Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81314 | Canola | cytosol | 78.41 | 86.31 |
| CDY18660 | Canola | cytosol | 78.07 | 85.61 |
| Bra037846.1-P | Field mustard | cytosol | 77.72 | 85.55 |
| Bra012166.1-P | Field mustard | cytosol | 83.07 | 85.44 |
| CDY69095 | Canola | cytosol | 82.21 | 84.85 |
| CDY12846 | Canola | cytosol | 81.69 | 83.72 |
| AT2G23050.1 | Thale cress | cytosol | 47.67 | 57.38 |
| VIT_07s0129g00250.t01 | Wine grape | cytosol | 60.79 | 55.96 |
| AT4G37590.1 | Thale cress | cytosol | 55.79 | 55.69 |
| PGSC0003DMT400064174 | Potato | cytosol | 60.28 | 55.57 |
| Solyc02g092480.2.1 | Tomato | cytosol | 59.93 | 55.25 |
| KRH04439 | Soybean | cytosol | 59.59 | 54.85 |
| KRH58085 | Soybean | cytosol | 58.55 | 54.33 |
| KRH58082 | Soybean | cytosol | 58.55 | 53.98 |
| GSMUA_Achr5P01710_001 | Banana | cytosol | 54.06 | 53.87 |
| KRH04442 | Soybean | cytosol | 57.34 | 52.7 |
| PGSC0003DMT400038537 | Potato | cytosol | 56.48 | 52.15 |
| Solyc03g044090.2.1 | Tomato | cytosol | 55.96 | 51.43 |
| GSMUA_Achr4P10900_001 | Banana | cytosol | 48.53 | 50.45 |
| EER91236 | Sorghum | cytosol | 53.71 | 49.13 |
| TraesCS4A01G236100.1 | Wheat | cytosol | 53.37 | 48.74 |
| Os12t0583500-01 | Rice | cytosol, plasma membrane | 53.54 | 48.59 |
| TraesCS4B01G078900.3 | Wheat | cytosol | 53.2 | 48.58 |
| TraesCS4D01G077700.3 | Wheat | cytosol | 52.68 | 48.11 |
| Os03t0609800-02 | Rice | cytosol | 52.68 | 48.11 |
| Zm00001d033344_P001 | Maize | cytosol | 52.68 | 48.03 |
| Os03t0205700-01 | Rice | cytosol | 49.91 | 47.77 |
| TraesCS4D01G256700.1 | Wheat | cytosol | 49.57 | 47.36 |
| TraesCS4B01G256600.1 | Wheat | cytosol | 49.4 | 47.27 |
| TraesCS4A01G048200.1 | Wheat | cytosol | 49.22 | 47.03 |
| AT2G14820.2 | Thale cress | cytosol | 51.47 | 47.0 |
| Zm00001d013741_P001 | Maize | cytosol | 52.16 | 46.97 |
| TraesCS5A01G070700.1 | Wheat | cytosol | 50.43 | 46.95 |
| TraesCS5D01G082800.1 | Wheat | cytosol | 50.43 | 46.95 |
| GSMUA_Achr10P... | Banana | cytosol | 46.11 | 46.92 |
| TraesCS5B01G076500.1 | Wheat | cytosol | 50.26 | 46.86 |
| OQU93039 | Sorghum | cytosol | 49.22 | 46.8 |
| GSMUA_Achr7P26250_001 | Banana | cytosol | 50.43 | 46.79 |
| HORVU4Hr1G069760.10 | Barley | cytosol | 49.05 | 46.41 |
| HORVU5Hr1G018480.1 | Barley | cytosol | 50.09 | 46.03 |
| OQU79444 | Sorghum | cytosol | 50.78 | 45.65 |
| Zm00001d048138_P007 | Maize | cytosol | 49.05 | 45.51 |
| GSMUA_Achr2P13430_001 | Banana | cytosol | 52.68 | 45.45 |
| AT4G31820.1 | Thale cress | cytosol | 44.56 | 45.18 |
| Zm00001d030864_P001 | Maize | cytosol | 49.4 | 44.62 |
| AT1G67900.2 | Thale cress | nucleus | 40.76 | 37.4 |
| Zm00001d028075_P010 | Maize | endoplasmic reticulum | 48.36 | 34.7 |
| AT3G26490.3 | Thale cress | cytosol | 34.54 | 34.01 |
| AT5G03250.1 | Thale cress | cytosol | 33.85 | 33.11 |
| AT5G13600.1 | Thale cress | cytosol | 32.12 | 31.47 |
| AT3G50840.1 | Thale cress | cytosol | 30.92 | 31.46 |
| AT3G49970.2 | Thale cress | extracellular | 27.29 | 30.68 |
| AT5G67385.1 | Thale cress | cytosol | 31.61 | 30.3 |
| AT1G30440.1 | Thale cress | cytosol, mitochondrion, nucleus | 34.37 | 29.92 |
| AT5G64330.1 | Thale cress | cytosol | 37.48 | 29.09 |
| AT2G30520.1 | Thale cress | cytosol | 29.53 | 28.84 |
