CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028056_P001	Maize	cytosol	84.39	86.93
TraesCS4D01G255500.1	Wheat	cytosol	71.06	71.41
TraesCS4B01G255500.1	Wheat	cytosol	70.24	71.41
TraesCS4A01G049300.1	Wheat	cytosol	69.59	70.39
HORVU4Hr1G069480.3	Barley	cytosol	69.92	70.15
Os03t0206700-00	Rice	plasma membrane	70.41	69.17
CDY68489	Canola	cytosol, plastid	42.93	58.8
GSMUA_Achr7P26300_001	Banana	cytosol	56.42	58.61
Solyc02g092560.2.1	Tomato	cytosol, nucleus	54.96	56.71
KRH77099	Soybean	cytosol	55.77	55.5
CDY37857	Canola	cytosol	53.82	55.17
KRH58066	Soybean	cytosol	52.85	55.08
KRH04469	Soybean	cytosol	52.2	55.06
AT5G67385.1	Thale cress	cytosol	53.82	54.8
VIT_07s0129g00380.t01	Wine grape	cytosol	56.42	54.56
KRH28386	Soybean	cytosol	55.77	54.44
Bra012158.1-P	Field mustard	cytosol	53.17	54.41
CDY12841	Canola	cytosol	53.33	54.39
CDY57436	Canola	cytosol	52.85	53.9
Bra031830.1-P	Field mustard	cytosol	46.02	51.27
AT3G49970.2	Thale cress	extracellular	42.76	51.07
CDY30615	Canola	cytosol	41.3	50.9
CDY57361	Canola	cytosol	40.98	50.5
Solyc02g064720.2.1	Tomato	cytosol	49.43	50.25
PGSC0003DMT400033866	Potato	cytosol	48.94	50.08
Bra036043.1-P	Field mustard	cytosol	41.79	46.9
EES16593	Sorghum	plastid	37.24	35.56
OQU92601	Sorghum	plastid	35.12	32.68
OQU82741	Sorghum	plastid	29.92	30.56
OQU91026	Sorghum	cytosol, nucleus, plastid	29.27	30.1
EES03716	Sorghum	cytosol	31.71	29.95
EER91175	Sorghum	cytosol	30.73	29.95
EES14497	Sorghum	cytosol	31.54	29.48
EES11510	Sorghum	cytosol	30.41	29.4
OQU93039	Sorghum	cytosol	28.78	29.06
EER93390	Sorghum	cytosol	31.38	28.55
KXG25806	Sorghum	cytosol	30.08	28.29
KXG22914	Sorghum	plastid	31.71	27.31
EES07014	Sorghum	nucleus	34.15	27.17
EER91236	Sorghum	cytosol	27.32	26.54
EES10995	Sorghum	mitochondrion	27.97	26.3
EES05363	Sorghum	cytosol, nucleus, plastid	27.32	26.13
KXG35200	Sorghum	cytosol	24.55	26.12
OQU79444	Sorghum	cytosol	27.15	25.93
EER98911	Sorghum	cytosol	25.85	25.69
EER89339	Sorghum	cytosol	26.5	25.67

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1B6QPR7	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356	EnsemblPlants:KXG39906	ProteinID:KXG39906
ProteinID:KXG39906.1	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF14	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	EnsemblPlantsGene:SORBI_3001G463200	SUPFAM:SSF54695
UniParc:UPI00081AC83D	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:73735996..73739191

Molecular Weight (calculated)

68207.1 Da

IEP (calculated)

6.580

GRAVY (calculated)

-0.339

Length

615 amino acids

Sequence
(BLAST)

001: MEERRLDTPA MRRISDWIMS QEFPSDITIQ VGEATFNLHK LPLASRCDYI RKQVSGINGS RVTHIDLTGM PGGAAAFELV IKFCYGENFE ITEDNVAMLR
101: CAAEHLEMTD DSMGGNLAAR TEAYLEAVAL TSLAGAVTVL RRSEDLLPVS EEVDLVGRCV DAIAYIACND SQFSMPMGSN TNGNAGMDVS SFKAIDDWLA
201: DELTSLRIDT FQRVLIAMKA KGFKGIALAT LIMLYAQKSL RRLDTHGREK EKMDPRQEHE KRVVLETIVS LLPKEKNSLS VSFLSMLLRA ALCLDTTLAC
301: RLDLEKRMAA QLGQAVLDDL LIPSSSPDAG TTFDVDAVQR ILVGYLEHEA EAARLDYNTD DDFISTASPP PNDVGMVGRL LESYLAEIAS DVDLPIDKFT
401: GLAEMIPERA RFNEDGMYRA IDIYLKAHPH LSEAGRKKVC RVMDCQKLSR EACAHAAQND RLPVQTVVQV LYHEQRRLRE APKHAPPPSG VSSFYGGESR
501: APSPPYRPAP TPSLQGRHAR TVLDEVSRLQ RENEELKMEL LRMKMHMREP PAALPQPSGA PPPGRRPPPK KAAGGSGGFM NNVSKKLGRL NPFLRLDAVG
601: TEPPKDRRRR RSIEW

Best Arabidopsis Sequence Match ( AT5G67385.1 )
(BLAST)

001: MSAKKKDLLS SAMKRTSEWI SSQEVSSDVT VHVGEASFSL HKFPLMSKCG FIKKLVSESS KDSDSTVIKI PDIPGGSEAF ELAAKFCYGI NFDMSTENIA
101: MLRCAAEYLE MTEEHSVENL VVRAEAYLNE VALKSLSSSI TVLHKSEKLL PIAERVKLVS RCIDAIAYMT CQESHFCSPS SSNSGNNEVV VQQQSKQPVV
201: DWWAEDLTVL RIDSFQRVLI AMMARGFKQY GLGPVLMLYA QKSLRGLEIF GKGMKKIEPK QEHEKRVILE TIVSLLPREK NAMSVSFLSM LLRAAIFLET
301: TVACRLDLEN RMGLQLGQAV LDDLLIPSYS FTGDHSMFDT DTVQRILMNY LEFEVEGVRL SNNGVDLAGD MERVGKLLEN YMAEIASDRN VSLQKFIGLA
401: ELIPEQSRVT EDGMYRAVDI YLKAHPNMSD VERKKVCSLM DCQKLSREAC AHAAQNDRLP VQTIVQVLYY EQQRLRGEVT NDSDSPAPPP PQPAAVLPPK
501: LSSYTDELSK LKRENQDLKL ELLKMKMKLK EFEKESEKKT SSSTISTNPS SPISTASTGK PPLPRKSFIN SVSKKLGKLN PFSITPYNGR GRTKPPKDRR
601: HSIS

Arabidopsis Description

SR1IP1BTB/POZ domain-containing protein At5g67385 [Source:UniProtKB/Swiss-Prot;Acc:Q66GP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.