEA RNAEEAALAV AEMEKAKCRA ALEAAEKAQR MAELEGQRRK QAEMKARRES QEKDRALSAL
401: VQNDVRYRKY SIDEIEVATE RFANNRKIGE GGYGPVYHGT LDHTPVAIKV LRPDAAQGKK QFQQEVEVLS SIRHPHMVLL LGACPEYGCL VYEFMDNGSL
501: EDRLFRRGNS PPLSWRKRFQ IAAEIATALS FLHQAKPEPL VHRDLKPANI LLDKNYVSKI SDVGLARLVP ASVANTVTQY HMTSAAGTFC YIDPEYQQTG
601: KLTTKSDIFS LGIMLLQIIT AKSPMGLAHH VSRAIDKGTF KDMLDPVVPD WPVEEALNFA KLCLRCAELR KRDRPDLGKE IVPELLRLRN LGKDNEPGCH
701: K

Arabidopsis Description

Kinase with adenine nucleotide alpha hydrolases-like domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q0WVJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.