Factsheet for Zm00001d013182_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d013027_P002
Zm00001d013489_P001
Zm00001d021864_P001
Zm00001d021867_P001
Zm00001d025877_P001
Zm00001d025878_P001
Zm00001d025884_P001
Zm00001d034575_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66560.1	Zm00001d013489_P001	AT1G03140.1	21798944
AT5G66560.1	Zm00001d021864_P001	AT1G03140.1	21798944
AT5G66560.1	Zm00001d021867_P001	AT1G03140.1	21798944
AT5G66560.1	Zm00001d025877_P001	AT1G03140.1	21798944
AT5G66560.1	Zm00001d025878_P001	AT1G03140.1	21798944
AT5G66560.1	Zm00001d025884_P001	AT1G03140.1	21798944
AT5G66560.1	Zm00001d013027_P002	AT5G66720.1	21798944
AT5G66560.1	Zm00001d034575_P001	AT5G66720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93390	Sorghum	cytosol	92.32	96.01
Os03t0767600-01	Rice	cytosol	81.93	84.33
TraesCS5A01G403400.1	Wheat	cytosol	78.52	81.66
TraesCS5B01G408200.1	Wheat	cytosol	78.09	81.45
TraesCS5D01G413400.1	Wheat	cytosol	77.95	81.43
HORVU5Hr1G098170.1	Barley	cytosol, mitochondrion	77.38	79.42
GSMUA_Achr8P04840_001	Banana	cytosol	46.09	55.1
VIT_00s0207g00230.t01	Wine grape	cytosol	47.8	52.91
Zm00001d033941_P001	Maize	mitochondrion, plastid	47.37	52.77
KRH08351	Soybean	cytosol	48.22	52.31
Solyc02g090070.2.1	Tomato	nucleus	47.94	51.77
KRH28552	Soybean	cytosol	43.53	51.69
CDY45241	Canola	cytosol	43.39	51.0
PGSC0003DMT400026008	Potato	cytosol	47.51	50.68
AT3G50840.1	Thale cress	cytosol	40.83	50.44
KRH69999	Soybean	endoplasmic reticulum	48.36	50.0
KRH76914	Soybean	cytosol	35.85	49.41
CDY30765	Canola	cytosol	44.38	49.21
CDX73781	Canola	cytosol	37.55	48.44
CDX77951	Canola	cytosol	37.55	48.18
Bra012082.1-P	Field mustard	cytosol	45.23	47.53
AT5G66560.1	Thale cress	cytosol	45.09	47.46
Bra036858.1-P	Field mustard	cytosol	38.41	47.04
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	38.69	43.24
Zm00001d035208_P002	Maize	cytosol	36.7	38.91
Zm00001d002146_P001	Maize	cytosol	32.86	37.26
Zm00001d043271_P001	Maize	cytosol	33.71	36.63
Zm00001d028056_P001	Maize	cytosol	26.6	31.32
Zm00001d005051_P001	Maize	cytosol	25.6	31.2
Zm00001d023313_P001	Maize	plastid	29.16	31.16
Zm00001d047483_P002	Maize	plastid	28.31	30.76
Zm00001d004440_P001	Maize	cytosol	27.74	30.56
Zm00001d045098_P001	Maize	cytosol	27.17	29.98
Zm00001d003297_P001	Maize	mitochondrion	25.75	29.38
Zm00001d017079_P001	Maize	cytosol	25.75	29.01
Zm00001d050959_P001	Maize	cytosol, mitochondrion, plastid	25.75	28.87
Zm00001d030864_P001	Maize	cytosol	26.03	28.55
Zm00001d048138_P007	Maize	cytosol	25.18	28.37
Zm00001d033344_P001	Maize	cytosol	25.32	28.03
Zm00001d020512_P001	Maize	cytosol	25.75	27.89
Zm00001d005769_P001	Maize	cytosol	24.61	27.68
Zm00001d013741_P001	Maize	cytosol	25.04	27.37
Zm00001d016898_P001	Maize	cytosol	28.88	27.1
Zm00001d023314_P001	Maize	cytosol	23.76	26.18
GSMUA_Achr3P25690_001	Banana	nucleus	42.96	25.29
Zm00001d019944_P001	Maize	cytosol	20.34	24.61
Zm00001d028075_P010	Maize	endoplasmic reticulum	25.04	21.81

