Factsheet for TraesCS4B01G256600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G048200.1	Wheat	cytosol	99.01	98.84
TraesCS4D01G256700.1	Wheat	cytosol	98.51	98.35
HORVU4Hr1G069760.10	Barley	cytosol	97.36	96.24
Os03t0205700-01	Rice	cytosol	84.96	84.96
OQU93039	Sorghum	cytosol	85.45	84.89
Zm00001d048138_P007	Maize	cytosol	83.47	80.93
Zm00001d028075_P010	Maize	endoplasmic reticulum	83.14	62.33
GSMUA_Achr4P10900_001	Banana	cytosol	54.88	59.6
VIT_07s0129g00250.t01	Wine grape	cytosol	59.01	56.76
GSMUA_Achr10P...	Banana	cytosol	53.22	56.59
GSMUA_Achr7P26250_001	Banana	cytosol	57.69	55.93
VIT_03s0091g00680.t01	Wine grape	cytosol	57.52	55.77
Bra032187.1-P	Field mustard	cytosol	44.13	55.74
AT2G23050.1	Thale cress	cytosol	44.13	55.51
CDY38923	Canola	cytosol	43.31	55.04
TraesCS4B01G078900.3	Wheat	cytosol	57.52	54.89
KRH04439	Soybean	cytosol	57.02	54.85
CDX89539	Canola	cytosol	43.31	54.7
TraesCS5B01G076500.1	Wheat	cytosol	55.87	54.43
KRH58085	Soybean	cytosol	56.03	54.33
Solyc02g092480.2.1	Tomato	cytosol	55.87	53.82
KRH35678	Soybean	cytosol	55.37	53.69
PGSC0003DMT400064174	Potato	cytosol	55.54	53.5
KRH58082	Soybean	cytosol	55.37	53.34
CDX81314	Canola	cytosol	46.12	53.04
PGSC0003DMT400013928	Potato	cytosol	53.39	52.95
KRH04442	Soybean	cytosol	55.04	52.86
Bra037846.1-P	Field mustard	cytosol	45.95	52.85
CDX81462	Canola	cytosol	52.56	52.74
CDY18660	Canola	cytosol	45.95	52.65
Solyc01g107180.2.1	Tomato	cytosol	54.38	52.56
PGSC0003DMT400066161	Potato	cytosol	54.38	52.56
CDY37223	Canola	cytosol	52.07	52.24
Solyc10g049660.1.1	Tomato	cytosol	52.73	52.21
CDY50369	Canola	cytosol	43.97	51.85
PGSC0003DMT400038537	Potato	cytosol	53.72	51.83
CDY44035	Canola	cytosol	49.26	51.83
Solyc03g044090.2.1	Tomato	cytosol	53.88	51.75
Bra010603.1-P	Field mustard	cytosol	49.09	51.65
AT4G37590.1	Thale cress	cytosol	49.09	51.21
CDY22422	Canola	cytosol	48.43	50.96
AT2G14820.2	Thale cress	cytosol	53.39	50.95
Bra039820.1-P	Field mustard	cytosol	52.4	50.56
CDX72639	Canola	cytosol	48.1	50.35
KRG91101	Soybean	mitochondrion	52.4	50.32
CDY29566	Canola	cytosol	47.93	50.17
Bra017837.1-P	Field mustard	cytosol	47.77	50.0
CDY69095	Canola	cytosol	46.12	49.73
Bra012166.1-P	Field mustard	cytosol	46.12	49.56
AT5G67440.1	Thale cress	cytosol	47.27	49.4
CDY12846	Canola	cytosol	45.29	48.5
TraesCS5B01G222700.2	Wheat	cytosol	43.97	41.76
TraesCS7B01G052800.1	Wheat	cytosol	43.97	40.74
TraesCS5B01G168600.3	Wheat	cytosol	34.05	34.33
TraesCS6B01G237800.1	Wheat	cytosol	34.71	33.55
TraesCS7B01G209700.1	Wheat	cytosol	34.88	32.81
TraesCS3B01G349200.1	Wheat	cytosol	34.38	32.15
TraesCS4B01G255500.1	Wheat	cytosol	30.41	30.41
TraesCS5B01G046200.2	Wheat	mitochondrion	31.74	29.91
TraesCS5B01G377600.1	Wheat	cytosol	33.39	29.79
TraesCS2B01G557300.2	Wheat	cytosol	30.91	28.9
TraesCS6B01G117400.1	Wheat	cytosol	34.71	28.46
TraesCS5B01G145100.1	Wheat	plastid	28.43	27.3
TraesCS5B01G408200.1	Wheat	cytosol	29.42	26.41
TraesCS5B01G461900.4	Wheat	plastid	28.1	25.88
TraesCS5B01G383100.1	Wheat	plastid	27.6	25.54
TraesCS4B01G122300.1	Wheat	cytosol, plastid	23.47	24.87
TraesCS1B01G298700.1	Wheat	cytosol, plastid	15.87	23.19

Protein Annotations

EnsemblPlants:TraesCS4B01G256600.1	EnsemblPlantsGene:TraesCS4B01G256600	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR32370
PANTHER:PTHR32370:SF74	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	SEG:seg
SUPFAM:SSF54695	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:522332822..522336743

Molecular Weight (calculated)

66615.9 Da

IEP (calculated)

8.231

GRAVY (calculated)

-0.310

Length

605 amino acids

Sequence
(BLAST)

001: MKFMKLGSNP DTFQDDGSEV RIVETELVSD ITVRLGNTKF YLHKFPLLSK CARFQKLIPT TGDENIDIHI HDIPGGPKAF EICAKFCYGM VVTLNAYNVV
101: AARCAAEYLE MNETVDKGNL IYKIDVFLSS SIFRSWKDSI IVLGTTKAHL PWSEDLKLVS HCIDSIASKA SVDTSKVEWS YTYNRKKLST ENDLDMQWNG
201: VKKQPSVPKD WWVEDLTDLD IDSYKQVISA IKTMGMVPKD AVGEAIKAYT YKKLPSLSKV SMIHGDGKVR AMLVTITCLL PSEKGSVSCS FLLKLLRATN
301: LLKCGEMCRK ELVKRIGRQL DEASVSDLLI PTVDGETTGY DIDMILSIVE EYVRQDCKNA QKHNAEVNGH VQAPSASMIT VAKVVDGYLT EVAKDPNTPV
401: LKFINLAEAI SGNSRPVHDG IYRAIDMYMK EHPSLSKSDK KKLCCLMDCK KLSPEACAHA VQNERLPLRT VVQVLYHEQT RASAAATVRA DSICIGSYES
501: SRSGATTNTE DEWDGVIAVE DLSLSSKTTK LEKCHSAEKS HGSSKSTTNG KAKGGATPKK VLGKMLSSKA LTGERSSSDS SDSAILRSQD HPKRTPSRST
601: KPSAA

Best Arabidopsis Sequence Match ( AT2G14820.1 )
(BLAST)

001: MKFMKIGSKL DSFKTDGNNV RYVENELASD ISVDVEGSRF CLHKFPLLSK CACLQKLLSS TDKNNIDDID ISGIPGGPTA FETCAKFCYG MTVTLSAYNV
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS

Arabidopsis Description

NPY2BTB/POZ domain-containing protein NPY2 [Source:UniProtKB/Swiss-Prot;Acc:O80970]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.