Factsheet for GSMUA_Achr5P01710_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P13430_001	Banana	cytosol	73.15	63.34
GSMUA_Achr4P10900_001	Banana	cytosol	58.52	61.04
VIT_07s0129g00250.t01	Wine grape	cytosol	64.03	59.14
CDX81314	Canola	cytosol	51.98	57.41
GSMUA_Achr4P01950_001	Banana	cytosol	39.93	56.86
Os03t0609800-02	Rice	cytosol	61.96	56.78
Bra037846.1-P	Field mustard	cytosol	51.29	56.65
CDY18660	Canola	cytosol	51.29	56.44
EER91236	Sorghum	cytosol	61.27	56.24
Zm00001d033344_P001	Maize	cytosol	61.45	56.22
TraesCS5B01G076500.1	Wheat	cytosol	59.72	55.88
TraesCS5D01G082800.1	Wheat	cytosol	59.38	55.47
TraesCS5A01G070700.1	Wheat	cytosol	59.21	55.31
TraesCS4B01G078900.3	Wheat	cytosol	60.24	55.2
GSMUA_Achr10P...	Banana	cytosol	54.04	55.18
Os12t0583500-01	Rice	cytosol, plasma membrane	60.59	55.17
KRH04439	Soybean	cytosol	59.72	55.17
TraesCS4A01G236100.1	Wheat	cytosol	60.07	55.05
TraesCS4D01G077700.3	Wheat	cytosol	60.07	55.05
KRH58085	Soybean	cytosol	59.04	54.97
VIT_03s0091g00680.t01	Wine grape	cytosol	58.69	54.65
PGSC0003DMT400066161	Potato	cytosol	58.86	54.63
PGSC0003DMT400064174	Potato	cytosol	58.86	54.46
HORVU5Hr1G018480.1	Barley	cytosol	59.04	54.44
Bra032187.1-P	Field mustard	cytosol	44.75	54.28
KRH35678	Soybean	cytosol	58.18	54.17
Solyc02g092480.2.1	Tomato	cytosol	58.52	54.14
AT5G67440.1	Thale cress	cytosol	53.87	54.06
GSMUA_Achr7P26250_001	Banana	cytosol	58.0	54.01
Solyc01g107180.2.1	Tomato	cytosol	58.0	53.83
KRH58082	Soybean	cytosol	58.18	53.82
Bra012166.1-P	Field mustard	cytosol	51.98	53.64
CDY38923	Canola	cytosol	43.89	53.57
Zm00001d013741_P001	Maize	cytosol	59.21	53.5
CDY69095	Canola	cytosol	51.64	53.48
KRH04442	Soybean	cytosol	57.66	53.17
OQU79444	Sorghum	cytosol	58.86	53.11
CDY12846	Canola	cytosol	51.64	53.1
CDX89539	Canola	cytosol	43.72	53.03
PGSC0003DMT400013928	Potato	cytosol	55.42	52.79
Zm00001d030864_P001	Maize	cytosol	58.0	52.57
Solyc10g049660.1.1	Tomato	cytosol	55.25	52.54
CDX72639	Canola	cytosol	52.15	52.42
AT2G23050.1	Thale cress	cytosol	43.37	52.39
CDY29566	Canola	cytosol	51.98	52.25
Bra010603.1-P	Field mustard	cytosol	51.64	52.17
PGSC0003DMT400038537	Potato	cytosol	56.28	52.15
Bra017837.1-P	Field mustard	cytosol	51.81	52.08
CDY44035	Canola	cytosol	51.29	51.83
AT4G37590.1	Thale cress	cytosol	51.46	51.55
CDY22422	Canola	cytosol	50.95	51.48
Solyc03g044090.2.1	Tomato	cytosol	55.25	50.95
KRG91101	Soybean	mitochondrion	55.08	50.79
CDX81462	Canola	cytosol	52.15	50.25
CDY37223	Canola	cytosol	51.81	49.92
Bra039820.1-P	Field mustard	cytosol	52.84	48.96
AT2G14820.2	Thale cress	cytosol	52.67	48.27
CDY50369	Canola	cytosol	42.34	47.95
GSMUA_Achr3P04740_001	Banana	cytosol	48.36	47.63
GSMUA_Achr10P...	Banana	cytosol	38.38	39.61
GSMUA_Achr3P20380_001	Banana	cytosol	38.04	38.43
GSMUA_Achr8P16390_001	Banana	cytosol	34.42	38.31
GSMUA_Achr5P02440_001	Banana	cytosol	37.01	37.52
GSMUA_Achr9P26110_001	Banana	cytosol	38.9	37.29
GSMUA_Achr2P02890_001	Banana	cytosol	35.97	37.06
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	31.84	36.63
GSMUA_Achr6P30010_001	Banana	cytosol	34.25	36.31
GSMUA_Achr3P12020_001	Banana	cytosol	34.08	36.26
GSMUA_Achr3P14590_001	Banana	cytosol	35.46	35.95
GSMUA_Achr5P00550_001	Banana	cytosol	38.55	35.61
GSMUA_Achr4P31620_001	Banana	cytosol	35.97	35.01
GSMUA_AchrUn_...	Banana	cytosol	24.96	34.12
GSMUA_Achr9P26440_001	Banana	cytosol	33.22	33.16
GSMUA_Achr1P21440_001	Banana	cytosol	34.08	32.57
GSMUA_Achr6P27970_001	Banana	cytosol	28.23	31.72
GSMUA_Achr7P26300_001	Banana	cytosol	32.01	31.42
GSMUA_Achr8P04840_001	Banana	cytosol	30.98	30.61
GSMUA_Achr7P21950_001	Banana	plastid	29.43	30.37
GSMUA_Achr8P30170_001	Banana	plastid	28.4	29.57
GSMUA_Achr10P...	Banana	cytosol	27.71	29.11
GSMUA_Achr1P11260_001	Banana	plastid	28.4	28.8
GSMUA_Achr11P...	Banana	cytosol, plastid	27.37	27.46
GSMUA_Achr5P29690_001	Banana	cytosol, plastid	28.06	27.17
GSMUA_Achr3P25690_001	Banana	nucleus	29.09	14.15

