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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY02293 Canola cytosol, mitochondrion, nucleus 99.24 98.79
Bra032391.1-P Field mustard cytosol, mitochondrion, nucleus 99.09 98.34
AT1G30440.1 Thale cress cytosol, mitochondrion, nucleus 93.9 92.63
CDX90249 Canola cytosol, mitochondrion, nucleus 85.98 89.38
CDY27653 Canola cytosol 77.13 81.88
CDX99692 Canola cytosol, mitochondrion, nucleus 78.2 79.53
VIT_10s0003g04490.t01 Wine grape cytosol 72.26 75.0
Solyc02g021640.2.1 Tomato nucleus 71.8 74.88
PGSC0003DMT400008211 Potato cytosol, mitochondrion 71.65 74.72
KRH37734 Soybean cytosol 72.71 74.18
KRH12771 Soybean cytosol 72.41 73.87
EER91175 Sorghum cytosol 64.18 66.72
Zm00001d033240_P002 Maize cytosol, mitochondrion, nucleus 63.87 66.61
GSMUA_Achr5P02440_001 Banana cytosol 57.47 65.79
GSMUA_Achr5P00550_001 Banana cytosol 62.5 65.18
HORVU5Hr1G093120.2 Barley cytosol 62.2 64.35
TraesCS5D01G385100.1 Wheat plastid 62.2 64.15
GSMUA_Achr4P31620_001 Banana cytosol 58.23 63.99
GSMUA_Achr6P30010_001 Banana cytosol 53.2 63.69
GSMUA_Achr9P26110_001 Banana cytosol 57.47 62.21
Os12t0613250-00 Rice plasma membrane 61.28 61.85
TraesCS5A01G042600.1 Wheat cytosol 59.45 61.61
TraesCS5D01G051100.1 Wheat cytosol 59.15 61.39
TraesCS5A01G375500.3 Wheat peroxisome 60.06 61.18
Os08t0130600-01 Rice plasma membrane 59.6 61.0
TraesCS5B01G377600.1 Wheat cytosol 62.5 60.47
EES14497 Sorghum cytosol 58.99 58.81
HORVU7Hr1G073650.1 Barley cytosol 57.47 58.81
TraesCS7D01G306400.1 Wheat cytosol 57.62 58.79
TraesCS5B01G046200.2 Wheat mitochondrion 57.47 58.72
TraesCS7A01G309700.1 Wheat cytosol 57.32 58.48
TraesCS7B01G209700.1 Wheat cytosol 57.16 58.32
Zm00001d035208_P002 Maize cytosol 58.69 58.07
CDY10395 Canola cytosol 44.82 54.14
CDX70320 Canola cytosol 46.34 53.15
CDX80858 Canola cytosol 45.58 50.85
CDY11245 Canola cytosol 45.58 50.0
CDX85639 Canola cytosol 43.14 49.48
HORVU5Hr1G010370.2 Barley plastid 59.3 49.3
CDY72506 Canola cytosol 9.3 48.03
CDX69627 Canola cytosol 44.05 47.61
CDY09812 Canola cytosol 43.9 47.37
CDY30765 Canola cytosol 43.29 44.8
CDY45241 Canola cytosol 40.7 44.65
CDX77951 Canola cytosol 36.43 43.61
CDX73781 Canola cytosol 35.82 43.12
CDY29723 Canola cytosol 42.23 39.74
CDY20341 Canola cytosol 42.53 39.3
CDY72267 Canola cytosol 29.27 37.94
CDY38923 Canola cytosol 27.44 37.82
CDX89539 Canola cytosol 27.59 37.79
CDY72257 Canola cytosol 29.12 37.75
CDY68489 Canola cytosol, plastid 25.61 37.42
CDX85365 Canola cytosol 35.06 37.1
CDX86278 Canola cytosol 34.91 36.94
CDX81314 Canola cytosol 28.81 35.93
CDY44035 Canola cytosol 31.4 35.83
CDY22422 Canola cytosol 31.25 35.65
CDY18660 Canola cytosol 28.35 35.23
CDY29566 Canola cytosol 30.95 35.12
CDX72639 Canola cytosol 30.95 35.12
CDX84515 Canola cytosol 38.72 34.99
CDY18715 Canola cytosol 38.57 34.94
CDY00659 Canola plastid 31.1 34.87
CDY12056 Canola plasma membrane 85.67 34.82
