Factsheet for HORVU4Hr1G088650.6

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G542700.1	Wheat	cytosol	81.67	85.11
TraesCS4D01G365900.1	Wheat	cytosol	82.02	84.75
TraesCS4B01G371600.1	Wheat	cytosol	81.31	83.91
HORVU6Hr1G003590.3	Barley	cytosol	45.24	76.46
Os03t0101200-00	Rice	nucleus, peroxisome, plasma membrane	53.45	58.69
HORVU7Hr1G018750.2	Barley	cytosol	32.62	33.29
HORVU7Hr1G086580.2	Barley	cytosol	26.9	29.43
HORVU3Hr1G050430.6	Barley	cytosol	26.19	29.33
HORVU7Hr1G018700.1	Barley	cytosol, plastid	25.48	29.2
HORVU6Hr1G039290.1	Barley	mitochondrion	27.74	28.8
HORVU6Hr1G083440.11	Barley	cytosol	25.95	28.06
HORVU7Hr1G031830.1	Barley	cytosol	25.95	26.98
HORVU1Hr1G053270.1	Barley	cytosol	25.0	26.89
HORVU0Hr1G012820.1	Barley	cytosol, mitochondrion	17.86	25.38
HORVU2Hr1G013130.1	Barley	cytosol, plastid	22.86	23.82
HORVU5Hr1G060580.1	Barley	cytosol	23.45	23.42
HORVU6Hr1G064130.1	Barley	plastid	26.9	23.25
HORVU5Hr1G077700.15	Barley	cytosol, plasma membrane	20.83	22.26
HORVU6Hr1G064110.10	Barley	nucleus	22.02	20.33

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	Gene3D:3.40.50.620	UniProt:A0A287Q393
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:HORVU4Hr1G088650
EnsemblPlants:HORVU4Hr1G088650.6	InterPro:IPR000719	InterPro:IPR003613	InterPro:IPR013083	InterPro:IPR014729	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFAM:PF04564	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51698
PANTHER:PTHR27003	PANTHER:PTHR27003:SF12	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220
SMART:SM00504	SUPFAM:SSF52402	SUPFAM:SSF56112	SUPFAM:SSF57850	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000B485AB8
InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:640685421..640696260

Molecular Weight (calculated)

91502.2 Da

IEP (calculated)

6.196

GRAVY (calculated)

-0.279

Length

840 amino acids

Sequence
(BLAST)

001: MGRTTTSWAD PRSLARPMRP GHVSDPPMAA KEGDGTGAGT VVGLALGGSK SSAYVLQWAL ANFVRDDAAP PAFKLIHVLI PVLAVPTPPP VKNRLPIDDV
101: SSDISVDYLH GLWIKKQEML RGCKDTCDEY KVEAQVLLVE GSDVADTISS LVVQYQIQIL VVGNPSSKNP FTGSSSTSRT TTKICKSVPS FCTAYVVSKD
201: GLSSIYASES ESGSPSGSLV PKGNSESSET EEFITDSSRS DLDDSSGQGL PPSNLASEKL ESCSSVEGFT LYDYLSGNAS VYPDKDRRIT PSTGSERSIS
301: SQSQGSDKVL TKESSLLGSM LSDNKGSDKV PAKENSLLGL MLSDKKNDVS TELEKLKLEL GHIQGAYKLV QDESADASHQ VNELATRRME VEAQLSEIQA
401: RVDKANDDVL EQTAQRLVAE EATTQVKHLT RLEVIQKNRL LAKASKDADR KARLEKLLVL QDDSYWTFTW EEIDNATASL SESLKIGTGS NGTVYKGHLN
501: HLNVAIKVLH CNDSSSTKHF NQELEVLSRI RHPHLVMLLG ACPDKGCLVY EYMENGSLAD RLQLKKGTPP IPWFDRFRIA WEIGSALVFL HSAKPSPIIH
601: RDLKPENVLL NSNLVSKIGD VGLSTLMPPK ETLSNRTVFK KTGLAGTLFY LDPEYQRSGQ VSVKSDTYAL GMVILELLTA RSPIGLPELV ERAVEGGRIT
701: DVLDEGAGEW PVKEAHELAQ LGLKCLEMRS KDRPDLKSVV VVELERLKHI TAGMLELARA LPGLPGPPPS HFMCPILKRV MKDPVLAADG YSYERSAMEM
801: WLCDMDTSPV TKARLRDKKL VANLSLLSAI TSWAARGGGF

Best Arabidopsis Sequence Match ( AT4G25160.1 )
(BLAST)

001: MSRSPDKLAL PPPPPPPPSR TVVVALSGSS KSKYVVTWAI EKFATEGNVG FKLLHIHPMI TSVPTPMGNA IPISEVRDDV VTAYRQEILW QSEEMLKPYT
101: KLFVRRKVAV EVLVIESDNV AAAIAEEVTR DSIDRIVIGG SSRSFFSRKA DICSVISALM PNFCTVYVVS KGKLSCVRPS DSDGNATIRE DGSERTNSSS
201: GSSGPTSDSS DVMSSAHDSQ SRPLSLPVRR MQHFPAIAGQ ASVPMETSSV GSDETRCMSL DAEEARDVSS INRSSTDTTS RWTPRRRDYE ERKEAMSSSS
301: SNREYGNFGT RFSWSGMGVD TTHSRASQQA SNMSDALSEQ SYTDNQVNLN FEVEKLRAEL RHVQEMYAVA QTETFDASRK LGELNQRRLE EAIKLEELKL
401: KEYEARELAE KEKQNFEKAR RDAESMRERA EREIAQRREA ERKSARDTKE KEKLEGTLGS PQLQYQHFAW EEIMAATSSF SEELKIGMGA YGAVYKCNLH
501: HTTAVVKVLQ SAENQLSKQF QQELEILSKI RHPHLVLLLG ACPEQGALVY EYMENGSLED RLFQVNNSPP LPWFERFRIA WEVAAALVFL HKSKPKPIIH
601: RDLKPANILL DHNFVSKVGD VGLSTMVQVD PLSTKFTIYK QTSPVGTLCY IDPEYQRTGR ISSKSDIYSF GMILLQLLTA KPAIALTHFV ESAMDSNDEF
701: LKILDQKAGN WPIEETRELA ALALCCTELR GKDRPDLKDQ ILPALENLKK VAEKARNSFS GVSTQPPTHF ICPLLKDVMN EPCVAADGYT YDRHAIEEWL
801: KEHNTSPMTD SPLHSKNLLP NYTLYTAIME WRSTR

Arabidopsis Description

PUB35U-box domain-containing protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW11]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.