Factsheet for Zm00001d002146_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11510	Sorghum	cytosol	89.19	86.95
Os04t0636500-01	Rice	plasma membrane	70.48	67.86
TraesCS2B01G557300.2	Wheat	cytosol	67.1	64.3
TraesCS2D01G529600.1	Wheat	cytosol	67.1	64.0
TraesCS2A01G526900.1	Wheat	cytosol	66.94	63.65
GSMUA_AchrUn_...	Banana	cytosol	38.06	55.53
CDX70320	Canola	cytosol	47.26	51.22
CDY10395	Canola	cytosol	44.19	50.46
AT5G03250.1	Thale cress	cytosol	48.06	50.34
VIT_08s0040g01800.t01	Wine grape	cytosol	50.48	50.16
Bra005737.1-P	Field mustard	cytosol	46.61	49.15
CDX80858	Canola	cytosol	46.61	49.15
Zm00001d043271_P001	Maize	cytosol	51.13	49.0
VIT_13s0019g04420.t01	Wine grape	cytosol	48.71	48.79
KRH19874	Soybean	cytosol	46.29	48.73
CDY11245	Canola	cytosol	46.45	48.16
KRH32482	Soybean	cytosol	45.65	48.05
Solyc09g007820.1.1	Tomato	cytosol	46.13	47.91
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	46.94	47.7
KRH21111	Soybean	cytosol	46.94	47.63
PGSC0003DMT400093531	Potato	cytosol	41.13	47.4
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	46.45	45.79
AT5G13600.1	Thale cress	cytosol	43.39	45.52
KRH34860	Soybean	cytosol	45.32	45.47
CDX85639	Canola	cytosol	41.77	45.28
KRG91918	Soybean	cytosol	45.0	45.22
Bra008815.1-P	Field mustard	cytosol	43.87	44.81
CDX69627	Canola	cytosol	43.39	44.32
CDY09812	Canola	cytosol	42.9	43.75
Zm00001d035208_P002	Maize	cytosol	45.32	42.38
CDY72506	Canola	cytosol	8.06	39.37
Bra023423.1-P	Field mustard	cytosol	34.19	38.41
Zm00001d033941_P001	Maize	mitochondrion, plastid	36.13	35.5
Zm00001d013182_P003	Maize	cytosol, mitochondrion	37.26	32.86
Zm00001d033344_P001	Maize	cytosol	33.06	32.28
Zm00001d048138_P007	Maize	cytosol	31.94	31.73
Zm00001d013741_P001	Maize	cytosol	32.74	31.57
Zm00001d023313_P001	Maize	plastid	33.39	31.46
Zm00001d045098_P001	Maize	cytosol	32.26	31.4
Zm00001d028056_P001	Maize	cytosol	30.0	31.16
Zm00001d017079_P001	Maize	cytosol	31.29	31.09
Zm00001d004440_P001	Maize	cytosol	31.94	31.03
Zm00001d050959_P001	Maize	cytosol, mitochondrion, plastid	31.29	30.94
Zm00001d030864_P001	Maize	cytosol	31.94	30.89
Zm00001d003297_P001	Maize	mitochondrion	30.32	30.52
Zm00001d019944_P001	Maize	cytosol	28.55	30.46
Zm00001d016898_P001	Maize	cytosol	36.45	30.17
Zm00001d047483_P002	Maize	plastid	31.13	29.83
Zm00001d020512_P001	Maize	cytosol	31.13	29.74
Zm00001d005769_P001	Maize	cytosol	29.52	29.28
Zm00001d005051_P001	Maize	cytosol	25.32	27.21
Zm00001d028075_P010	Maize	endoplasmic reticulum	31.94	24.54
Zm00001d023314_P001	Maize	cytosol	24.19	23.51

Protein Annotations

EntrezGene:100191465	Gene3D:3.30.710.10	MapMan:35.1	UniProt:B4F8W8	EMBL:BT033556	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom
ProteinID:ONM13227.1	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370
PANTHER:PTHR32370:SF77	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI00017B6103	EnsemblPlantsGene:Zm00001d002146
EnsemblPlants:Zm00001d002146_P001	EnsemblPlants:Zm00001d002146_T001	SEG:seg	:	:	:

Description

BTB/POZ domain-containing protein

Coordinates

chr2:-:6773725..6776694

Molecular Weight (calculated)

66979.4 Da

IEP (calculated)

4.727

GRAVY (calculated)

-0.197

Length

620 amino acids

Sequence
(BLAST)

001: MAAPATRVIG SKPADCFQFQ DPNTWTCVSE LASDVVVEVG DTSFHLHKIP LTSRSGTLQK LVNESTGDGS KPCTVRLDDV PGGAEAFLLA ARFCYDVQTE
101: LNAGNAVPLR CAAERLAMTE DYGEGNLVEQ AESFLSEVLA GWSDTVRALG TCDDAVLPAA EDLLIVQRCI DSLADKACAD PTLSGWPMLE YFTAKSLEET
201: AIWTGIGAAG RPRSPGAGWW YDQASSLPLP LYKRLIAAVR SRGMSPENVA GSLMHYARRH LSGLRRLGDN SDGSSRGGAA AVLSGGDQRT LLEEIVAMLP
301: VEKGVAPTRF LLGLLRVATV LHAAAACRDA LERRAGDQLE EAALEDLLIP NTGYSAETLY DVDSVQRMLE QFMMTTPPAF AVLPETTDEG QLVDAPPGEL
401: MPVSSVGKLV DGYLAEVGTD ANLKPSKFQT IAALVPDYAR AIDDGLYRAI DIYLKAHPWL TDSEREQLCR LMNCQKLSLE ACTHAAQNER LPLRVVVQVL
501: FFEQLRLRTT VSGWFFVSDN ADQGSSSDNC VLPRRPDDDL DLAARSEVTT DEDGSAAAQH EPSPAMSVAE IHRPGKPKST LSRLLGKLGL GGRSSSRQRQ
601: QQPPLPGASD KRRRSFDFGC

Best Arabidopsis Sequence Match ( AT5G03250.2 )
(BLAST)

001: MTDNYGEGNL VGMTETFLNE VFGNWTDSIK ALQTCEEVID YAEDLHIISR CVDSLAVKAC ADPSLFNWPV GGGKNATSGQ NTEDESHLWN GISASGKMLQ
101: HTGEDWWFDD ASFLSLPLFK RLITAIEARG MKLENIAMAV MYYTRKHVPL MNRQVNMDEQ VIETPNPSEE DQKTCLEEIV GLLPSKKGVN PTKFLLRLLQ
201: TAMVLHASQS SRENLERRIG NQLDQAALVD LLIPNMGYSE TLYDVECVLR MIEQFVSSTE QAGIVPSPCI IEEGHLVKDG ADLLTPTTLV ATLVDGYLAE
301: VAPDVNLKLA KFEAIAAAIP DYARPLDDGV YHAIDVYLKA HPWITDSERE HICRLMNCQK LSLEASTHAA QNERLPLRVI VQVLFFEQLR LRTSVSGWFF
401: VSENLDNPDN QHGANGGLLK PRGENVRERV SELEKECMNM KQELHKLVRT KRSWKNFTRK LNFKKKSECC KPKDQATPAI

Arabidopsis Description

BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.