Protein Annotations

EnsemblPlants:Zm00001d013182_P003	EnsemblPlants:Zm00001d013182_T003	EnsemblPlantsGene:Zm00001d013182	EntrezGene:100191409	InterPro:IPR027356	InterPro:NPH3_dom
InterPro:SKP1/BTB/POZ_sf	ncoils:Coil	PANTHER:PTHR32370	PANTHER:PTHR32370:SF8	PFAM:PF03000	PFscan:PS51649
ProteinID:AQK62612.1	SEG:seg	SUPFAM:SSF54695	UniParc:UPI000844E918	UniProt:A0A1D6GGD3	MapMan:35.1

Description

BTB/POZ domain-containing protein

Coordinates

chr5:-:6080869..6083617

Molecular Weight (calculated)

76318.5 Da

IEP (calculated)

5.439

GRAVY (calculated)

-0.326

Length

703 amino acids

Sequence
(BLAST)

001: MMQGRRKNTR EMAREHPQPP PVAAAAASAA SSKGQAWFCT TGLPSDVVIE VGDMTFHVQF PLMSRSKKLH DLITNKESRE ASRRGRGAEQ EEDVGEIREE
101: EADLVLEEDE EAGVHRIHLL EFPGGAEAFE LAAKFCYGVK LDLTPATAAP LRCAAERLGM SDDHSDDNLV SRADRFISQT VLRNPRDAIR ALKSCEGLLP
201: LADDLGLVSR CVDAVAAKAA ASTPTALFGW PIADDDRAGE RQRRKNAAAA AGATWSDDLA GLSLATFTRV IAAMKERGVG PEVIEGALIA YAKRSIPGLS
301: RTGRHVGGGG GTAAAPPSSD VEEQKALLET VIANLPEETI KSTAHTGTAV GATTARVLFG LLRTASILHA SEASRDMLER RIAARLPDAA VDDLLIPSYS
401: YLVETLYDVD GVERIVRYFL EGRDVADEGN EEEGSEAETP GREASRRAML SVGRLVDAYL GEIATDANLK PDKFCDLAWA LPDGARVYDD GLYRAVDIYL
501: KAREQRVLVI FWLASLFWLV SLQAHPGLSE EEKEKVSGVV DGRKLTLEAC THAAQNERLP LRTVVQVLFF EQLQLRRAIA QTIMANEGGA AGSGEEGGES
601: DGGGTWRVAA RGNQMLRLDM DSMRNRVQEL ERECTSMRKA IDKMDRRGGA PVDRGAPSVP PADGRWGAIV TKRFGCKFPA QVCQSQQRTV VARTRRPRIE
701: QSP

Best Arabidopsis Sequence Match ( AT5G66560.1 )
(BLAST)

001: MASEKSTSKG QAWFCTTGLP SDIEIEVDDM TFHLHKFPLM SKSRKLHRLI TEQETRSSSS MALITVIDPK VEETDKKGKG HEIEDDKEEE EVEEQEIEEN
101: GYPHIKLEDF PGSSESFEMV AKFCYGVKMD LSASTVVPLR CAAEHLEMTE EYSPDNLISK TERFLSHSVY KSLRESIKAL KACESVSPLA GSLGITEQCI
201: DSIVSRASSA DPSLFGWPVN DGGGRGNISA TDLQLIPGGA AKSRKKPSRD SNMELWFEDL TQLSLPIFKT VILSMRSGDL SSDIIESCLI CYAKKHIPGI
301: LRSNRKPPSS SSTAVSENEQ RELLETITSN LPLDKSSISS TTRFLFGLLR TAIILNAAEI CRDLLERKIG SQLERATLDD LLVPSYSYLN ETLYDVDLVE
401: RILGHFLDTL EQSNTAIVEV DGKSPSLMLV GKLIDGFLAE IASDANLKSD KFYNLAISLP DQARLYDDGL YRAVDVYLKA HPWVSEAERE KICGVMDCQK
501: LTLEACTHAA QNERLPLRAV VQVLFFEQLQ LRHAIAGTLL AAQSPSTSQS TEPRPSAAIR NLTITEEDGD EAEGERQVDA GKWKKTVREN QVLRLDMDTM
601: RTRVHRLERE CSNMKKVIAK IDKEGSSPAT TTDRPRSWSI TKKFGCKFKT QVCDSHEATM VDHRSRRS

Arabidopsis Description

BTB/POZ domain-containing protein At5g66560 [Source:UniProtKB/Swiss-Prot;Acc:Q94A73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.