Factsheet for Solyc01g107180.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400066161	Potato	cytosol	96.49	96.49
Solyc10g049660.1.1	Tomato	cytosol	74.28	76.1
VIT_03s0091g00680.t01	Wine grape	cytosol	71.89	72.12
KRH35678	Soybean	cytosol	70.45	70.67
KRG91101	Soybean	mitochondrion	66.77	66.35
CDX81462	Canola	cytosol	63.1	65.51
CDY37223	Canola	cytosol	62.62	65.01
Bra039820.1-P	Field mustard	cytosol	65.02	64.91
Solyc02g092480.2.1	Tomato	cytosol	64.54	64.33
CDY50369	Canola	cytosol	52.4	63.94
AT2G14820.2	Thale cress	cytosol	63.58	62.78
Solyc03g044090.2.1	Tomato	cytosol	60.7	60.32
GSMUA_Achr4P10900_001	Banana	cytosol	52.56	59.07
EER91236	Sorghum	cytosol	59.27	58.61
TraesCS4A01G236100.1	Wheat	cytosol	58.95	58.2
TraesCS4B01G078900.3	Wheat	cytosol	58.79	58.04
Zm00001d013741_P001	Maize	cytosol	59.58	58.01
GSMUA_Achr5P01710_001	Banana	cytosol	53.83	58.0
Zm00001d033344_P001	Maize	cytosol	58.63	57.8
TraesCS4D01G077700.3	Wheat	cytosol	58.31	57.57
Os03t0609800-02	Rice	cytosol	57.35	56.62
Os12t0583500-01	Rice	cytosol, plasma membrane	57.35	56.27
TraesCS5B01G076500.1	Wheat	cytosol	55.75	56.2
OQU93039	Sorghum	cytosol	54.47	55.99
TraesCS5D01G082800.1	Wheat	cytosol	55.11	55.47
TraesCS5A01G070700.1	Wheat	cytosol	54.95	55.31
Os03t0205700-01	Rice	cytosol	52.72	54.55
OQU79444	Sorghum	cytosol	56.07	54.5
HORVU5Hr1G018480.1	Barley	cytosol	54.79	54.44
TraesCS4B01G256600.1	Wheat	cytosol	52.56	54.38
TraesCS4D01G256700.1	Wheat	cytosol	52.4	54.13
TraesCS4A01G048200.1	Wheat	cytosol	52.4	54.13
HORVU4Hr1G069760.10	Barley	cytosol	52.88	54.09
Zm00001d048138_P007	Maize	cytosol	53.51	53.69
Zm00001d030864_P001	Maize	cytosol	54.63	53.35
GSMUA_Achr10P...	Banana	cytosol	48.24	53.08
GSMUA_Achr7P26250_001	Banana	cytosol	52.88	53.04
GSMUA_Achr2P13430_001	Banana	cytosol	55.11	51.42
Solyc08g006870.2.1	Tomato	cytosol	46.81	47.64
Solyc05g013570.2.1	Tomato	nucleus	42.01	43.11
Zm00001d028075_P010	Maize	endoplasmic reticulum	52.88	41.02
Solyc02g021640.2.1	Tomato	nucleus	34.98	34.82
Solyc10g047530.1.1	Tomato	cytosol	36.42	33.83
Solyc01g105680.2.1	Tomato	nucleus	36.1	33.78
Solyc09g061250.2.1	Tomato	cytosol	31.79	32.78
Solyc09g007820.1.1	Tomato	cytosol	31.15	32.66
Solyc02g092560.2.1	Tomato	cytosol, nucleus	30.83	32.38
Solyc02g090070.2.1	Tomato	nucleus	32.91	31.64
Solyc05g051580.2.1	Tomato	cytosol	30.03	30.13
Solyc09g048980.2.1	Tomato	cytosol	25.4	30.11
Solyc07g043130.2.1	Tomato	cytosol	27.16	29.51
Solyc02g064720.2.1	Tomato	cytosol	28.43	29.42
Solyc09g074630.2.1	Tomato	cytosol	23.48	28.77
Solyc11g066730.1.1	Tomato	cytosol	27.96	27.73
Solyc01g098820.2.1	Tomato	cytosol, extracellular	24.44	27.62

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_NPY2	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0009605	GO:GO:0009606	GO:GO:0009628	GO:GO:0009958
InterPro:IPR000210	InterPro:IPR027356	UniProt:K4B2T5	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000
PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF4	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695
EnsemblPlantsGene:Solyc01g107180.2	EnsemblPlants:Solyc01g107180.2.1	UniParc:UPI0002767C70	SEG:seg	:	:

Description

No Description!

Coordinates

chr1:+:94805957..94812536

Molecular Weight (calculated)

69316.7 Da

IEP (calculated)

6.962

GRAVY (calculated)

-0.336

Length

626 amino acids

Sequence
(BLAST)

001: MKFMKLGSKP DNFQTDGNNV RYVASELASD IAINVGDVKF YLHKFPLLSK SATLQKLVSN ASEGNSDEVD IHDIPGGPSA FEICAKFCYG MTVTLNAYNV
101: ISTRCAAEYL GMNESLEKGN LIYKIDVFLN SSIFRSWKDS IIVLQTTKSQ SRMCEELKLT SHCIDAVASR ASVDVSRVDW SYTYNRKKLP EENGNDPNLN
201: GIRCRMVPKD WWVEDLCELE VDLYKRVVIT IKNKGIVSSE AIGEAAKAYA YRRFPGFNKG AFQFNDVSKC RPILDTVVWL LPSEKGCVSC SFLFKLLKAS
301: ISLDSGETVK AELVKRIGQQ LEESSVNDLL IRAADGEGTM YDAHVVQKIL EAFMMRDKDS EPQLEDEDEI QEVRKPGILS EASKLMVAKL VDGYLTEIAR
401: DPNLPISTFV GLAEMVSNFP RPGHDGIYRA IDMYLKEHPG ISKSERKRIC KLMDCKKLSV DACMHAVQNE RLPLRVVVQV LFFEQVRANA SSGSSTPDLP
501: KAIRDLNSTS YGSSRSATTN TEEDWDAAAS AEELRALRGE LAALRMGNGG TNDKVNVIDA KSHADRAAMS KMKGLLMSKR LFSKIWSNKG GQGENSGSDS
601: SESLGSANNL EEAKSTPSRK VRHSVS

Best Arabidopsis Sequence Match ( AT2G14820.1 )
(BLAST)

001: MKFMKIGSKL DSFKTDGNNV RYVENELASD ISVDVEGSRF CLHKFPLLSK CACLQKLLSS TDKNNIDDID ISGIPGGPTA FETCAKFCYG MTVTLSAYNV
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS

Arabidopsis Description

NPY2BTB/POZ domain-containing protein NPY2 [Source:UniProtKB/Swiss-Prot;Acc:O80970]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.