CDX73937 Canola plastid 30.95 34.76
CDY37857 Canola cytosol 31.71 34.67
CDY69095 Canola cytosol 29.57 34.58
CDX81221 Canola cytosol 37.96 34.11
CDY12846 Canola cytosol 29.27 33.98
CDY57436 Canola cytosol 30.95 33.66
CDY12841 Canola cytosol 30.95 33.66
CDY30615 Canola cytosol 25.3 33.27
CDY18140 Canola cytosol 31.86 33.17
CDY57361 Canola cytosol 25.15 33.07
CDX89922 Canola cytosol 31.71 33.02
CDX81462 Canola cytosol 30.34 33.0
CDY09561 Canola cytosol 30.34 32.95
CDX83620 Canola cytosol 27.44 32.91
CDY10743 Canola cytosol 28.96 32.7
CDY37223 Canola cytosol 30.03 32.67
CDY02305 Canola cytosol 30.18 32.62
CDY02075 Canola cytosol 28.81 32.59
CDY32492 Canola cytosol 31.4 32.29
CDX84827 Canola cytosol 27.74 32.21
CDX68790 Canola cytosol 28.05 32.17
CDY13635 Canola cytosol 28.05 32.06
CDY23992 Canola cytosol 27.59 32.04
CDY50369 Canola cytosol 25.0 31.97
CDY52208 Canola plastid 30.95 31.42
CDX77798 Canola cytosol 26.83 31.37
CDY17704 Canola cytosol 26.83 31.37
CDX75198 Canola cytosol 27.59 31.37
CDY37449 Canola cytosol 22.87 30.86
CDX69851 Canola cytosol 28.35 29.52
CDX96986 Canola cytosol 27.59 28.91
CDX83030 Canola plastid 23.48 28.79
Os12t0613300-02 Rice nucleus 1.22 2.69
Protein Annotations
Gene3D:3.30.710.10MapMan:35.1UniProt:A0A078F8D3InterPro:BTB/POZ_domEnsemblPlants:CDY09586ProteinID:CDY09586
ProteinID:CDY09586.1GO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00031200001InterPro:IPR000210
InterPro:IPR027356InterPro:NPH3_domPFAM:PF00651PFAM:PF03000PFscan:PS50097PFscan:PS51649
PANTHER:PTHR32370PANTHER:PTHR32370:SF12InterPro:SKP1/BTB/POZ_sfSUPFAM:SSF54695UniPathway:UPA00143UniParc:UPI0004EE5EC5
SEG:seg:::::
Description
BnaC05g23330DBnaC05g23330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8D3]
Coordinates
chrLK031997:-:632864..636194
Molecular Weight (calculated)
72332.9 Da
IEP (calculated)
7.070
GRAVY (calculated)
-0.300
Length
656 amino acids
Sequence
(BLAST)
001: MACMKLGSKS DAFQRQGQAW FCTSGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAKA SKEGDDNCLI KISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEL LEMTEEYGEG NLISQTETFF NQVVLKSWKD SVKALQSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGGP MQSPGGSVLW
201: NGISTGARPR QTSSDWWYED ASMLSFPLFK RLITVMDSRG IREDIIAGSL THYTRKHLPG LKRRRGGPPE SSGRFSTPLS SGSVLSEEEQ KRLLEETEEL
301: LRMQKGLVPT KFFADMLRIA KILKASPSCV ANLEKRIGMQ LDQAALEDLV MPSFSHTMET LYDVDSVQRI LDHFLSTDQI MPADVGSPCS SVDDGNVIGS
401: PRLITPMTAV AKLIDGYLAE VAPDVNLKLP KFQALAASVP EYARLLDDGL YRAIDIYLKH HPWLAETERE NLCRLLDCQK LSLEACTHAA QNERLPLRVI
501: VQVLFFEQLQ LRTSVAGCFL VSDNLDGGSR QLRSGGFAGG STEGGGGWAT AVRENQVLKV GMDSMRMRVC ELEKECSNMR QEIEKLGKTT KGGGGGGSGS
601: GSKTWFGIKL KSHQMCSAQE GSVSKSNNEN VKIEKLKDVK ERRGKHKKAS SISSER
Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)
001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER
Arabidopsis Description
BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.