Factsheet for GSMUA_Achr4P31620_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P02440_001	Banana	cytosol	74.71	77.84
GSMUA_Achr6P30010_001	Banana	cytosol	65.49	71.35
EER91175	Sorghum	cytosol	70.85	67.04
VIT_10s0003g04490.t01	Wine grape	cytosol	70.85	66.93
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	70.18	66.61
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	69.35	65.82
Solyc02g021640.2.1	Tomato	nucleus	69.35	65.82
GSMUA_Achr9P26110_001	Banana	cytosol	66.33	65.35
HORVU5Hr1G093120.2	Barley	cytosol	69.18	65.14
TraesCS5D01G385100.1	Wheat	plastid	69.01	64.78
KRH12771	Soybean	cytosol	69.51	64.54
KRH37734	Soybean	cytosol	69.18	64.23
GSMUA_Achr5P00550_001	Banana	cytosol	67.0	63.59
TraesCS5A01G375500.3	Wheat	peroxisome	67.0	62.11
TraesCS5B01G377600.1	Wheat	cytosol	69.51	61.21
Os12t0613250-00	Rice	plasma membrane	65.33	60.0
TraesCS5D01G051100.1	Wheat	cytosol	63.48	59.97
TraesCS5A01G042600.1	Wheat	cytosol	63.48	59.87
CDX90249	Canola	cytosol, mitochondrion, nucleus	61.98	58.64
CDY02293	Canola	cytosol, mitochondrion, nucleus	64.32	58.27
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	64.49	58.25
CDY09586	Canola	cytosol	63.99	58.23
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	64.66	58.05
TraesCS5B01G046200.2	Wheat	mitochondrion	61.64	57.32
Bra025440.1-P	Field mustard	cytosol	53.77	56.02
CDY27653	Canola	cytosol	57.79	55.83
CDX99692	Canola	cytosol, mitochondrion, nucleus	58.96	54.57
GSMUA_AchrUn_...	Banana	cytosol	37.69	52.94
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	42.71	50.49
GSMUA_Achr2P02890_001	Banana	cytosol	46.9	49.65
HORVU5Hr1G010370.2	Barley	plastid	63.99	48.42
GSMUA_Achr9P26440_001	Banana	cytosol	41.04	42.1
GSMUA_Achr4P01950_001	Banana	cytosol	28.48	41.67
GSMUA_Achr10P...	Banana	cytosol	38.36	41.41
GSMUA_Achr8P04840_001	Banana	cytosol	40.2	40.82
GSMUA_Achr3P20380_001	Banana	cytosol	36.85	38.26
GSMUA_Achr4P10900_001	Banana	cytosol	34.17	36.62
GSMUA_Achr6P27970_001	Banana	cytosol	31.32	36.17
GSMUA_Achr5P01710_001	Banana	cytosol	35.01	35.97
GSMUA_Achr3P04740_001	Banana	cytosol	34.84	35.25
GSMUA_Achr8P30170_001	Banana	plastid	32.5	34.77
GSMUA_Achr10P...	Banana	cytosol	32.83	34.45
GSMUA_Achr10P...	Banana	cytosol	31.83	33.75
GSMUA_Achr7P21950_001	Banana	plastid	31.66	33.57
GSMUA_Achr1P11260_001	Banana	plastid	32.16	33.51
GSMUA_Achr7P26250_001	Banana	cytosol	34.84	33.33
GSMUA_Achr8P16390_001	Banana	cytosol	28.48	32.57
GSMUA_Achr7P26300_001	Banana	cytosol	32.16	32.43
GSMUA_Achr1P21440_001	Banana	cytosol	33.0	32.4
GSMUA_Achr2P13430_001	Banana	cytosol	36.01	32.04
GSMUA_Achr3P12020_001	Banana	cytosol	27.64	30.22
GSMUA_Achr11P...	Banana	cytosol, plastid	28.98	29.88
GSMUA_Achr5P29690_001	Banana	cytosol, plastid	28.98	28.83
GSMUA_Achr3P14590_001	Banana	cytosol	27.64	28.8
CDY12056	Canola	plasma membrane	62.81	23.23
GSMUA_Achr3P25690_001	Banana	nucleus	35.51	17.76
Os12t0613300-02	Rice	nucleus	1.17	2.36

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr4G31620_001	EnsemblPlants:GSMUA_Achr4P31620_001	EnsemblPlants:GSMUA_Achr4T31620_001	InterPro:IPR000210	InterPro:IPR027356
UniProt:M0STS4	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF12	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI0002959CDA
SEG:seg	:	:	:	:	:

Description

BTB/POZ domain-containing protein At1g30440 [Source:GMGC_GENE;Acc:GSMUA_Achr4G31620_001]

Coordinates

chr4:+:28747386..28750950

Molecular Weight (calculated)

66946.2 Da

IEP (calculated)

8.006

GRAVY (calculated)

-0.236

Length

597 amino acids

Sequence
(BLAST)

001: MACMKLGSKP DAFRQQGQSW FCTTGLPSDL TVEVGDMMFH LHKFPLLSKS GLLEKLIKEN SDKEEAIKLH DVPGGAPAFE LVVKFCYGVK LELNSSNVVR
101: LRYASEHLQM TEEIAEGNLI AQTEIFFNQV VLRSWKDSMK ALQTCSDFLP HAENLQLSKR CIDSLAVKAS TDPNLFGWPM MEHCAMQSPG GSVLWNGIST
201: GARPTNCRSD WWYEDVSSLT FPLYKRLISL MKSRGIRQET IAGSLTFYAK RYLPGLNRHQ NLAHGNFVAA PSEEEQRHLV EEIDSLLPLQ KGVASTKILL
301: GLLRTAIILQ ARTSCISNLE KRIGMQLDQA DLEDLLFPTF AYSTETLYNV DCVKRMLDHF LAMDQATAEV APDTNLKLPK FQMLAAAVPD YARPLDDGLY
401: HAIDIYLKAH PWLSENQREQ LCRLMDSQKL SLEACTHAAQ NERLPLRVVV QVLFFEQLQL RTSVAGCLLV SDNLDGSRLL RSGIACSGEA GGCTPPTAVR
501: ENKDLKVGMD YMRMRVSELE KECTTMKQEI KKLGRGRSRW SSISKKLGFR MKMPLCSAHE DSVSDQQKSK VGKIHKLQAV ITKQKQLLLA DASCHPS

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.