CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005737.1-P	Field mustard	cytosol	98.16	99.83
CDX80858	Canola	cytosol	97.83	99.49
AT5G03250.1	Thale cress	cytosol	89.63	90.54
CDX70320	Canola	cytosol	82.44	86.19
CDY10395	Canola	cytosol	78.09	86.0
CDY72506	Canola	cytosol	18.23	85.83
KRH21111	Soybean	cytosol	62.21	60.88
KRH19874	Soybean	cytosol	59.03	59.93
KRH32482	Soybean	cytosol	58.86	59.76
VIT_08s0040g01800.t01	Wine grape	cytosol	62.04	59.46
Solyc09g007820.1.1	Tomato	cytosol	57.86	57.96
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	59.03	57.87
PGSC0003DMT400093531	Potato	cytosol	50.5	56.13
GSMUA_AchrUn_...	Banana	cytosol	38.29	53.88
GSMUA_Achr2P02890_001	Banana	cytosol	50.17	53.19
CDX85639	Canola	cytosol	49.83	52.1
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	43.65	51.68
Zm00001d043271_P001	Maize	cytosol	53.68	49.61
CDX69627	Canola	cytosol	50.33	49.59
TraesCS3B01G349200.1	Wheat	cytosol	53.01	49.0
Os01t0780600-01	Rice	plasma membrane	53.68	48.71
HORVU3Hr1G076740.1	Barley	cytosol	52.34	48.68
TraesCS3A01G317300.1	Wheat	cytosol	52.68	48.54
CDY09812	Canola	cytosol	49.33	48.52
EES03716	Sorghum	cytosol	52.68	48.39
TraesCS3D01G314000.1	Wheat	cytosol	52.68	48.31
CDX90249	Canola	cytosol, mitochondrion, nucleus	50.0	47.39
Zm00001d002146_P001	Maize	cytosol	48.16	46.45
Os04t0636500-01	Rice	plasma membrane	50.0	46.43
CDY09586	Canola	cytosol	50.0	45.58
CDY02293	Canola	cytosol, mitochondrion, nucleus	50.17	45.52
CDY27653	Canola	cytosol	46.66	45.15
TraesCS2B01G557300.2	Wheat	cytosol	48.66	44.98
TraesCS2A01G526900.1	Wheat	cytosol	48.49	44.48
TraesCS2D01G529600.1	Wheat	cytosol	48.33	44.46
EES11510	Sorghum	cytosol	47.16	44.34
CDX99692	Canola	cytosol, mitochondrion, nucleus	47.16	43.72
CDY45241	Canola	cytosol	38.13	38.13
CDX77951	Canola	cytosol	34.62	37.77
CDY72267	Canola	cytosol	31.61	37.35
CDY30765	Canola	cytosol	39.46	37.22
CDY72257	Canola	cytosol	31.44	37.15
CDY38923	Canola	cytosol	29.43	36.97
CDX89539	Canola	cytosol	29.43	36.74
CDX73781	Canola	cytosol	33.28	36.51
CDX81314	Canola	cytosol	31.44	35.74
CDY68489	Canola	cytosol, plastid	26.76	35.63
CDY18660	Canola	cytosol	31.44	35.61
CDY69095	Canola	cytosol	32.44	34.58
CDX83620	Canola	cytosol	31.61	34.55
CDY12846	Canola	cytosol	32.44	34.34
CDY13635	Canola	cytosol	32.61	33.97
CDY29723	Canola	cytosol	39.46	33.86
CDY20341	Canola	cytosol	39.63	33.38
CDY29566	Canola	cytosol	32.11	33.22
CDX72639	Canola	cytosol	31.94	33.05
CDY22422	Canola	cytosol	31.77	33.04
CDX75198	Canola	cytosol	31.77	32.93
CDY44035	Canola	cytosol	31.61	32.87
CDX68790	Canola	cytosol	31.44	32.87
CDY57436	Canola	cytosol	32.78	32.5
CDX86278	Canola	cytosol	33.28	32.1
CDX85365	Canola	cytosol	33.28	32.1
CDY30615	Canola	cytosol	26.59	31.86
CDX73937	Canola	plastid	31.1	31.85
CDY00659	Canola	plastid	31.1	31.79
CDY12841	Canola	cytosol	31.94	31.68
CDY37857	Canola	cytosol	31.77	31.67
CDY57361	Canola	cytosol	26.25	31.46
CDY10743	Canola	cytosol	30.27	31.15
CDX84827	Canola	cytosol	29.43	31.15
CDY52208	Canola	plastid	33.61	31.11
CDY23992	Canola	cytosol	29.26	30.97
CDX89922	Canola	cytosol	32.61	30.95
CDX81462	Canola	cytosol	31.1	30.85
CDY18140	Canola	cytosol	32.44	30.79
CDY02075	Canola	cytosol	29.77	30.69
CDY37223	Canola	cytosol	30.94	30.68
CDX84515	Canola	cytosol	37.12	30.58
CDY18715	Canola	cytosol	36.96	30.52
CDY32492	Canola	cytosol	32.44	30.41
CDY02305	Canola	cytosol	30.77	30.31
CDY37449	Canola	cytosol	24.41	30.04
CDY09561	Canola	cytosol	30.27	29.97
CDX81221	Canola	cytosol	36.45	29.86
CDX69851	Canola	cytosol	30.77	29.21
CDX96986	Canola	cytosol	30.43	29.07
CDY50369	Canola	cytosol	24.92	29.04
CDY17704	Canola	cytosol	26.59	28.34
CDX77798	Canola	cytosol	26.59	28.34
CDX83030	Canola	plastid	24.92	27.85
CDY12056	Canola	plasma membrane	49.67	18.4