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_NPY2	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0009605	GO:GO:0009606	GO:GO:0009628	GO:GO:0009958
EnsemblPlantsGene:GSMUA_Achr5G01710_001	EnsemblPlants:GSMUA_Achr5P01710_001	EnsemblPlants:GSMUA_Achr5T01710_001	InterPro:IPR000210	InterPro:IPR027356	UniProt:M0SUV0
InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370
PANTHER:PTHR32370:SF4	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI0002966A6C	SEG:seg	:

Description

BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G01710_001]

Coordinates

chr5:-:1007699..1010846

Molecular Weight (calculated)

63493.3 Da

IEP (calculated)

6.273

GRAVY (calculated)

-0.089

Length

581 amino acids

Sequence
(BLAST)

001: MKYMKLGSKP DAFQSDGNNI RFVATELATD IVVNVGDVKF HLHKFPLLSK SPRLQKLVVA TGEEEDEEID IPDIPGGPAA FEICAKFCYG MIVTLNAYNA
101: VAARCAAEYL EMHEAVEKGN LIYKIEVFLS SSILRAWKDS IIVLHTTRSL LPWAEDLKLV VRCTDSIASK ASSVPKDWWV EDLCDLEMDS YKRVLIAIRT
201: KGKIADDVVG EALKAYAYRR LPGFAKGSVT CGSDPMRSRT ILETIVWLLP TEPGSVSCSF LLKLLRSASA LECGETCKKE LIRRAGRQLQ EAAASDLLLP
301: SATGETVYDV DLVASVVEEF VTQDGGTART SPEASEEVVE VRSPVFVSPS SKAAVANLVY EYLAEVAKDP DLPLPKFVEL AEMVSAASTP VHDGLYRAID
401: VYLKEHPGLS KSEKRRICSM MDCRKLSTDA CVHAVQNERL PLRVVVQILF FVQMRAAAAP AAGGVSQLPG NVKALLRENG GSYGSSRSAV TTNTEDDWDG
501: GNGKVKGILL PKRILSKLWS GKGQGGENSS SDMSESPGSV AQEEAKSTHS RNTRHSEKSM IIREFVLFQL SQKATFVLFQ V

Best Arabidopsis Sequence Match ( AT2G14820.1 )
(BLAST)

001: MKFMKIGSKL DSFKTDGNNV RYVENELASD ISVDVEGSRF CLHKFPLLSK CACLQKLLSS TDKNNIDDID ISGIPGGPTA FETCAKFCYG MTVTLSAYNV
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS

Arabidopsis Description

NPY2BTB/POZ domain-containing protein NPY2 [Source:UniProtKB/Swiss-Prot;Acc:O80970]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.