CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57436	Canola	cytosol	95.85	95.85
CDY68489	Canola	cytosol, plastid	69.49	93.32
CDY37857	Canola	cytosol	91.71	92.17
AT5G67385.1	Thale cress	cytosol	90.71	90.56
CDY30615	Canola	cytosol	60.2	72.75
CDY57361	Canola	cytosol	59.87	72.34
VIT_07s0129g00380.t01	Wine grape	cytosol	72.31	68.55
Solyc02g092560.2.1	Tomato	cytosol, nucleus	67.5	68.29
KRH77099	Soybean	cytosol	69.65	67.96
KRH04469	Soybean	cytosol	65.67	67.92
KRH58066	Soybean	cytosol	66.0	67.46
KRH28386	Soybean	cytosol	69.98	66.98
GSMUA_Achr7P26300_001	Banana	cytosol	64.18	65.37
PGSC0003DMT400033866	Potato	cytosol	61.53	61.73
Solyc02g064720.2.1	Tomato	cytosol	61.69	61.49
TraesCS4B01G255500.1	Wheat	cytosol	55.89	55.7
TraesCS4A01G049300.1	Wheat	cytosol	55.89	55.43
TraesCS4D01G255500.1	Wheat	cytosol	56.05	55.23
Zm00001d028056_P001	Maize	cytosol	54.23	54.77
HORVU4Hr1G069480.3	Barley	cytosol	55.56	54.65
KXG39906	Sorghum	cytosol	54.39	53.33
Os03t0206700-00	Rice	plasma membrane	54.39	52.4
CDX86278	Canola	cytosol	42.45	41.29
CDX85365	Canola	cytosol	42.29	41.13
CDX84827	Canola	cytosol	37.65	40.18
CDX89922	Canola	cytosol	41.13	39.37
CDY23992	Canola	cytosol	36.82	39.29
CDY10743	Canola	cytosol	37.81	39.24
CDY18140	Canola	cytosol	40.8	39.05
CDY02075	Canola	cytosol	37.48	38.97
CDY32492	Canola	cytosol	40.8	38.56
CDY52208	Canola	plastid	41.29	38.54
CDY09561	Canola	cytosol	38.14	38.08
CDY37449	Canola	cytosol	30.51	37.86
CDY02305	Canola	cytosol	37.65	37.4
CDY72257	Canola	cytosol	30.85	36.76
CDY72267	Canola	cytosol	30.85	36.76
CDX73937	Canola	plastid	35.49	36.64
CDY00659	Canola	plastid	35.49	36.58
CDX83030	Canola	plastid	32.34	36.45
CDY72506	Canola	cytosol	7.63	36.22
CDX89539	Canola	cytosol	28.03	35.28
CDY38923	Canola	cytosol	27.36	34.66
CDY10395	Canola	cytosol	31.18	34.62
CDX70320	Canola	cytosol	32.01	33.74
CDY45241	Canola	cytosol	33.17	33.44
CDX85639	Canola	cytosol	31.51	33.22
CDY12846	Canola	cytosol	30.85	32.92
CDX73781	Canola	cytosol	29.68	32.84
CDX80858	Canola	cytosol	31.84	32.65
CDY69095	Canola	cytosol	30.02	32.26
CDY37223	Canola	cytosol	32.17	32.17
CDX81462	Canola	cytosol	32.17	32.17
CDY30765	Canola	cytosol	33.66	32.02
CDX90249	Canola	cytosol, mitochondrion, nucleus	33.5	32.01
CDY11245	Canola	cytosol	31.68	31.94
CDX77951	Canola	cytosol	29.02	31.93
CDX69627	Canola	cytosol	31.84	31.63
CDX81314	Canola	cytosol	27.53	31.56
CDY27653	Canola	cytosol	32.17	31.39
CDY09812	Canola	cytosol	31.51	31.25
CDY44035	Canola	cytosol	29.68	31.13
CDX72639	Canola	cytosol	29.68	30.97
CDY09586	Canola	cytosol	33.66	30.95
CDX68790	Canola	cytosol	29.35	30.94
CDY18660	Canola	cytosol	27.03	30.87
CDY50369	Canola	cytosol	26.2	30.8
CDY29566	Canola	cytosol	29.52	30.8
CDY02293	Canola	cytosol, mitochondrion, nucleus	33.5	30.65
CDY22422	Canola	cytosol	29.02	30.43
CDX99692	Canola	cytosol, mitochondrion, nucleus	32.34	30.23
CDX75198	Canola	cytosol	28.69	29.98
CDX83620	Canola	cytosol	26.7	29.43
CDY18715	Canola	cytosol	35.16	29.28
CDX84515	Canola	cytosol	35.16	29.2
CDX81221	Canola	cytosol	35.32	29.18
CDX69851	Canola	cytosol	30.02	28.73
CDX96986	Canola	cytosol	29.52	28.43
CDY13635	Canola	cytosol	26.7	28.05
CDY29723	Canola	cytosol	29.35	25.39
CDX77798	Canola	cytosol	23.55	25.31
CDY17704	Canola	cytosol	23.55	25.31
CDY20341	Canola	cytosol	29.19	24.79
CDY12056	Canola	plasma membrane	34.0	12.7

