Factsheet for Zm00001d047483_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
cytosol 1
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92601	Sorghum	plastid	97.22	95.16
TraesCS5D01G463700.1	Wheat	plastid	84.7	83.92
Os03t0347700-01	Rice	mitochondrion, plastid	87.02	83.9
TraesCS7A01G184200.2	Wheat	plastid	85.78	83.08
HORVU1Hr1G055870.1	Barley	plastid	84.54	82.26
TraesCS5B01G461900.4	Wheat	plastid	81.76	80.52
GSMUA_Achr8P30170_001	Banana	plastid	59.35	68.82
GSMUA_Achr1P11260_001	Banana	plastid	59.97	67.71
VIT_07s0104g01440.t01	Wine grape	plastid	61.98	63.55
KRH31912	Soybean	cytosol	61.05	62.9
KRH71541	Soybean	plastid	60.9	62.54
KRH68133	Soybean	cytosol, plastid	60.59	62.32
PGSC0003DMT400029528	Potato	cytosol	49.0	62.28
Solyc09g074630.2.1	Tomato	cytosol	49.15	62.23
KRG96392	Soybean	plastid	60.12	61.94
AT1G03010.1	Thale cress	cytosol	56.57	57.73
CDX89922	Canola	cytosol	55.95	57.46
Bra033365.1-P	Field mustard	cytosol	55.95	57.46
CDY18140	Canola	cytosol	55.49	56.98
Bra029894.1-P	Field mustard	plastid	56.26	56.35
CDY32492	Canola	cytosol	55.49	56.27
Bra032564.1-P	Field mustard	cytosol, plastid	55.49	56.27
CDY52208	Canola	plastid	55.95	56.04
CDX83030	Canola	plastid	45.6	55.14
AT2G47860.3	Thale cress	plastid	55.49	54.56
CDY37449	Canola	cytosol	38.95	51.85
Zm00001d023313_P001	Maize	plastid	39.57	38.91
Zm00001d028056_P001	Maize	cytosol	33.38	36.18
Zm00001d005051_P001	Maize	cytosol	29.98	33.62
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	32.15	33.07
Zm00001d043271_P001	Maize	cytosol	32.92	32.92
Zm00001d004440_P001	Maize	cytosol	31.68	32.13
Zm00001d033941_P001	Maize	mitochondrion, plastid	30.91	31.7
Zm00001d002146_P001	Maize	cytosol	29.83	31.13
Zm00001d035208_P002	Maize	cytosol	31.84	31.07
Zm00001d023314_P001	Maize	cytosol	29.68	30.09
Zm00001d003297_P001	Maize	mitochondrion	27.36	28.73
Zm00001d013182_P003	Maize	cytosol, mitochondrion	30.76	28.31
Zm00001d017079_P001	Maize	cytosol	27.2	28.21
Zm00001d048138_P007	Maize	cytosol	26.74	27.72
Zm00001d033344_P001	Maize	cytosol	27.2	27.72
Zm00001d016898_P001	Maize	cytosol	31.99	27.64
Zm00001d030864_P001	Maize	cytosol	26.74	26.99
Zm00001d020512_P001	Maize	cytosol	27.05	26.96
Zm00001d050959_P001	Maize	cytosol, mitochondrion, plastid	26.12	26.95
Zm00001d013741_P001	Maize	cytosol	26.74	26.91
Zm00001d045098_P001	Maize	cytosol	26.43	26.84
Zm00001d005769_P001	Maize	cytosol	25.5	26.4
Zm00001d019944_P001	Maize	cytosol	23.34	25.99
Zm00001d028075_P010	Maize	endoplasmic reticulum	26.43	21.19

