Factsheet for TraesCS5B01G377600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G385100.1	Wheat	plastid	91.59	97.64
HORVU5Hr1G093120.2	Barley	cytosol	90.56	96.85
TraesCS5A01G375500.3	Wheat	peroxisome	90.27	95.03
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	79.5	85.69
EER91175	Sorghum	cytosol	79.2	85.1
TraesCS5B01G046200.2	Wheat	mitochondrion	67.99	71.81
VIT_10s0003g04490.t01	Wine grape	cytosol	66.08	70.89
GSMUA_Achr4P31620_001	Banana	cytosol	61.21	69.51
GSMUA_Achr5P02440_001	Banana	cytosol	58.41	69.11
Solyc02g021640.2.1	Tomato	nucleus	63.86	68.84
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	63.72	68.68
GSMUA_Achr6P30010_001	Banana	cytosol	55.01	68.07
KRH12771	Soybean	cytosol	64.45	67.96
KRH37734	Soybean	cytosol	63.86	67.34
GSMUA_Achr9P26110_001	Banana	cytosol	58.55	65.51
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	61.65	62.86
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	61.06	62.63
CDY02293	Canola	cytosol, mitochondrion, nucleus	60.77	62.52
CDY09586	Canola	cytosol	60.47	62.5
CDX90249	Canola	cytosol, mitochondrion, nucleus	57.96	62.28
TraesCS7B01G209700.1	Wheat	cytosol	58.11	61.28
CDY27653	Canola	cytosol	52.95	58.09
CDX99692	Canola	cytosol, mitochondrion, nucleus	53.83	56.59
Bra025440.1-P	Field mustard	cytosol	47.79	56.54
TraesCS3B01G349200.1	Wheat	cytosol	48.53	50.85
TraesCS2B01G557300.2	Wheat	cytosol	43.22	45.29
TraesCS5B01G408200.1	Wheat	cytosol	39.68	39.91
TraesCS5B01G383100.1	Wheat	plastid	38.5	39.91
TraesCS1B01G298700.1	Wheat	cytosol, plastid	23.01	37.68
TraesCS4B01G078900.3	Wheat	cytosol	32.01	34.23
TraesCS4B01G256600.1	Wheat	cytosol	29.79	33.39
TraesCS5B01G145100.1	Wheat	plastid	30.68	33.02
TraesCS5B01G461900.4	Wheat	plastid	31.86	32.88
TraesCS5B01G076500.1	Wheat	cytosol	30.09	32.85
TraesCS6B01G117400.1	Wheat	cytosol	34.81	31.98
TraesCS7B01G052800.1	Wheat	cytosol	30.68	31.85
TraesCS4B01G255500.1	Wheat	cytosol	27.73	31.07
TraesCS5B01G222700.2	Wheat	cytosol	29.06	30.93
TraesCS6B01G237800.1	Wheat	cytosol	28.17	30.51
TraesCS5B01G168600.3	Wheat	cytosol	25.22	28.5
TraesCS4B01G122300.1	Wheat	cytosol, plastid	23.16	27.5
CDY12056	Canola	plasma membrane	58.85	24.72

Protein Annotations

EnsemblPlants:TraesCS5B01G377600.1	EnsemblPlantsGene:TraesCS5B01G377600	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR32370	PANTHER:PTHR32370:SF12	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
SEG:seg	SMART:SM00225	SUPFAM:SSF54695	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5B:+:555151211..555154847

Molecular Weight (calculated)

75142.1 Da

IEP (calculated)

6.455

GRAVY (calculated)

-0.137

Length

678 amino acids

Sequence
(BLAST)

001: MSASASVKLG SKPDAFRRQG QAWFCTTGLP SDVTVEVGDM FFHLHKFPLL SKSAVLEQLI EESSDQEECI IKLNDIPGGA KSFEMVARFC YGVKIELSSS
101: NVVHLRCASE HLQMTEEISD DNLIAQTEMF LNQVVLRNWK DSLKALETCD DLLPHAEDLQ IVKRCIESLA SKATTDPNLF GWPIREHGLM QSPGGSVLWN
201: GISTGARPRN FSSDWWYDDV SSLSFPMYKR LLSGMESRRI RPEIIAGSLA YYARKYIPGL SRRNSMGTMP LAGTLSDVEQ RNLLEEIDRL LPVQKGLVPT
301: KLLLGLLKTS MILKASSTCI ANLEKRVGMQ LDQASLEDLL LPNYSYTMET LYNVECVHRI LEHFLAMDQA NGGCSPCIDD MMASPSMIPI TAVAKLLDGY
401: LAEVAPDVNL KPPKFQALAS ALPEYARPLD DGLYRAIDVY LKVDLSSCFD LCLEQLISIL SSEKKLDIHF YLHLHDIILI LCCLQAHSWL SEAEREQLCR
501: LMDCQKLSLE ACTHAAQNER LPLRVVVQVL FFEQLQLRTS IAGCLLVSDN LEGSSRPLRS GGVAMSGEAG GWSAAVRENQ VLKVGMDNMR MRLAELEKEC
601: SGMRQEIEKL GRGGGGKGGG GGGGWASHVP RRFSLKMKPQ ICSTQEGSVS EQHKSMSAKL DKLQAKLSKQ KRQLSADA

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.