Factsheet for Solyc05g051580.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400018688	Potato	cytosol	94.55	94.25
VIT_00s1395g00010.t01	Wine grape	cytosol	51.12	68.31
VIT_00s0665g00050.t01	Wine grape	cytosol	54.65	68.06
KRH43181	Soybean	cytosol	56.25	56.07
KRH59336	Soybean	cytosol	55.45	54.92
AT5G10250.2	Thale cress	cytosol	52.4	52.57
CDX69851	Canola	cytosol	53.04	52.54
Bra009047.1-P	Field mustard	cytosol	52.88	52.38
CDX96986	Canola	cytosol	50.8	50.64
Solyc01g105680.2.1	Tomato	nucleus	45.67	42.6
Solyc10g047530.1.1	Tomato	cytosol	44.71	41.39
Solyc02g021640.2.1	Tomato	nucleus	33.49	33.23
Solyc09g061250.2.1	Tomato	cytosol	31.57	32.45
Solyc09g048980.2.1	Tomato	cytosol	26.92	31.82
Solyc09g007820.1.1	Tomato	cytosol	30.13	31.49
Solyc02g090070.2.1	Tomato	nucleus	32.85	31.49
Solyc01g098820.2.1	Tomato	cytosol, extracellular	27.72	31.23
Solyc02g092560.2.1	Tomato	cytosol, nucleus	29.81	31.21
Solyc05g013570.2.1	Tomato	nucleus	30.29	30.98
Solyc07g043130.2.1	Tomato	cytosol	28.37	30.73
Solyc08g006870.2.1	Tomato	cytosol	29.81	30.24
Solyc01g107180.2.1	Tomato	cytosol	30.13	30.03
Solyc10g049660.1.1	Tomato	cytosol	29.17	29.79
Solyc09g074630.2.1	Tomato	cytosol	24.2	29.55
Solyc11g066730.1.1	Tomato	cytosol	29.65	29.32
Solyc02g092480.2.1	Tomato	cytosol	29.17	28.98
Solyc03g044090.2.1	Tomato	cytosol	29.01	28.73
Solyc02g064720.2.1	Tomato	cytosol	27.72	28.59

Protein Annotations

EnsemblPlants:Solyc05g051580.2.1	EnsemblPlantsGene:Solyc05g051580.2	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR32370	PANTHER:PTHR32370:SF37	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	SEG:seg
SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI00027658F6	UniProt:K4C1I9	MapMan:35.1	:

Description

BTB/POZ domain-containing protein DOT3 [Source:Projected from Arabidopsis thaliana (AT5G10250) UniProtKB/Swiss-Prot;Acc:Q9LFU0]

Coordinates

chr5:+:61949533..61954754

Molecular Weight (calculated)

71448.4 Da

IEP (calculated)

6.466

GRAVY (calculated)

-0.458

Length

624 amino acids

Sequence
(BLAST)

001: MQKLILDEQE GTSDHPESNE SHHQVHDDQL VVVPTMLNAI ADGFVKKEKS WSATSQLPSD LSIRVEDITF YIHKYPLIAR CGYINQIELH EPQNSHLGYD
101: IKLEKFPGGS ETFETILKFC YGLPISLNPA NVAALRCGSE YLEMTEAMEE GNLISKTEAF FTFVALSSWN DTIAVLKSCE RLSPWAENLQ IVRRCCDSIA
201: WKIFRENSTA GEIITNEGTW WFDDVATLRI DFFMRIITAV RVKGVKPEII GSCIMNYGEK CLPCMYGDTR GMDCKTSTNR RNDSQWSITS GRIGETSIGQ
301: NKEQRTIIES LISILPPQKE TVSCKFLLRL LKISIVYAAS PALISELEKR IGMVLENAST NDLLIPTYAV GDQTINSNEE QTIHNIDVVQ RILDYFLMYE
401: QQKLQQQELK STTLNISKLF DSYLAEIARD PNVSITKFRV LAESLPRHAR TCHDGLYRAI DTYLKTHPSL SEHDRRRLCK IMDCGKLSLD GCMHAAQNER
501: LPMRIIIQVL LSEQVKMRAA VHGKDITESD DNSDKENRWS STKNEVKSLR EELENVKIQM AELHRDYSEL QQEYEKTNNK HRSPWTSGWR KMKKSALFIR
601: KMIEDETQEG EHKVKPGRRT QSIS

Best Arabidopsis Sequence Match ( AT5G10250.2 )
(BLAST)

001: MNSVSAAERL KSFGDAGPVC NKSIIFPSRV VTLANSFEKK DRSWYVKSQI PTDLSIQVND ITFKAHKFPL ISKCGYISSI ELKPSTSENG YHLKLENFPG
101: GADTFETILK FCYNLPLDLN PLNVAPLRCA SEYLYMTEEF EAGNLISKTE AFITFVVLAS WRDTLTVLRS CTNLSPWAEN LQIVRRCCDL LAWKACNDNN
201: IPEDVVDRNE RCLYNDIATL DIDHFMRVIT TMKARRAKPQ ITGKIIMKYA DNFLPVINDD LEGIKGYGLG KNELQFSVNR GRMEESNSLG CQEHKETIES
301: LVSVLPPQSG AVSCHFLLRM LKTSIVYSAS PALISDLEKR VGMALEDANV CDLLIPNFKN EEQQERVSSP EVYTIYNVDV VHRIFEFFLM HEQQQVLGKP
401: SISKLLDNYL AEIAKDPYLP ITKFQVLAEM LPENAWKCHD GLYRAIDMFL KTHPSLSDHD RRRLCKTMNC EKLSLDACLH AAQNDRLPLR TIVQINTQVL
501: FSEQVKMRMM MQDKLPEKEE ENSGGREDKR MSRDNEIIKT LKEELENVKK KMSELQSDYN ELQQEYERLS SKQKSSHNWG LRWQKVKKSF QTKREDEETR
601: ERTRRRSSTG QRTSFRRRMS MS

Arabidopsis Description

DOT3Phototropic-responsive NPH3 family protein [Source:TAIR;Acc:AT5G10250]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.