CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18660	Canola	cytosol	93.92	93.56
CDY69095	Canola	cytosol	86.5	81.11
CDY12846	Canola	cytosol	85.55	79.65
AT5G67440.1	Thale cress	cytosol	86.31	78.41
CDX89539	Canola	cytosol	50.19	55.11
CDY38923	Canola	cytosol	49.62	54.83
PGSC0003DMT400064174	Potato	cytosol	64.64	54.14
CDX72639	Canola	cytosol	59.32	53.98
CDY29566	Canola	cytosol	59.32	53.98
Solyc02g092480.2.1	Tomato	cytosol	64.26	53.82
VIT_07s0129g00250.t01	Wine grape	cytosol	64.26	53.74
KRH04439	Soybean	cytosol	63.31	52.94
CDY44035	Canola	cytosol	57.6	52.7
CDY22422	Canola	cytosol	57.41	52.52
KRH58085	Soybean	cytosol	62.17	52.4
KRH58082	Soybean	cytosol	62.17	52.07
GSMUA_Achr5P01710_001	Banana	cytosol	57.41	51.98
PGSC0003DMT400038537	Potato	cytosol	61.6	51.67
Solyc03g044090.2.1	Tomato	cytosol	61.22	51.11
KRH04442	Soybean	cytosol	61.03	50.95
GSMUA_Achr4P10900_001	Banana	cytosol	52.28	49.37
TraesCS4B01G078900.3	Wheat	cytosol	58.37	48.42
TraesCS4A01G236100.1	Wheat	cytosol	58.17	48.27
EER91236	Sorghum	cytosol	57.98	48.18
Os12t0583500-01	Rice	cytosol, plasma membrane	57.98	47.81
TraesCS4D01G077700.3	Wheat	cytosol	57.6	47.79
Zm00001d033344_P001	Maize	cytosol	57.41	47.56
CDX81462	Canola	cytosol	54.37	47.43
Os03t0609800-02	Rice	cytosol	57.03	47.32
CDY37223	Canola	cytosol	54.18	47.26
GSMUA_Achr10P...	Banana	cytosol	50.38	46.57
TraesCS5A01G070700.1	Wheat	cytosol	54.94	46.46
TraesCS5B01G076500.1	Wheat	cytosol	54.75	46.38
GSMUA_Achr7P26250_001	Banana	cytosol	54.94	46.31
TraesCS4D01G256700.1	Wheat	cytosol	53.23	46.2
Zm00001d013741_P001	Maize	cytosol	56.46	46.19
TraesCS5D01G082800.1	Wheat	cytosol	54.56	46.14
Os03t0205700-01	Rice	cytosol	53.04	46.12
TraesCS4B01G256600.1	Wheat	cytosol	53.04	46.12
TraesCS4A01G048200.1	Wheat	cytosol	53.04	46.04
HORVU4Hr1G069760.10	Barley	cytosol	53.42	45.91
HORVU5Hr1G018480.1	Barley	cytosol	54.75	45.71
OQU79444	Sorghum	cytosol	55.89	45.65
OQU93039	Sorghum	cytosol	52.85	45.65
CDY50369	Canola	cytosol	44.11	45.22
Zm00001d048138_P007	Maize	cytosol	52.66	44.39
Zm00001d030864_P001	Maize	cytosol	53.99	44.31
GSMUA_Achr2P13430_001	Banana	cytosol	56.27	44.11
CDX75198	Canola	cytosol	47.15	42.98
CDX68790	Canola	cytosol	46.39	42.66
CDY72257	Canola	cytosol	39.92	41.5
CDY72267	Canola	cytosol	39.92	41.5
CDX83620	Canola	cytosol	36.12	34.73
Zm00001d028075_P010	Maize	endoplasmic reticulum	52.28	34.08
CDY13635	Canola	cytosol	36.69	33.62
CDY10395	Canola	cytosol	33.65	32.6
CDX70320	Canola	cytosol	34.98	32.17
CDX80858	Canola	cytosol	35.74	31.97
CDX77798	Canola	cytosol	33.84	31.73
CDY17704	Canola	cytosol	33.84	31.73
CDY68489	Canola	cytosol, plastid	27.0	31.63
CDY11245	Canola	cytosol	35.74	31.44
CDX85639	Canola	cytosol	32.89	30.24
CDX90249	Canola	cytosol, mitochondrion, nucleus	35.74	29.79
CDX73781	Canola	cytosol	30.8	29.72
CDX77951	Canola	cytosol	30.61	29.38
CDY09586	Canola	cytosol	35.93	28.81
CDY02293	Canola	cytosol, mitochondrion, nucleus	35.74	28.53
CDY45241	Canola	cytosol	32.32	28.43
CDX69627	Canola	cytosol	32.7	28.34
CDY27653	Canola	cytosol	33.27	28.32
CDY09812	Canola	cytosol	32.7	28.29
CDY18715	Canola	cytosol	38.4	27.9
CDX84515	Canola	cytosol	38.4	27.82
CDX84827	Canola	cytosol	29.66	27.61
CDY30765	Canola	cytosol	33.27	27.6
CDY12841	Canola	cytosol	31.56	27.53
CDY57436	Canola	cytosol	31.56	27.53
CDX99692	Canola	cytosol, mitochondrion, nucleus	33.65	27.44
CDY02075	Canola	cytosol	30.23	27.41
CDX81221	Canola	cytosol	37.83	27.26
CDY23992	Canola	cytosol	29.28	27.26
CDY10743	Canola	cytosol	30.04	27.19
CDY37857	Canola	cytosol	30.8	27.0
CDY09561	Canola	cytosol	30.99	26.99
CDX85365	Canola	cytosol	31.56	26.77
CDX86278	Canola	cytosol	31.56	26.77
CDY37449	Canola	cytosol	24.71	26.75
CDX89922	Canola	cytosol	31.75	26.51
CDX73937	Canola	plastid	29.09	26.2
CDY02305	Canola	cytosol	30.23	26.19
CDY18140	Canola	cytosol	31.37	26.19
CDY00659	Canola	plastid	29.09	26.15
CDY30615	Canola	cytosol	24.52	25.85
CDY57361	Canola	cytosol	24.33	25.65
CDY32492	Canola	cytosol	30.61	25.24
CDX96986	Canola	cytosol	29.66	24.92
CDX69851	Canola	cytosol	29.66	24.76
CDY52208	Canola	plastid	30.23	24.61
CDY72506	Canola	cytosol	5.89	24.41
CDX83030	Canola	plastid	24.52	24.11
CDY29723	Canola	cytosol	29.47	22.24
CDY20341	Canola	cytosol	29.47	21.83
CDY12056	Canola	plasma membrane	35.74	11.65

