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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra032187.1-P Field mustard cytosol 98.95 98.33
CDX89539 Canola cytosol 95.8 95.2
AT2G23050.1 Thale cress cytosol 82.98 82.12
CDY22422 Canola cytosol 67.86 56.17
CDY44035 Canola cytosol 67.86 56.17
CDX72639 Canola cytosol 67.65 55.71
CDY29566 Canola cytosol 67.23 55.36
CDX81314 Canola cytosol 54.83 49.62
CDY18660 Canola cytosol 53.99 48.67
KRH04439 Soybean cytosol 63.45 48.01
KRH58085 Soybean cytosol 62.6 47.76
GSMUA_Achr4P10900_001 Banana cytosol 55.46 47.4
VIT_07s0129g00250.t01 Wine grape cytosol 62.4 47.22
CDY69095 Canola cytosol 55.25 46.88
KRH04442 Soybean cytosol 61.76 46.67
KRH58082 Soybean cytosol 61.55 46.66
Solyc02g092480.2.1 Tomato cytosol 61.13 46.34
CDY12846 Canola cytosol 54.83 46.19
PGSC0003DMT400064174 Potato cytosol 60.71 46.02
Solyc03g044090.2.1 Tomato cytosol 58.61 44.29
CDX81462 Canola cytosol 56.09 44.28
OQU93039 Sorghum cytosol 56.51 44.17
PGSC0003DMT400038537 Potato cytosol 57.98 44.02
Os03t0205700-01 Rice cytosol 55.88 43.97
CDY37223 Canola cytosol 55.67 43.95
GSMUA_Achr10P... Banana cytosol 52.52 43.94
GSMUA_Achr5P01710_001 Banana cytosol 53.57 43.89
TraesCS4B01G256600.1 Wheat cytosol 55.04 43.31
TraesCS4A01G048200.1 Wheat cytosol 55.04 43.23
TraesCS4D01G256700.1 Wheat cytosol 55.04 43.23
EER91236 Sorghum cytosol 57.14 42.97
HORVU4Hr1G069760.10 Barley cytosol 55.04 42.81
TraesCS5A01G070700.1 Wheat cytosol 55.88 42.77
Os12t0583500-01 Rice cytosol, plasma membrane 57.14 42.63
Zm00001d048138_P007 Maize cytosol 55.88 42.63
TraesCS5D01G082800.1 Wheat cytosol 55.67 42.6
TraesCS5B01G076500.1 Wheat cytosol 55.46 42.51
TraesCS4A01G236100.1 Wheat cytosol 56.51 42.43
TraesCS4D01G077700.3 Wheat cytosol 56.3 42.27
Zm00001d033344_P001 Maize cytosol 56.3 42.2
TraesCS4B01G078900.3 Wheat cytosol 56.09 42.11
CDY50369 Canola cytosol 44.96 41.72
Zm00001d013741_P001 Maize cytosol 56.09 41.52
GSMUA_Achr7P26250_001 Banana cytosol 54.41 41.51
HORVU5Hr1G018480.1 Barley cytosol 54.83 41.43
Os03t0609800-02 Rice cytosol 55.04 41.32
Zm00001d030864_P001 Maize cytosol 54.41 40.41
CDY72257 Canola cytosol 42.86 40.32
CDY72267 Canola cytosol 42.86 40.32
OQU79444 Sorghum cytosol 53.99 39.91
GSMUA_Achr2P13430_001 Banana cytosol 55.88 39.64
CDX68790 Canola cytosol 44.96 37.41
CDX75198 Canola cytosol 45.17 37.26
Zm00001d028075_P010 Maize endoplasmic reticulum 56.3 33.21
CDY68489 Canola cytosol, plastid 31.09 32.96
CDX83620 Canola cytosol 37.18 32.36
CDX77798 Canola cytosol 38.03 32.26
CDY17704 Canola cytosol 38.03 32.26
CDY13635 Canola cytosol 37.82 31.36
CDY10395 Canola cytosol 35.71 31.31
CDX70320 Canola cytosol 36.34 30.24
CDX85639 Canola cytosol 36.13 30.07
CDX80858 Canola cytosol 36.97 29.93
CDY11245 Canola cytosol 36.97 29.43
CDX90249 Canola cytosol, mitochondrion, nucleus 38.03 28.68
CDY09812 Canola cytosol 36.34 28.45
CDX69627 Canola cytosol 35.92 28.17
CDY27653 Canola cytosol 36.13 27.83
CDY57436 Canola cytosol 34.87 27.53
CDY02293 Canola cytosol, mitochondrion, nucleus 38.03 27.47
CDY09586 Canola cytosol 37.82 27.44
CDY12841 Canola cytosol 34.66 27.36
CDY37857 Canola cytosol 34.45 27.33
CDX85365 Canola cytosol 34.45 26.45
