Factsheet for HORVU4Hr1G069480.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G255500.1	Wheat	cytosol	96.25	97.52
TraesCS4D01G255500.1	Wheat	cytosol	97.06	97.22
TraesCS4A01G049300.1	Wheat	cytosol	94.94	95.72
Os03t0206700-00	Rice	plasma membrane	78.63	77.0
Zm00001d028056_P001	Maize	cytosol	69.0	70.85
KXG39906	Sorghum	cytosol	70.15	69.92
GSMUA_Achr7P26300_001	Banana	cytosol	58.56	60.64
CDY68489	Canola	cytosol, plastid	43.88	59.91
Solyc02g092560.2.1	Tomato	cytosol, nucleus	56.61	58.22
KRH04469	Soybean	cytosol	55.14	57.98
VIT_07s0129g00380.t01	Wine grape	cytosol	59.05	56.92
KRH58066	Soybean	cytosol	54.65	56.78
CDY37857	Canola	cytosol	55.46	56.67
KRH77099	Soybean	cytosol	57.1	56.63
AT5G67385.1	Thale cress	cytosol	55.46	56.29
KRH28386	Soybean	cytosol	57.59	56.03
Bra012158.1-P	Field mustard	cytosol	54.49	55.57
CDY12841	Canola	cytosol	54.65	55.56
CDY57436	Canola	cytosol	54.49	55.39
CDY30615	Canola	cytosol	42.58	52.3
CDY57361	Canola	cytosol	42.41	52.1
PGSC0003DMT400033866	Potato	cytosol	50.73	51.75
Solyc02g064720.2.1	Tomato	cytosol	51.06	51.74
AT3G49970.2	Thale cress	extracellular	43.39	51.65
Bra031830.1-P	Field mustard	cytosol	46.33	51.45
Bra036043.1-P	Field mustard	cytosol	43.07	48.18
HORVU5Hr1G046340.2	Barley	plastid	35.73	34.6
HORVU1Hr1G055870.1	Barley	plastid	36.05	33.23
HORVU7Hr1G073650.1	Barley	cytosol	32.46	31.05
HORVU5Hr1G093880.1	Barley	cytosol	21.04	31.01
HORVU4Hr1G023260.3	Barley	cytosol, plastid	31.65	30.99
HORVU0Hr1G011770.1	Barley	cytosol	22.84	30.77
HORVU4Hr1G069760.10	Barley	cytosol	29.69	29.74
HORVU3Hr1G076740.1	Barley	cytosol	31.16	29.7
HORVU5Hr1G093850.15	Barley	mitochondrion	31.32	29.27
HORVU5Hr1G093120.2	Barley	cytosol	30.02	29.02
HORVU5Hr1G098170.1	Barley	cytosol, mitochondrion	31.32	28.03
HORVU6Hr1G015480.1	Barley	cytosol	32.95	27.63
HORVU5Hr1G018480.1	Barley	cytosol	28.22	27.46
HORVU7Hr1G030460.8	Barley	cytosol	29.2	27.12
HORVU6Hr1G053490.2	Barley	cytosol	27.24	26.63
HORVU5Hr1G064620.1	Barley	cytosol	26.1	25.12
HORVU7Hr1G097110.6	Barley	cytosol	21.86	24.72
HORVU5Hr1G010370.2	Barley	plastid	29.69	23.07
HORVU0Hr1G012710.2	Barley	cytosol, plastid	21.53	22.68
HORVU1Hr1G034650.1	Barley	plasma membrane, vacuole	23.16	21.88

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EMBL:AK376668	InterPro:BTB/POZ_dom	ncoils:Coil	UniProt:F2EKJ1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU4Hr1G069480	EnsemblPlants:HORVU4Hr1G069480.3	InterPro:IPR000210
InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF14	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI0002008FE7
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EKJ1]

Coordinates

chrchr4H:+:570854663..570857748

Molecular Weight (calculated)

66670.1 Da

IEP (calculated)

7.697

GRAVY (calculated)

-0.343

Length

613 amino acids

Sequence
(BLAST)

001: MQTDTQFSSA AMKRTSDWIR SQEFPSDITI QVGESSFNLH KLPLASKCGY IRKLVSGANG SRVTHLEITG MPGDAKAFDL VIKFCYGVNF EITADNVAML
101: RCAAEHLEMT EECKPGNLVG RTEAYLEEVA LASLEGAVAA LRRAEELLPA SDKVRLITRC IDAIATMTCG DGSHEGLDGV GVPPKAVEDW WADELTALRI
201: DTFQRVMIAM KARGFKGIAM GTMIMLYAQK SLRRLDMNGR DRKKMEPRQE HEKRVVLETI VSLLPREKNT MSVSFLSMLL RAAIYLDTSL ACRLDLETRM
301: AAQLGQAVLD DLLIPSSSPE GAGTAYDVDA VQRILAGYLE NEGEATRLDY NTDDDFASAA SPPNDVGPVG KLMESYLAEV SSDVNLPVDK FTGLAELIPE
401: RARFNEDGMY RAIDIYLKAH PSLGEGERKK VCGVMDCQKL SREACAHAAQ NDRLPVQTVV QVLYHEQRRL RVPPPSQAPS GAPSYAGGES PALSYKPTPS
501: FNGRERSAPS SEVSRLQREN DELRMELMQM KMRLRDPSGA APAAAPPLAA GATRSSPASG KPPLPKKQGG ASGGGGGGGF MKKLGRLNPF VRDPLAGGKV
601: RTKPPKDRRH SIS

Best Arabidopsis Sequence Match ( AT5G67385.1 )
(BLAST)

001: MSAKKKDLLS SAMKRTSEWI SSQEVSSDVT VHVGEASFSL HKFPLMSKCG FIKKLVSESS KDSDSTVIKI PDIPGGSEAF ELAAKFCYGI NFDMSTENIA
101: MLRCAAEYLE MTEEHSVENL VVRAEAYLNE VALKSLSSSI TVLHKSEKLL PIAERVKLVS RCIDAIAYMT CQESHFCSPS SSNSGNNEVV VQQQSKQPVV
201: DWWAEDLTVL RIDSFQRVLI AMMARGFKQY GLGPVLMLYA QKSLRGLEIF GKGMKKIEPK QEHEKRVILE TIVSLLPREK NAMSVSFLSM LLRAAIFLET
301: TVACRLDLEN RMGLQLGQAV LDDLLIPSYS FTGDHSMFDT DTVQRILMNY LEFEVEGVRL SNNGVDLAGD MERVGKLLEN YMAEIASDRN VSLQKFIGLA
401: ELIPEQSRVT EDGMYRAVDI YLKAHPNMSD VERKKVCSLM DCQKLSREAC AHAAQNDRLP VQTIVQVLYY EQQRLRGEVT NDSDSPAPPP PQPAAVLPPK
501: LSSYTDELSK LKRENQDLKL ELLKMKMKLK EFEKESEKKT SSSTISTNPS SPISTASTGK PPLPRKSFIN SVSKKLGKLN PFSITPYNGR GRTKPPKDRR
601: HSIS

Arabidopsis Description

SR1IP1BTB/POZ domain-containing protein At5g67385 [Source:UniProtKB/Swiss-Prot;Acc:Q66GP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.