Factsheet for VIT_04s0008g01360.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008921.1-P	Field mustard	cytosol	61.75	64.76
CDX69713	Canola	cytosol	61.75	64.76
CDX97160	Canola	cytosol	61.75	64.57
CDY67812	Canola	cytosol	52.46	63.89
AT5G12000.1	Thale cress	cytosol	60.79	63.48
AT5G26150.2	Thale cress	cytosol	60.93	62.73
KRH05306	Soybean	cytosol	43.31	62.65
Bra023358.1-P	Field mustard	cytosol	59.15	62.57
Bra020547.1-P	Field mustard	cytosol	59.97	62.36
CDY05538	Canola	cytosol	59.97	62.36
CDY24991	Canola	cytosol	59.97	62.36
VIT_09s0002g01830.t01	Wine grape	cytosol	52.32	59.84
PGSC0003DMT400075335	Potato	nucleus	55.74	59.65
Solyc06g043250.2.1	Tomato	cytosol	55.87	59.53
Solyc12g096010.1.1	Tomato	cytosol	53.83	59.43
PGSC0003DMT400076836	Potato	cytosol	55.6	59.24
GSMUA_Achr8P05660_001	Banana	cytosol	62.57	56.06
KRH61536	Soybean	cytosol	54.64	55.63
TraesCS3A01G208900.1	Wheat	cytosol	56.28	55.6
KRH15730	Soybean	cytosol	52.05	55.38
TraesCS3D01G211800.1	Wheat	cytosol	55.74	55.14
Zm00001d053588_P001	Maize	cytosol	54.1	54.92
HORVU3Hr1G050430.6	Barley	cytosol	56.15	54.8
TraesCS3B01G239200.2	Wheat	cytosol	56.01	54.67
KXG29810	Sorghum	cytosol	53.83	54.65
Zm00001d044293_P007	Maize	cytosol	55.74	53.97
KXG32775	Sorghum	cytosol	55.46	53.56
TraesCS6B01G213600.1	Wheat	cytosol	52.46	53.48
VIT_11s0065g00390.t01	Wine grape	cytosol	54.1	53.44
TraesCS6A01G182800.1	Wheat	cytosol	53.14	53.29
TraesCS6D01G172000.1	Wheat	cytosol	52.73	53.24
Os02t0218400-01	Rice	plasma membrane	52.87	53.01
GSMUA_Achr2P15770_001	Banana	cytosol	52.32	52.04
Os01t0581400-01	Rice	cytosol, plasma membrane	54.23	51.9
VIT_04s0008g02910.t01	Wine grape	cytosol	55.33	50.82
Os02t0787200-01	Rice	plasma membrane	52.19	49.48
EES05920	Sorghum	cytosol	52.19	48.91
CDX91180	Canola	cytosol	59.84	48.4
HORVU6Hr1G083440.11	Barley	cytosol	51.09	48.13
Zm00001d045056_P002	Maize	nucleus	51.64	48.03
VIT_09s0054g01060.t01	Wine grape	cytosol	50.82	47.75
EER89364	Sorghum	nucleus	51.64	47.49
Zm00001d052067_P004	Maize	cytosol	51.37	47.41
TraesCS7B01G059300.1	Wheat	cytosol	50.82	46.21
TraesCS6D01G329000.2	Wheat	cytosol	50.0	46.15
TraesCS7D01G155500.1	Wheat	cytosol	50.82	46.15
TraesCS7A01G155200.1	Wheat	cytosol	50.82	46.15
HORVU7Hr1G031830.1	Barley	cytosol	50.68	45.92
TraesCS6A01G346100.2	Wheat	cytosol	50.68	45.24
TraesCS6B01G379600.1	Wheat	cytosol	50.27	44.66
Zm00001d011210_P001	Maize	plastid	53.83	35.43
VIT_11s0016g01830.t01	Wine grape	plastid	33.88	32.25
VIT_16s0013g01920.t01	Wine grape	cytosol	31.83	29.72
VIT_06s0004g04580.t01	Wine grape	cytosol	27.32	23.92
VIT_15s0046g02480.t01	Wine grape	cytosol	28.69	23.84
VIT_16s0050g00690.t01	Wine grape	cytosol	26.09	22.74