| AT5G48800.1 | Thale cress | cytosol | 30.22 | 28.5 |
| AT1G03010.1 | Thale cress | cytosol | 31.09 | 28.39 |
| AT5G66560.1 | Thale cress | cytosol | 32.64 | 28.29 |
| AT5G47800.2 | Thale cress | cytosol | 32.82 | 28.27 |
| AT3G08660.1 | Thale cress | plastid | 27.98 | 27.84 |
| AT3G08570.1 | Thale cress | plastid | 29.36 | 27.55 |
| AT5G10250.2 | Thale cress | cytosol | 29.36 | 27.33 |
| AT3G44820.1 | Thale cress | cytosol | 29.19 | 25.96 |
| AT2G47860.3 | Thale cress | plastid | 29.02 | 25.53 |
Protein Annotations
| Gene3D:3.30.710.10 | MapMan:35.1 | EntrezGene:836880 | ProteinID:AED98344.1 | ProteinID:ANM69406.1 | ArrayExpress:AT5G67440 |
| EnsemblPlantsGene:AT5G67440 | RefSeq:AT5G67440 | TAIR:AT5G67440 | RefSeq:AT5G67440-TAIR-G | EnsemblPlants:AT5G67440.1 | TAIR:AT5G67440.1 |
| EMBL:AY054694 | EMBL:AY128721 | Unigene:At.19960 | ProteinID:BAB09029.1 | InterPro:BTB/POZ_dom | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006464 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009605 | GO:GO:0009606 | GO:GO:0009628 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009958 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 |
| GO:GO:0071944 | InterPro:IPR000210 | InterPro:IPR027356 | InterPro:NPH3_dom | Symbol:NPY3 | RefSeq:NP_001331087.1 |
| RefSeq:NP_201545.1 | PFAM:PF00651 | PFAM:PF03000 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008011 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50097 | PFscan:PS51649 |
| PANTHER:PTHR32370 | PANTHER:PTHR32370:SF26 | UniProt:Q9FN09 | InterPro:SKP1/BTB/POZ_sf | SUPFAM:SSF54695 | UniParc:UPI000009CC4A |
| SEG:seg | : | : | : | : | : |
Description
NPY3BTB/POZ domain-containing protein NPY3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN09]
Coordinates
chr5:-:26912707..26916453
Molecular Weight (calculated)
64768.7 Da
IEP (calculated)
4.850
GRAVY (calculated)
-0.404
Length
579 amino acids
Sequence
(BLAST)
(BLAST)
001: MKFMKLGSKP DSFQSDEDCV RYVATELATD VVVIVGDVKF HLHKFPLLSK SARLQKLIAT TTTDEQSDDD EIRIPDIPGG PPAFEICAKF CYGMAVTLNA
101: YNVVAVRCAA EYLEMYESIE NGNLVYKMEV FLNSSVLRSW KDSIIVLQTT RSFYPWSEDV KLDVRCLESI ALKAAMDPAR VDWSYTYNRR KLLPPEMNNN
201: SVPRDWWVED LAELSIDLFK RVVSTIRRKG GVLPEVIGEA LEVYAAKRIP GFMIQNDDND DEEDVMEQRS LLETLVSMLP SEKQSVSCGF LIKLLKSSVS
301: FECGEEERKE LSRRIGEKLE EANVGDLLIR APEGGETVYD IDIVETLIDE FVTQTEKRDE LDCSDDINDS SKANVAKLID GYLAEISRIE TNLSTTKFIT
401: IAEKVSTFPR QSHDGVYRAI DMFLKQHPGI TKSEKKSSSK LMDCRKLSPE ACAHAVQNER LPLRVVVQIL FFEQVRATTK PSLPPSGSHG SSRTTTEEEC
501: ESVTATEETT TTTRDKTSSS EKTKAKGVVM SRIFSKLWTG KDKDGVGDVS SSDTSESPGS VTTVGDKSTP STRRRRSSS
101: YNVVAVRCAA EYLEMYESIE NGNLVYKMEV FLNSSVLRSW KDSIIVLQTT RSFYPWSEDV KLDVRCLESI ALKAAMDPAR VDWSYTYNRR KLLPPEMNNN
201: SVPRDWWVED LAELSIDLFK RVVSTIRRKG GVLPEVIGEA LEVYAAKRIP GFMIQNDDND DEEDVMEQRS LLETLVSMLP SEKQSVSCGF LIKLLKSSVS
301: FECGEEERKE LSRRIGEKLE EANVGDLLIR APEGGETVYD IDIVETLIDE FVTQTEKRDE LDCSDDINDS SKANVAKLID GYLAEISRIE TNLSTTKFIT
401: IAEKVSTFPR QSHDGVYRAI DMFLKQHPGI TKSEKKSSSK LMDCRKLSPE ACAHAVQNER LPLRVVVQIL FFEQVRATTK PSLPPSGSHG SSRTTTEEEC
501: ESVTATEETT TTTRDKTSSS EKTKAKGVVM SRIFSKLWTG KDKDGVGDVS SSDTSESPGS VTTVGDKSTP STRRRRSSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.