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A078F9Y0	InterPro:BTB/POZ_dom	EnsemblPlants:CDY11245	ProteinID:CDY11245
ProteinID:CDY11245.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00049268001
InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097
PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF46	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695
UniPathway:UPA00143	UniParc:UPI0004EEDB96	SEG:seg	:	:	:

Description

BnaA03g00810DBnaA03g00810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9Y0]

Coordinates

chrLK032010:+:348323..351233

Molecular Weight (calculated)

67331.8 Da

IEP (calculated)

5.113

GRAVY (calculated)

-0.256

Length

598 amino acids

Sequence
(BLAST)

001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GFLEKLIEES SSDDGSSCVL SLDDIPGGGK TFELITKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEDV TDHAEDLHII SRCVDSLAIK ACADPSLFNW PKNATSGQNT EDESHLWNGI
201: SPSGKMLQPT DNSRKLILLK CEDWWFDDAS FLNLSLFKRL ITAIESRGMK LENISMAVMY YTKKHVPLMN RQVTMDEQVI ETPNTSEAEQ KDALEEIIGL
301: LPTKKGVNPT KFLLRLLQTA MVLHTSQSSR ENLERLIGNQ LEQAALVDLL IPNMGYSETL YDVECVLRMI EQFVSSTEQA GIVPSPCIIE EGHLVKDGAE
401: MLTPPTLVAT LVDGYLAEVA PDVNLKLAKF EAIAAAVPDY ARPLDDGVYH AVDVFLKAHP WITDSEREHI CRLMNCQKLS LEASAHAAQN ERLPLRVIVQ
501: VLFFEQLRLR TSISSWFFVS ENLDNPEHQN GGNGCVLKPR GENVRERVSE LEKECISMKQ ELQKLVRSKR SWKNFTRKLN FKKKSECCKP KDQEKQAN

Best Arabidopsis Sequence Match ( AT5G03250.1 )
(BLAST)

001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES STDDGSGCVL SLDEIPGGGK TFELVTKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEEV IDYAEDLHII SRCVDSLAVK ACADPSLFNW PVGGGKNATS GQNTEDESHL
201: WNGISASGKM LQHTGEDWWF DDASFLSLPL FKRLITAIEA RGMKLENIAM AVMYYTRKHV PLMNRQVNMD EQVIETPNPS EEDQKTCLEE IVGLLPSKKG
301: VNPTKFLLRL LQTAMVLHAS QSSRENLERR IGNQLDQAAL VDLLIPNMGY SETLYDVECV LRMIEQFVSS TEQAGIVPSP CIIEEGHLVK DGADLLTPTT
401: LVATLVDGYL AEVAPDVNLK LAKFEAIAAA IPDYARPLDD GVYHAIDVYL KAHPWITDSE REHICRLMNC QKLSLEASTH AAQNERLPLR VIVQVLFFEQ
501: LRLRTSVSGW FFVSENLDNP DNQHGANGGL LKPRGENVRE RVSELEKECM NMKQELHKLV RTKRSWKNFT RKLNFKKKSE CCKPKDQATP AI

Arabidopsis Description

BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.