Factsheet for GSMUA_Achr9P19480_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	50.89	60.47
GSMUA_Achr2P02890_001	Banana	cytosol	67.33	60.28
PGSC0003DMT400093531	Potato	cytosol	57.43	53.9
VIT_13s0019g04420.t01	Wine grape	cytosol	61.78	50.4
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	60.79	50.33
KRH32482	Soybean	cytosol	57.62	49.41
KRH21111	Soybean	cytosol	59.6	49.26
Solyc09g007820.1.1	Tomato	cytosol	58.02	49.08
KRH19874	Soybean	cytosol	57.03	48.9
VIT_08s0040g01800.t01	Wine grape	cytosol	60.0	48.56
CDY10395	Canola	cytosol	50.69	47.15
GSMUA_Achr5P02440_001	Banana	cytosol	53.47	47.12
CDX70320	Canola	cytosol	53.07	46.85
GSMUA_Achr6P30010_001	Banana	cytosol	50.3	46.35
AT5G03250.1	Thale cress	cytosol	54.26	46.28
GSMUA_Achr9P26110_001	Banana	cytosol	55.25	46.04
GSMUA_Achr5P00550_001	Banana	cytosol	56.63	45.47
KRG91918	Soybean	cytosol	55.45	45.38
AT5G13600.1	Thale cress	cytosol	53.07	45.35
KRH34860	Soybean	cytosol	54.85	44.82
CDX80858	Canola	cytosol	51.88	44.56
Bra005737.1-P	Field mustard	cytosol	51.68	44.39
CDX85639	Canola	cytosol	50.1	44.23
CDY11245	Canola	cytosol	51.68	43.65
GSMUA_Achr4P31620_001	Banana	cytosol	50.49	42.71
Bra008815.1-P	Field mustard	cytosol	49.51	41.19
CDY09812	Canola	cytosol	49.11	40.79
CDX69627	Canola	cytosol	48.91	40.69
Bra023423.1-P	Field mustard	cytosol	40.79	37.32
CDY72506	Canola	cytosol	9.31	37.01
GSMUA_Achr4P01950_001	Banana	cytosol	29.5	36.52
GSMUA_Achr10P...	Banana	cytosol	38.02	34.72
GSMUA_Achr9P26440_001	Banana	cytosol	39.01	33.85
GSMUA_Achr4P10900_001	Banana	cytosol	36.63	33.21
GSMUA_Achr3P20380_001	Banana	cytosol	37.43	32.87
GSMUA_Achr5P01710_001	Banana	cytosol	36.63	31.84
GSMUA_Achr10P...	Banana	cytosol	34.85	31.26
GSMUA_Achr8P04840_001	Banana	cytosol	36.24	31.12
GSMUA_Achr10P...	Banana	cytosol	35.05	31.11
GSMUA_Achr6P27970_001	Banana	cytosol	31.68	30.95
GSMUA_Achr3P04740_001	Banana	cytosol	35.45	30.34
GSMUA_Achr7P26250_001	Banana	cytosol	37.03	29.97
GSMUA_Achr7P21950_001	Banana	plastid	32.87	29.48
GSMUA_Achr2P13430_001	Banana	cytosol	39.01	29.36
GSMUA_Achr8P16390_001	Banana	cytosol	30.3	29.31
GSMUA_Achr1P21440_001	Banana	cytosol	35.25	29.28
GSMUA_Achr8P30170_001	Banana	plastid	31.29	28.32
GSMUA_Achr7P26300_001	Banana	cytosol	32.28	27.53
GSMUA_Achr3P12020_001	Banana	cytosol	29.11	26.92
GSMUA_Achr1P11260_001	Banana	plastid	30.5	26.88
GSMUA_Achr3P14590_001	Banana	cytosol	28.91	25.48
GSMUA_Achr11P...	Banana	cytosol, plastid	28.32	24.7
GSMUA_Achr5P29690_001	Banana	cytosol, plastid	29.11	24.5
GSMUA_Achr3P25690_001	Banana	nucleus	34.46	14.57

Protein Annotations

EnsemblPlants:GSMUA_Achr9P19480_001	EnsemblPlants:GSMUA_Achr9T19480_001	EnsemblPlantsGene:GSMUA_Achr9G19480_001	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf
PANTHER:PTHR32370	PANTHER:PTHR32370:SF41	PFAM:PF03000	PFscan:PS51649	SUPFAM:SSF54695	UniParc:UPI00029683B3
UniProt:M0U1Q5	MapMan:35.1	:	:	:	:

Description

BTB/POZ domain-containing protein At1g30440 [Source:GMGC_GENE;Acc:GSMUA_Achr9G19480_001]

Coordinates

chr9:+:20907794..20911871

Molecular Weight (calculated)

56576.7 Da

IEP (calculated)

4.903

GRAVY (calculated)

0.081

Length

505 amino acids

Sequence
(BLAST)

001: MNDYLVWQNP IFIHLQVYLM HVSCVDLESI RIIYWNNLYI NQELLSGLLG KMMSEFRSEE GKDCVLQLHD IPGGAKAFEL VAKFCYDIKI ELNALNVVSL
101: RCAAEHLLMT EDYVGGNLIM QTENFLVNQV FGSWKDSVKA LEACESVLPH AEELHIVSRC INSLASKACA DPRETPRSGI ADWWYEDVSF LSLPLFKRLI
201: LAVEANGMKP ENVAGALMFY AKRFLPGLSR NLSFLDGTTR IPPGTSVSAP SESDQRVFLE EIVDLLPMKK GVTSTKFLLG MLRTAMILRA GPSCKENLER
301: RIGTQLDEAA LEDILIPNLG YSVETLYDID CVQRIVDHFM MIDQSSVATS PAIVDEGQLA ASSPLLTPLT MVAKLVDGYL AEVAGDANLK LPKFQSLAAV
401: IPDYARPLDD GIYRAIDIYL KSHPWLTESE KEQLCRLMNC QKLSLEACTH AAQNERLPLR VVVQVLFFEQ LRLRTSIAGW FFVSDNMENS QAPHGCGLWS
501: LRMNV

Best Arabidopsis Sequence Match ( AT5G03250.2 )
(BLAST)

001: MTDNYGEGNL VGMTETFLNE VFGNWTDSIK ALQTCEEVID YAEDLHIISR CVDSLAVKAC ADPSLFNWPV GGGKNATSGQ NTEDESHLWN GISASGKMLQ
101: HTGEDWWFDD ASFLSLPLFK RLITAIEARG MKLENIAMAV MYYTRKHVPL MNRQVNMDEQ VIETPNPSEE DQKTCLEEIV GLLPSKKGVN PTKFLLRLLQ
201: TAMVLHASQS SRENLERRIG NQLDQAALVD LLIPNMGYSE TLYDVECVLR MIEQFVSSTE QAGIVPSPCI IEEGHLVKDG ADLLTPTTLV ATLVDGYLAE
301: VAPDVNLKLA KFEAIAAAIP DYARPLDDGV YHAIDVYLKA HPWITDSERE HICRLMNCQK LSLEASTHAA QNERLPLRVI VQVLFFEQLR LRTSVSGWFF
401: VSENLDNPDN QHGANGGLLK PRGENVRERV SELEKECMNM KQELHKLVRT KRSWKNFTRK LNFKKKSECC KPKDQATPAI

Arabidopsis Description

BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.