Factsheet for Os03t0347700-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047483_P002	Maize	plastid	83.9	87.02
OQU92601	Sorghum	plastid	85.39	86.69
TraesCS5D01G463700.1	Wheat	plastid	81.22	83.46
TraesCS7A01G184200.2	Wheat	plastid	82.86	83.23
HORVU1Hr1G055870.1	Barley	plastid	81.67	82.41
TraesCS5B01G461900.4	Wheat	plastid	78.24	79.91
GSMUA_Achr8P30170_001	Banana	plastid	56.18	67.56
GSMUA_Achr1P11260_001	Banana	plastid	57.68	67.54
Solyc09g074630.2.1	Tomato	cytosol	48.29	63.41
VIT_07s0104g01440.t01	Wine grape	plastid	59.46	63.23
PGSC0003DMT400029528	Potato	cytosol	47.84	63.06
KRH31912	Soybean	cytosol	58.12	62.1
KRH68133	Soybean	cytosol, plastid	58.12	62.0
KRH71541	Soybean	plastid	57.97	61.75
KRG96392	Soybean	plastid	57.68	61.62
CDY18140	Canola	cytosol	54.99	58.57
CDX89922	Canola	cytosol	54.99	58.57
Bra033365.1-P	Field mustard	cytosol	54.99	58.57
AT1G03010.1	Thale cress	cytosol	55.29	58.52
CDY32492	Canola	cytosol	54.99	57.84
Bra032564.1-P	Field mustard	cytosol, plastid	54.99	57.84
Bra029894.1-P	Field mustard	plastid	53.8	55.88
CDY52208	Canola	plastid	53.65	55.73
AT2G47860.3	Thale cress	plastid	53.8	54.86
CDX83030	Canola	plastid	43.37	54.39
CDY37449	Canola	cytosol	39.2	54.12
Os11t0118500-00	Rice	plastid	38.0	39.66
Os12t0117600-01	Rice	plastid	38.0	39.17
Os03t0206700-00	Rice	plasma membrane	34.43	36.9
Os08t0130600-01	Rice	plasma membrane	32.04	33.54
Os12t0117400-01	Rice	plasma membrane	28.32	33.33
Os12t0613250-00	Rice	plasma membrane	32.19	33.23
Os04t0636500-01	Rice	plasma membrane	31.45	32.76
Os01t0780600-01	Rice	plasma membrane	31.3	31.87
Os03t0738900-00	Rice	nucleus, plasma membrane, plastid	30.55	31.25
Os11t0118300-01	Rice	cytosol, mitochondrion, nucleus	28.32	30.79
Os03t0767600-01	Rice	cytosol	30.25	29.72
Os09t0420900-01	Rice	cytosol	26.23	28.48
Os03t0205700-01	Rice	cytosol	25.48	28.26
Os03t0609800-02	Rice	cytosol	26.23	27.76
Os06t0184500-00	Rice	cytosol	26.53	27.64
Os04t0477000-01	Rice	cytosol, mitochondrion, plastid	25.78	27.59
Os02t0568200-00	Rice	cytosol	31.3	27.56
Os12t0583500-01	Rice	cytosol, plasma membrane	25.48	26.8
Os09t0266600-01	Rice	cytosol	15.65	25.24
Os02t0594700-01	Rice	cytosol, mitochondrion	6.86	24.21
Os12t0613300-02	Rice	nucleus	0.6	1.35

Protein Annotations

EnsemblPlants:Os03t0347700-01	EnsemblPlantsGene:Os03g0347700	EntrezGene:4332827	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf
ncoils:Coil	PANTHER:PTHR32370	PANTHER:PTHR32370:SF30	PFAM:PF03000	PFscan:PS51649	ProteinID:ABF95913.1
ProteinID:BAF12014.1	ProteinID:BAS84175.1	RefSeq:XP_015629090.1	SEG:seg	SUPFAM:SSF54695	UniParc:UPI0000DB4246
UniProt:Q10LI7	MapMan:35.1	:	:	:	:

Description

NPH3 domain containing protein. (Os03t0347700-01)

Coordinates

chr3:-:13024332..13027005

Molecular Weight (calculated)

71509.3 Da

IEP (calculated)

9.216

GRAVY (calculated)

0.007

Length

671 amino acids

Sequence
(BLAST)

001: MGVATVTELR QSFSGKRALR PTLTSRHANE WPPTDVSSDL TVEVGTSSFA LHKLLAQFPL VSRSGKIRRA VAEAKDGKLA RLGLHGTPGG AAAFELAAKF
101: CYGVGVDVTV GNVAMLRCAA HYLQMTEDFS DKNLELRAEA FLRDAVLPSI AGSVAVLRSC EALLPAAEDV NLVPRLIAAI ANNVCKEQLT SGLSKLDQLK
201: PPPPPQAVVV AAAAAGDLDS PGDWWGKSVA GLGLDFFQRL LSAVKSKGLK QETVTRILIN YAQNSLHGLM ARDIAAAAKC GGGGGDTDAV KKQRAVVETI
301: VGLLPAQSKK SPVPMAFLSG LLKTAMAASA SSICRADLEK RIGMQLDQAI LEDILVAAGP VSAAAAAAAV EHTLYDTDVV ARIFAVFLNL DDDSNDEDAV
401: VVGGGCGAFD YDSPRSPKQS LLVKASKLLD SYLAEIALDS NLLPSKFISL AELLPDHARL VTDGLYRAVD IFLKVHPNIK EAERYRMCKA IDCQRLTPDA
501: CSHAAQNERL PVQMAVQVLY FEQLRLRSAI QATGTTTTTT NTSIGGAHDA ALFFGCAAAA AAPRSGSGVG SGAMSPRDSY ASVRRENREL KLEVARMRMR
601: LTDLEKDQVS MRRELVRVGP ANRLLRGLAR RLGSLFHFRG AAAEPGLQQL GAKATADAKV LFQRRRRHSI S

Best Arabidopsis Sequence Match ( AT1G03010.1 )
(BLAST)

001: MGLVTVGELK PAFTGKRGFR LNSTIRHASE WPISDVSSDL TVQVGSSSFC LHKFPLVSRS GKIRKLLADP KISNVCLSNA PGGSEAFELA AKFCYGINIE
101: INLLNIAKLR CASHYLEMTE DFSEENLASK TEHFLKETIF PSILNSIIVL HHCETLIPVS EDLNLVNRLI IAVANNACKE QLTSGLLKLD YSFSGTNIEP
201: QTPLDWWGKS LAVLNLDFFQ RVISAVKSKG LIQDVISKIL ISYTNKSLQG LIVRDPKLEK ERVLDSEGKK KQRLIVETIV RLLPTQGRRS SVPMAFLSSL
301: LKMVIATSSS ASTGSCRSDL ERRIGLQLDQ AILEDVLIPI NLNGTNNTMY DIDSILRIFS IFLNLDEDDE EEEHHHLQFR DETEMIYDFD SPGSPKQSSI
401: LKVSKLMDNY LAEIAMDPNL TTSKFIALAE LLPDHARIIS DGLYRAVDIY LKVHPNIKDS ERYRLCKTID SQKLSQEACS HAAQNERLPV QMAVQVLYFE
501: QIRLRNAMSS SIGPTQFLFN SNCHQFPQRS GSGAGSGAIS PRDNYASVRR ENRELKLEVA RMRMRLTDLE KDHISIKQEL VKSNPGTKLF KSFAKKISKL
601: NSLFSFSSLK PSLSGKASSE SRFLFQRKRR HSVS

Arabidopsis Description

BTB/POZ domain-containing protein At1g03010 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA69]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.