Factsheet for Os03t0206700-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G255500.1	Wheat	cytosol	77.48	79.25
HORVU4Hr1G069480.3	Barley	cytosol	77.0	78.63
TraesCS4B01G255500.1	Wheat	cytosol	75.88	78.51
TraesCS4A01G049300.1	Wheat	cytosol	76.04	78.29
Zm00001d028056_P001	Maize	cytosol	67.41	70.69
KXG39906	Sorghum	cytosol	69.17	70.41
GSMUA_Achr7P26300_001	Banana	cytosol	57.35	60.64
CDY68489	Canola	cytosol, plastid	41.85	58.35
Solyc02g092560.2.1	Tomato	cytosol, nucleus	55.27	58.05
KRH04469	Soybean	cytosol	52.88	56.78
KRH77099	Soybean	cytosol	54.79	55.5
CDY37857	Canola	cytosol	53.19	55.5
KRH58066	Soybean	cytosol	52.08	55.25
VIT_07s0129g00380.t01	Wine grape	cytosol	55.91	55.03
AT5G67385.1	Thale cress	cytosol	52.88	54.8
KRH28386	Soybean	cytosol	54.95	54.6
CDY12841	Canola	cytosol	52.4	54.39
Bra012158.1-P	Field mustard	cytosol	51.92	54.08
CDY57436	Canola	cytosol	51.92	53.9
AT3G49970.2	Thale cress	extracellular	42.17	51.26
Solyc02g064720.2.1	Tomato	cytosol	49.52	51.24
PGSC0003DMT400033866	Potato	cytosol	49.04	51.08
Bra031830.1-P	Field mustard	cytosol	44.73	50.72
CDY30615	Canola	cytosol	40.26	50.5
CDY57361	Canola	cytosol	40.1	50.3
Bra036043.1-P	Field mustard	cytosol	40.73	46.53
Os11t0118500-00	Rice	plastid	37.38	36.39
Os12t0117600-01	Rice	plastid	37.06	35.64
Os03t0347700-01	Rice	mitochondrion, plastid	36.9	34.43
Os12t0117400-01	Rice	plasma membrane	30.51	33.51
Os08t0130600-01	Rice	plasma membrane	32.43	31.67
Os11t0118300-01	Rice	cytosol, mitochondrion, nucleus	30.51	30.96
Os04t0636500-01	Rice	plasma membrane	31.79	30.9
Os12t0613250-00	Rice	plasma membrane	31.47	30.31
Os01t0780600-01	Rice	plasma membrane	30.99	29.44
Os03t0205700-01	Rice	cytosol	28.27	29.26
Os03t0738900-00	Rice	nucleus, plasma membrane, plastid	30.19	28.81
Os04t0477000-01	Rice	cytosol, mitochondrion, plastid	28.27	28.23
Os06t0184500-00	Rice	cytosol	28.91	28.11
Os02t0568200-00	Rice	cytosol	33.87	27.82
Os12t0583500-01	Rice	cytosol, plasma membrane	27.8	27.27
Os03t0609800-02	Rice	cytosol	27.48	27.13
Os03t0767600-01	Rice	cytosol	29.55	27.09
Os09t0266600-01	Rice	cytosol	17.25	25.96
Os09t0420900-01	Rice	cytosol	25.56	25.89
Os02t0594700-01	Rice	cytosol, mitochondrion	5.91	19.47
Os12t0613300-02	Rice	nucleus	0.16	0.34

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:4331999	ProteinID:AAN77296.1	ProteinID:ABF94554.1	ProteinID:BAS82870.1
InterPro:BTB/POZ_dom	ncoils:Coil	ProteinID:EEE58548.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	EnsemblPlantsGene:Os03g0206700	EnsemblPlants:Os03t0206700-00	PFAM:PF00651
PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF14	UniProt:Q8H069
InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI00000ADC2A	RefSeq:XP_015633069.1	SEG:seg	:

Description

BTB/POZ fold domain containing protein. (Os03t0206700-00)

Coordinates

chr3:-:5589846..5592643

Molecular Weight (calculated)

68025.8 Da

IEP (calculated)

8.203

GRAVY (calculated)

-0.300

Length

626 amino acids

Sequence
(BLAST)

001: MQAEARFVSP AMKRTSDWIL SQELPSDITI KVDDAAFNLH KLPLASRCGY IKKQVSGVGG NKATHLEIAG MPGGSKSFEL VVKFCYGVNF EITVDNVAML
101: RCAGEHLEMT EECRPGNLVG RTEAYLEEVA LASLEGAVAV LRKAEELLPA SEEKARLVAR CIDAVASIVC GGDGQFSMSL GTPGGGGGGG YNGVGAAASR
201: EVDDWCADEL TALRIDTFQR VMIAMKARGF KGIAMGTLIM LYAQKSLRRL DMHGRDRKKM GARQEHEKRV VLETIVSLLP RERNTLSVSF LSMLLRAAIH
301: LDTTLACRLD LEKRMAAQLG QAVLDDLLIP SSSPDAAAAT TAYDIDAVQR ILAGYLDLDY TTDPPPRLDY TTDDDFSSAA SPPHSDVAQV GRLMDSYLAE
401: IASDENLSVD KFTALAELIP ERARFNEDGM YRAIDIYLKA HPSLAEGERK KVCRAMDCQK LSREACAHAA QNDRLPVQTV VQVLYHEQRR LRAPSQPPSA
501: APSYAGGESP ALSYRPTPSF NGRHRPGVPD EVSRLQREND ELRMELLRMK MRLRDPSVAF SAGGVPPSGR PPLPKKPGGG GGGSSGGFMN SMSKKLGRLN
601: PFLRSDVLGG GRVRTKPPKD RRHSIS

Best Arabidopsis Sequence Match ( AT5G67385.1 )
(BLAST)

001: MSAKKKDLLS SAMKRTSEWI SSQEVSSDVT VHVGEASFSL HKFPLMSKCG FIKKLVSESS KDSDSTVIKI PDIPGGSEAF ELAAKFCYGI NFDMSTENIA
101: MLRCAAEYLE MTEEHSVENL VVRAEAYLNE VALKSLSSSI TVLHKSEKLL PIAERVKLVS RCIDAIAYMT CQESHFCSPS SSNSGNNEVV VQQQSKQPVV
201: DWWAEDLTVL RIDSFQRVLI AMMARGFKQY GLGPVLMLYA QKSLRGLEIF GKGMKKIEPK QEHEKRVILE TIVSLLPREK NAMSVSFLSM LLRAAIFLET
301: TVACRLDLEN RMGLQLGQAV LDDLLIPSYS FTGDHSMFDT DTVQRILMNY LEFEVEGVRL SNNGVDLAGD MERVGKLLEN YMAEIASDRN VSLQKFIGLA
401: ELIPEQSRVT EDGMYRAVDI YLKAHPNMSD VERKKVCSLM DCQKLSREAC AHAAQNDRLP VQTIVQVLYY EQQRLRGEVT NDSDSPAPPP PQPAAVLPPK
501: LSSYTDELSK LKRENQDLKL ELLKMKMKLK EFEKESEKKT SSSTISTNPS SPISTASTGK PPLPRKSFIN SVSKKLGKLN PFSITPYNGR GRTKPPKDRR
601: HSIS

Arabidopsis Description

SR1IP1BTB/POZ domain-containing protein At5g67385 [Source:UniProtKB/Swiss-Prot;Acc:Q66GP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.