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlants:CDX81314	ProteinID:CDX81314	ProteinID:CDX81314.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00134841001	InterPro:IPR000210	InterPro:IPR027356
InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370
PANTHER:PTHR32370:SF26	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniPathway:UPA00143	UniParc:UPI0004EEC174	SEG:seg

Description

BnaC09g07250D

Coordinates

chrLK031824:+:878878..882164

Molecular Weight (calculated)

58168.0 Da

IEP (calculated)

5.651

GRAVY (calculated)

-0.327

Length

526 amino acids

Sequence
(BLAST)

001: MKFMKLGSKP DSFQSEEDCI RYVASDLATD VVVNVGDVKF YLHKFPLLSK SARLQKLIAA TINEQQQPDD EISIPDIPGG PQAFEICAKF CYGMTVTLNA
101: YNVVAARCAA EYLEMYESVE TGNLVYKIEV FLNSSVLRSW KDSIIVLQTT RSFHPWSGDA KIDARCLESI ASKAAVDPAR VDWSYTYNRR KLNNGVPIDW
201: WVDDLTELSI DLYKRVVSSI RRKGGVSPEV IGEALESVSC GILIKLLKSS VSLECGEDVR KELSKRIGEK LGEANVDDLL IRASDGCETV YDVDIVETLI
301: DEFITQSEKR DEVGCSDSSK AVVAKLIDGY LAEIARIEPN LSPLKFIATA EKVSSFPRSS HDGVYRAIDM FLKEHPGVTK SEKKSICRLM DCRKLSPEAC
401: AHAVQNERLP LRVVVQILFF EQVRATAKPS LPPSGSHGSS RTTTEEECDS VTATEETRTT RDKTNGSEKT KAKGVVMSRI FSKLWTGKDR DGVGDVSSSD
501: TSESPGSATT IDDKSTPSTR RRRSSS

Best Arabidopsis Sequence Match ( AT5G67440.3 )
(BLAST)

001: MKFMKLGSKP DSFQSDEDCV RYVATELATD VVVIVGDVKF HLHKFPLLSK SARLQKLIAT TTTDEQSDDD EIRIPDIPGG PPAFEICAKF CYGMAVTLNA
101: YNVVAVRCAA EYLEMYESIE NGNLVYKMEV FLNSSVLRSW KDSIIVLQTT RSFYPWSEDV KLDVRCLESI ALKAAMDPAR VDWSYTYNRR KLLPPEMNNN
201: SVPRDWWVED LAELSIDLFK RVVSTIRRKG GVLPEVIGEA LEVYAAKRIP GFMIQNDDND DEEDVMEQRS LLETLVSMLP SEKQSVSCGF LIKLLKSSVS
301: FECGEEERKE LSRRIGEKLE EANVGDLLIR APEGGETVYD IDIVETLIDE FVTQTEKRDE LDCSDDINDS SKANVAKLID GYLAEISRIE TNLSTTKFIT
401: IAEKVSTFPR QSHDGVYRAI DMFLKQHPGI TKSEKKSSSK LMDCRKLSPE ACAHAVQNER LPLRVVVQIL FFEQVRATTK PSLPPSGSHG SSRTTTEEEC
501: ESVTATEETT TTTRDKTSSS EKTKAKGVVM SRIFSKLWTG KDKDGVGDVS SSDTSESPGS VTTVGDKSTP STRRRRSSS

Arabidopsis Description

NPY3BTB/POZ domain-containing protein NPY3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN09]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.