Factsheet for AT5G10250.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 3
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69851	Canola	cytosol	80.23	79.21
Bra009047.1-P	Field mustard	cytosol	80.23	79.21
CDX96986	Canola	cytosol	77.33	76.84
VIT_00s1395g00010.t01	Wine grape	cytosol	47.11	62.74
VIT_00s0665g00050.t01	Wine grape	cytosol	50.0	62.08
KRH59336	Soybean	cytosol	56.11	55.4
KRH43181	Soybean	cytosol	55.63	55.27
PGSC0003DMT400018688	Potato	cytosol	52.89	52.56
Solyc05g051580.2.1	Tomato	cytosol	52.57	52.4
AT5G64330.1	Thale cress	cytosol	40.35	33.65
AT3G49970.2	Thale cress	extracellular	26.37	31.84
AT5G13600.1	Thale cress	cytosol	29.42	30.96
AT2G23050.1	Thale cress	cytosol	23.63	30.56
AT5G67385.1	Thale cress	cytosol	29.1	29.97
AT5G03250.1	Thale cress	cytosol	28.46	29.9
AT5G67440.1	Thale cress	cytosol	27.33	29.36
AT4G31820.1	Thale cress	cytosol	26.85	29.25
AT1G03010.1	Thale cress	cytosol	29.74	29.18
AT3G50840.1	Thale cress	cytosol	26.69	29.17
AT2G14820.2	Thale cress	cytosol	29.42	28.86
AT5G48800.1	Thale cress	cytosol	27.97	28.34
AT4G37590.1	Thale cress	cytosol	26.37	28.28
AT3G08570.1	Thale cress	plastid	27.97	28.2
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	29.9	27.97
AT3G26490.3	Thale cress	cytosol	26.21	27.72
AT2G30520.1	Thale cress	cytosol	26.37	27.66
AT3G08660.1	Thale cress	plastid	25.72	27.49
AT2G47860.3	Thale cress	plastid	28.94	27.36
AT1G67900.2	Thale cress	nucleus	27.33	26.94
AT3G44820.1	Thale cress	cytosol	27.49	26.27
AT5G66560.1	Thale cress	cytosol	27.97	26.05
AT5G47800.2	Thale cress	cytosol	24.12	22.32

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:830889	UniProt:A0A1P8BAS4	ProteinID:ANM68682.1	ArrayExpress:AT5G10250
EnsemblPlantsGene:AT5G10250	RefSeq:AT5G10250	TAIR:AT5G10250	RefSeq:AT5G10250-TAIR-G	EnsemblPlants:AT5G10250.2	InterPro:BTB/POZ_dom
ncoils:Coil	Symbol:DOT3	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR027356	InterPro:NPH3_dom	RefSeq:NP_001330410.1	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF37	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI0001BA98F6	SEG:seg

Description

DOT3Phototropic-responsive NPH3 family protein [Source:TAIR;Acc:AT5G10250]

Coordinates

chr5:-:3216881..3219436

Molecular Weight (calculated)

71681.1 Da

IEP (calculated)

7.750

GRAVY (calculated)

-0.496

Length

622 amino acids

Sequence
(BLAST)

001: MNSVSAAERL KSFGDAGPVC NKSIIFPSRV VTLANSFEKK DRSWYVKSQI PTDLSIQVND ITFKAHKFPL ISKCGYISSI ELKPSTSENG YHLKLENFPG
101: GADTFETILK FCYNLPLDLN PLNVAPLRCA SEYLYMTEEF EAGNLISKTE AFITFVVLAS WRDTLTVLRS CTNLSPWAEN LQIVRRCCDL LAWKACNDNN
201: IPEDVVDRNE RCLYNDIATL DIDHFMRVIT TMKARRAKPQ ITGKIIMKYA DNFLPVINDD LEGIKGYGLG KNELQFSVNR GRMEESNSLG CQEHKETIES
301: LVSVLPPQSG AVSCHFLLRM LKTSIVYSAS PALISDLEKR VGMALEDANV CDLLIPNFKN EEQQERVSSP EVYTIYNVDV VHRIFEFFLM HEQQQVLGKP
401: SISKLLDNYL AEIAKDPYLP ITKFQVLAEM LPENAWKCHD GLYRAIDMFL KTHPSLSDHD RRRLCKTMNC EKLSLDACLH AAQNDRLPLR TIVQINTQVL
501: FSEQVKMRMM MQDKLPEKEE ENSGGREDKR MSRDNEIIKT LKEELENVKK KMSELQSDYN ELQQEYERLS SKQKSSHNWG LRWQKVKKSF QTKREDEETR
601: ERTRRRSSTG QRTSFRRRMS MS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.