CDX86278 Canola cytosol 34.45 26.45
CDX84827 Canola cytosol 31.3 26.37
CDX99692 Canola cytosol, mitochondrion, nucleus 35.71 26.36
CDX84515 Canola cytosol 40.13 26.31
CDX81221 Canola cytosol 39.92 26.03
CDY18715 Canola cytosol 39.5 25.97
CDY02075 Canola cytosol 31.3 25.69
CDY23992 Canola cytosol 30.46 25.66
CDY30615 Canola cytosol 26.89 25.65
CDX77951 Canola cytosol 29.41 25.55
CDY10743 Canola cytosol 31.09 25.47
CDY57361 Canola cytosol 26.68 25.45
CDX73781 Canola cytosol 28.78 25.14
CDY37449 Canola cytosol 25.63 25.1
CDY45241 Canola cytosol 31.3 24.92
CDY09561 Canola cytosol 31.09 24.5
CDX89922 Canola cytosol 32.35 24.44
CDY18140 Canola cytosol 32.14 24.29
CDY02305 Canola cytosol 30.88 24.22
CDY32492 Canola cytosol 32.35 24.14
CDY30765 Canola cytosol 32.14 24.13
CDY52208 Canola plastid 32.14 23.68
CDX73937 Canola plastid 28.99 23.63
CDY00659 Canola plastid 28.78 23.42
CDX96986 Canola cytosol 30.46 23.16
CDX69851 Canola cytosol 30.25 22.86
CDX83030 Canola plastid 23.95 21.31
CDY72506 Canola cytosol 5.67 21.26
CDY29723 Canola cytosol 30.46 20.8
CDY20341 Canola cytosol 30.46 20.42
CDY12056 Canola plasma membrane 37.6 11.09
Protein Annotations
Gene3D:3.30.710.10MapMan:35.1UniProt:A0A078HQ77InterPro:BTB/POZ_domEnsemblPlants:CDY38923ProteinID:CDY38923
ProteinID:CDY38923.1GO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00066960001InterPro:IPR000210
InterPro:IPR027356InterPro:NPH3_domPFAM:PF00651PFAM:PF03000PFscan:PS50097PFscan:PS51649
PANTHER:PTHR32370PANTHER:PTHR32370:SF26InterPro:SKP1/BTB/POZ_sfSUPFAM:SSF54695UniPathway:UPA00143UniParc:UPI0004EEB911
SEG:seg:::::
Description
BnaA04g13440DBnaA04g13440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQ77]
Coordinates
chrLK032435:+:25858..27738
Molecular Weight (calculated)
54268.0 Da
IEP (calculated)
6.341
GRAVY (calculated)
-0.305
Length
476 amino acids
Sequence
(BLAST)
001: MKFMKLGSKP DTVQSKGDNV RYVATELETE LIVTIGNIKF YLHKFPLLSK SGYLQKLIAT SRNEEKKNQV DEVDISEIPG GSVAFEVCVK FCYGITVTLN
101: AYNVFAARCA AEFLEMNETF EKSNLAYKID VFLNSTIFRS WKDSIIVFST TRDLSPNYTN EFTLKRCLDS IAYTASIDTS KVEWSYTYNR KKKLDEKAVP
201: RDWWVEDLCE LHIDLYKQAI EAIETRGKVP VEVIGEALHA YARRRIGGFS KGSVRVIDKS LTESIIELLP EKKGSVSSSF LSKLLRASVF LGCEETVKER
301: LKKRISEQLE ETAVSDILMF DIDMVQSLVK EFMDRDPKSH PKASVAKLVD GYLAEKSRDP NLLLQNFLSL VETVSSFPRQ SHDGLYRAID MFLKEHPGID
401: KSEKKRVCGL MDCRKLSAEA CEHAVQNERL PMRVIVQVLF FEQIRVNGSS TGYSTPELTT TTLNTEDDEW DHVKEY
Best Arabidopsis Sequence Match ( AT2G23050.1 )
(BLAST)
001: MKFMKLGTKP DSFLSKGDNV RYVTNELETE IIIIIGNVKF YLHKFPLLSK SGFLQKHIAT SKNEEEKKNQ IDEIDISEIP GGSVAFEICV KFCYGITVTL
101: NAYNVVAVRC AAEFLEMNET FEKSNLVYKI DVFLNSTIFR SWKDSIIVLQ TTKDLLSDDS EELVKRCLGS IASTASIDTS KVKWSYTYNR KKKLEKVRKP
201: EDGVPKDWWV EDLCELHIDL YKQAIKAIKN RGKVPSNVIG EALHAYAIRR IAGFSKESMQ LIDRSLINTI IELLPDEKGN ISSSFLTKLH RASIFLGCEE
301: TVKEKLKKRV SEQLEETTVN DILMYDLDMV QSLVKEFMNR DPKTHSKVSV AKLIDGYLAE KSRDPNLPLQ NFLSLAETLS SFPRHSHDVL YRAIDMFLKE
401: HSGISKSEKK RVCGLMDCRK LSAEACEHAV QNERLPMRVI VQVLFFEQIR ANGSSTGYST PELTTTTLNT EDDEWDHEKE F
Arabidopsis Description
NPY4BTB/POZ domain-containing protein NPY4 [Source:UniProtKB/Swiss-Prot;Acc:O64814]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.