Protein Annotations

EnsemblPlants:Zm00001d047483_P002	EnsemblPlants:Zm00001d047483_T002	EnsemblPlantsGene:Zm00001d047483	EntrezGene:103639140	InterPro:IPR027356	InterPro:NPH3_dom
InterPro:SKP1/BTB/POZ_sf	ncoils:Coil	PANTHER:PTHR32370	PANTHER:PTHR32370:SF30	PFAM:PF03000	PFscan:PS51649
ProteinID:AQL06687.1	SEG:seg	SUPFAM:SSF54695	UniParc:UPI0004DE7BC4	UniProt:A0A1D6PAD5	MapMan:35.1

Description

Putative phototropic-resoponsive NPH3 family protein

Coordinates

chr9:+:131741474..131744323

Molecular Weight (calculated)

69932.6 Da

IEP (calculated)

9.337

GRAVY (calculated)

-0.027

Length

647 amino acids

Sequence
(BLAST)

001: MGVATVTELK QSISGKRTFR PSLISRHANE WPPTDVSSDL TVEVGTSSFA LHKLFAQFPL VSRSGKIRRL VAEAKDAKLA RLSLHGTPGG APAFELAAKF
101: CYGVHVDVTV ANVAMLRCAA HYLQITDDFS DKSLELRAEA FLRDAVLPSI ASSVAVLRSC EALLPAAEDV GLVPRLIAAV ATNVCKEQLT SGLSKLDQCA
201: QLKPAAAFAD LDPPADWWGK SVAALGLDFF QRLLSAVKAK GLKQETVTRI LINYAQNALH GLMARDVHRC GGADADAVKK QRAVVEAIVG LLPAQSRKSP
301: VPMAFLSGLL KTSMAVSASS ICRADLEKRI GMQMDQAILE DILIAAGAAV GAPAGQQHAL YDTDVVARIF SVFLNLDDDH NEEDDGFDYD SPRSPKQSLL
401: VKAAKLLDSY LAEVALDSNI LPSKFISLAE LLPDHARVVT DGLYRAVDIF LKVHPNIKEA ERYRLCKAID CQRLTPDACS HAAQNERLPV QMAVQVLYFE
501: QLRLRSAIQA GGGSSMGGHD GAVFFGCAAA AASVQGSVNM RSGSGVGSGA MSPRDNYASV RRENRELKLE VARMRMRLTD LEKDHVSMKR ELVRVGPANR
601: LLRGLARSLG RLFRMRPAAE PGLQQLGAKA TADAKVLFQR RRRHSIS

Best Arabidopsis Sequence Match ( AT1G03010.1 )
(BLAST)

001: MGLVTVGELK PAFTGKRGFR LNSTIRHASE WPISDVSSDL TVQVGSSSFC LHKFPLVSRS GKIRKLLADP KISNVCLSNA PGGSEAFELA AKFCYGINIE
101: INLLNIAKLR CASHYLEMTE DFSEENLASK TEHFLKETIF PSILNSIIVL HHCETLIPVS EDLNLVNRLI IAVANNACKE QLTSGLLKLD YSFSGTNIEP
201: QTPLDWWGKS LAVLNLDFFQ RVISAVKSKG LIQDVISKIL ISYTNKSLQG LIVRDPKLEK ERVLDSEGKK KQRLIVETIV RLLPTQGRRS SVPMAFLSSL
301: LKMVIATSSS ASTGSCRSDL ERRIGLQLDQ AILEDVLIPI NLNGTNNTMY DIDSILRIFS IFLNLDEDDE EEEHHHLQFR DETEMIYDFD SPGSPKQSSI
401: LKVSKLMDNY LAEIAMDPNL TTSKFIALAE LLPDHARIIS DGLYRAVDIY LKVHPNIKDS ERYRLCKTID SQKLSQEACS HAAQNERLPV QMAVQVLYFE
501: QIRLRNAMSS SIGPTQFLFN SNCHQFPQRS GSGAGSGAIS PRDNYASVRR ENRELKLEVA RMRMRLTDLE KDHISIKQEL VKSNPGTKLF KSFAKKISKL
601: NSLFSFSSLK PSLSGKASSE SRFLFQRKRR HSVS

Arabidopsis Description

BTB/POZ domain-containing protein At1g03010 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA69]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.