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100254330	wikigene:100254330	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.40.50.620
ProteinID:CCB46578	ProteinID:CCB46578.1	ncoils:Coil	UniProt:F6H3P5	EMBL:FN595231	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR014729	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100254330
wikigene:LOC100254330	PFAM:PF00069	PFAM:PF00582	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003
PANTHER:PTHR27003:SF9	InterPro:Prot_kinase_dom	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220	SUPFAM:SSF52402	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002109553	InterPro:UspA	ArrayExpress:VIT_04s0008g01360	EnsemblPlantsGene:VIT_04s0008g01360	EnsemblPlants:VIT_04s0008g01360.t01
RefSeq:XP_002279357	RefSeq:XP_002279357.2	RefSeq:XP_010648363.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:-:1114709..1118921

Molecular Weight (calculated)

81747.8 Da

IEP (calculated)

8.673

GRAVY (calculated)

-0.412

Length

732 amino acids

Sequence
(BLAST)

001: MALHFAFDDG IAPINSTVVA IDKDKNSHYA VRWTIDHLLI NNPQIILIHV RHKYLQHQGY NAGEGGGESE TDAQQLFIAY RGYCARKAIQ LKEIVLDDVD
101: VSRAIIDYIT RNRIKNIVVG ASTKNALTRK FRNYDVSTSI TKSAPDFCSV YVISKGKVVS VRSAQRPVVN TAVPPKLPSP RGLPPQALPD NPELEDVARI
201: QSLKGWRNVG SERVTFERTN NNMRVPRARS APTNLSIDNI DLQRPSTSRD SVSDDLDFST PIRFASVDLS SQDMDFSITS DSGRDSLTPT SAKELAAEMK
301: RLKLELKQTM DMYSTACKEA ITAKQKAKEL HQWRMEEARR FKEARLSEEA ALAMAEMEKA RCKAAIEAAE VAQKLAEKEA QRRRYAELKA SREAEEKARA
401: LTALAHNDVR YRKYAIEEIE VATEKFSQAM KIGEGGYGPV YRGKLDHTPV AIKVLRPDAA QGMRQFQQEI EVLSCMRHPN MVLLLGACPE YGCLVYEYMS
501: NGSLEDRLLR RGDTPSIPWR MRFKIAAEIA TALLFLHQAK PEPFVHRDLK PANILLDRNY VSKISDVGLA RLVPPSVADS VTQYHMTSAA GTFCYIDPEY
601: QQTGMLGTKS DVYSMGIMLL QIITAKPPMG LTHHVRRAIE KGTFADMLDQ TVPDWPVEEA LAFANLALKC SELRKKDRPD LGSVVLPELN RLSGFGMDSS
701: GPDNSSNMFN GYASYTHRSG SHPRLSSTAS QD

Best Arabidopsis Sequence Match ( AT5G26150.2 )
(BLAST)

001: MTMMASPYSS DDIHSPVNST VVAIDKEKHS SYAVRWAVDH LLNMIHNPVM ILVHVRTKNS NHGANLNNDD LNQLFIPYRG YCARKGISMT EVVLDDSDVA
101: KTILDYVNNN LVNNLVLGAS TKNTFARSFM FSKPHEVQSS IMKSTPDFCS VYVISKGGKV QSSRPAQRPI TNTLAPPRVP SSGFLIQSLS DSEQDLIPRV
201: QRSARNKPNE TTYPHNRAAF NTTQKGYKSP INGSMDFNNG FNQAAFQRNP TLQSSFSDES DGGFGVMGSV DLSSQNSMDF YHGASSSSEE SIPQSTKDIE
301: AEMRRLKLEL KQTMDMYSSA CKEALTAKRK ANELNQWKIE EARKFEKARL SEEAALAVAE IEKAKCRTAV EAAEKAQRMA ELEGQRRKQA EMKAVSEEKD
401: KDRAVSALAH NDVRYRKYSI EEIEEATERF ANHRKIGEGG YGPVYNGELD HTPVAIKVLR PDAAQGKKQF QQEVEVLCSI RHPHMVLLLG ACPEYGCLVY
501: EFMENGSLED RLFRTGNSPP LSWRKRFEIA AEIATALSFL HQAKPEPLVH RDLKPANILL DKNYVSKISD VGLARLVPAS IADSVTQFHM TSAAGTFCYI
601: DPEYQQTGML TTKSDVYSLG ILLLQIITGR PPMGLAHQVS RAISKGTFKE MLDPVVPDWP VQEAQSFATL ALKCAELRKR DRPDLGKEVV PHLIRLKNFG
701: NDGDERTNEW I

Arabidopsis Description

protein kinase family protein [Source:TAIR;Acc:AT5G26150]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.