Protein Annotations

EnsemblPlants:CDY12841	EnsemblPlantsGene:GSBRNA2T00070483001	Gene3D:3.30.710.10	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf
ncoils:Coil	PANTHER:PTHR32370	PANTHER:PTHR32370:SF14	PFAM:PF03000	PFscan:PS51649	ProteinID:CDY12841
ProteinID:CDY12841.1	SEG:seg	SUPFAM:SSF54695	UniParc:UPI0004EAB976	UniPathway:UPA00143	UniProt:A0A078FHZ7
MapMan:35.1	:	:	:	:	:

Description

BnaC07g15920DBnaC07g15920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHZ7]

Coordinates

chrLK032027:+:595414..597769

Molecular Weight (calculated)

67813.1 Da

IEP (calculated)

7.496

GRAVY (calculated)

-0.297

Length

603 amino acids

Sequence
(BLAST)

001: MSAKKKDLLS SAMKRTSEWI SSQEVCSDVT VHVGEASFLL HKFPLLSKCG LIKKLVSETK NDSDASLIKI PYIPGGSEAF ELTAKFCYGI NFDMSTENIA
101: MLRCAAEYLE MTEEHSVENL VVRAEAYLNE VALKSLSSAI TVLHKSEELL PIAERVKLVS RCIDAIAYMT CQESQFCSPS SSNNSNNEVV VQHQSKQPVV
201: DWWAEDLTVL RIDSFQRVLI AMMARGFKQY GLGPVLMLYA QKSLRGLEIF GKGTKKIDPK QEHEKRVILE TIVSLLPREK NAMSVSFLSM LLRAAIYLET
301: TVACRLDLEK RMGLQLPQAV LDDLLIPSYS FTGEHSLFDT DTVQRILMNY LEFELEGVRL SNNGVDHGSD MERVGKLMEN YLAEIASDRN VSLQKFISLA
401: ELIPEQSWVT EDGMYRAVDI YLKAHPNMSD VEKKKVCSLM DCQKLSREAC AHAAQNDRLP VQTIVQVLYY EQQRLRGEVT NDSEALPPQP PPPAAAATVL
501: PPKLSSYNDE LSKLKRENQD LKLEILKMKM KLKEFEKENE KKSLSTTMSS NHSSPISTAS MDKPPLPRKS FMNSVSRKLG KLNPFGITPG RTKPPKDRRH
601: SIS

Best Arabidopsis Sequence Match ( AT5G67385.1 )
(BLAST)

001: MSAKKKDLLS SAMKRTSEWI SSQEVSSDVT VHVGEASFSL HKFPLMSKCG FIKKLVSESS KDSDSTVIKI PDIPGGSEAF ELAAKFCYGI NFDMSTENIA
101: MLRCAAEYLE MTEEHSVENL VVRAEAYLNE VALKSLSSSI TVLHKSEKLL PIAERVKLVS RCIDAIAYMT CQESHFCSPS SSNSGNNEVV VQQQSKQPVV
201: DWWAEDLTVL RIDSFQRVLI AMMARGFKQY GLGPVLMLYA QKSLRGLEIF GKGMKKIEPK QEHEKRVILE TIVSLLPREK NAMSVSFLSM LLRAAIFLET
301: TVACRLDLEN RMGLQLGQAV LDDLLIPSYS FTGDHSMFDT DTVQRILMNY LEFEVEGVRL SNNGVDLAGD MERVGKLLEN YMAEIASDRN VSLQKFIGLA
401: ELIPEQSRVT EDGMYRAVDI YLKAHPNMSD VERKKVCSLM DCQKLSREAC AHAAQNDRLP VQTIVQVLYY EQQRLRGEVT NDSDSPAPPP PQPAAVLPPK
501: LSSYTDELSK LKRENQDLKL ELLKMKMKLK EFEKESEKKT SSSTISTNPS SPISTASTGK PPLPRKSFIN SVSKKLGKLN PFSITPYNGR GRTKPPKDRR
601: HSIS

Arabidopsis Description

SR1IP1BTB/POZ domain-containing protein At5g67385 [Source:UniProtKB/Swiss-Prot;Acc:Q66GP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.