Factsheet for AT5G64330.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024285.1-P	Field mustard	cytosol	89.41	92.0
CDX84515	Canola	cytosol	89.41	91.87
CDX81221	Canola	cytosol	87.4	89.32
CDY18715	Canola	cytosol	86.33	88.95
Bra037773.1-P	Field mustard	cytosol	87.4	88.47
VIT_03s0038g00270.t01	Wine grape	cytosol	71.98	79.67
KRH42114	Soybean	cytosol	70.78	78.57
Solyc10g047530.1.1	Tomato	cytosol	70.91	78.49
PGSC0003DMT400083737	Potato	cytosol	69.03	78.15
Solyc01g105680.2.1	Tomato	nucleus	69.71	77.73
PGSC0003DMT400006173	Potato	cytosol	70.38	77.66
GSMUA_Achr3P20380_001	Banana	cytosol	59.65	77.39
KRH23618	Soybean	cytosol	51.61	76.09
KRH10586	Soybean	cytosol	67.56	75.0
KRH21782	Soybean	cytosol	67.29	74.15
KRH49804	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	71.58	71.49
TraesCS6B01G117400.1	Wheat	cytosol	62.73	63.41
TraesCSU01G114000.1	Wheat	cytosol	62.47	63.32
HORVU6Hr1G015480.1	Barley	cytosol	61.93	63.2
TraesCS6A01G085100.1	Wheat	cytosol	61.93	63.2
Zm00001d016898_P001	Maize	cytosol	61.39	61.15
Os02t0568200-00	Rice	cytosol	61.8	60.5
EES07014	Sorghum	nucleus	62.33	60.16
Zm00001d004440_P001	Maize	cytosol	46.65	54.55
KXG25806	Sorghum	cytosol	45.44	51.83
GSMUA_Achr1P21440_001	Banana	cytosol	42.23	51.81
AT5G10250.2	Thale cress	cytosol	33.65	40.35
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	34.32	38.5
AT2G23050.1	Thale cress	cytosol	24.8	38.46
AT5G03250.1	Thale cress	cytosol	30.43	38.34
AT5G13600.1	Thale cress	cytosol	29.89	37.73
AT5G67440.1	Thale cress	cytosol	29.09	37.48
AT4G37590.1	Thale cress	cytosol	29.09	37.41
AT5G67385.1	Thale cress	cytosol	29.62	36.59
AT3G50840.1	Thale cress	cytosol	27.88	36.56
AT1G67900.2	Thale cress	nucleus	30.56	36.13
AT3G49970.2	Thale cress	extracellular	24.93	36.12
AT4G31820.1	Thale cress	cytosol	27.21	35.55
AT2G14820.2	Thale cress	cytosol	29.76	35.02
AT5G48800.1	Thale cress	cytosol	28.69	34.85
AT5G66560.1	Thale cress	cytosol	30.83	34.43
AT2G30520.1	Thale cress	cytosol	27.35	34.4
AT1G03010.1	Thale cress	cytosol	29.09	34.23
AT3G08660.1	Thale cress	plastid	26.68	34.19
AT3G26490.3	Thale cress	cytosol	26.41	33.5
AT3G44820.1	Thale cress	cytosol	29.22	33.49
AT3G08570.1	Thale cress	plastid	27.61	33.39
AT2G47860.3	Thale cress	plastid	28.42	32.22
AT5G47800.2	Thale cress	cytosol	26.01	28.87

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:836554	UniProt:A0A178UIP8	ProteinID:AED97870.1	EMBL:AF180390
EMBL:AK227884	ArrayExpress:AT5G64330	EnsemblPlantsGene:AT5G64330	RefSeq:AT5G64330	TAIR:AT5G64330	RefSeq:AT5G64330-TAIR-G
EnsemblPlants:AT5G64330.1	TAIR:AT5G64330.1	ProteinID:BAB09864.1	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674
GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605
GO:GO:0009606	GO:GO:0009628	GO:GO:0009638	GO:GO:0009987	GO:GO:0016020	GO:GO:0016567
GO:GO:0019538	InterPro:IPR000210	InterPro:IPR027356	Symbol:NPH3	InterPro:NPH3-like	InterPro:NPH3_dom
RefSeq:NP_568989.1	ProteinID:OAO93708.1	PFAM:PF03000	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF6	UniProt:Q9FMF5	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI0000162934
SEG:seg	:	:	:	:	:

Description

RPT3Root phototropism protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF5]

Coordinates

chr5:+:25727126..25730358

Molecular Weight (calculated)

81877.8 Da

IEP (calculated)

7.479

GRAVY (calculated)

-0.359

Length

746 amino acids

Sequence
(BLAST)

001: MMWESESDGG VGVGGGGGRE YGDGVLSSNK HGGVKTDGFE LRGQSWFVAT DIPSDLLVKI GDMNFHLHKY PLLSRSGKMN RLIYESRDPD PTILILDDLP
101: GGPEAFELAS KFCYGVPVDL TATNISGLRC AAEYLEMTED LEEGNLIFKT EAFLSYVVLS SWRDSILVLK SCEKLSPWAE NLQIVRRCSE SIAWKACSNP
201: KGIRWAYTGK APSPSTTNFA GSSPRWNESK DSSFYCSPSR NTNSQPVPPD WWFEDVSILR IDHFVRVITA IKVKGMRFEL LGAVIMHYAG KWLPGLIKEG
301: GVAIAPAMSS AIGGGLGLGG DEMSISCGSN SSGGSSGPDW KGGLHMVLSA GKTNGHQDSV ACLAGLGISP KDQRMIVESL ISIIPPQKDS VTCSFLLRLL
401: RAANMLKVAP ALITELEKRV GMQFEQATLQ DLLIPGYNNK GETMYDVDLV QRLLEHFLVQ EQTEGSSPSR MSPSPSQSMY ADIPRGNNNN GGGGGGNNQN
501: AKMRVARLVD SYLTEVARDR NLPLTKFQVL AEALPESART CDDGLYRAID SYLKAHPTLS EHERKRLCRV MDCQKLSMDA CMHAAQNERL PLRVVVQVLF
601: SEQVKISNAL ANTSLKESTT LGEAMGTYQP MIPNRKTLIE ATPQSFQEGW AAAKKDINTL KFELETVKTK YVELQNEMEV MQRQFEKTGK VKNTPSSSAW
701: TSGWKKLSKL TKMSGQESHD ISSGGEQAGV DHPPPRKPRR WRNSIS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.