Factsheet for VIT_07s0129g00380.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77099	Soybean	cytosol	76.1	78.32
Solyc02g092560.2.1	Tomato	cytosol, nucleus	72.17	77.01
KRH28386	Soybean	cytosol	76.26	76.98
KRH58066	Soybean	cytosol	70.28	75.76
CDY68489	Canola	cytosol, plastid	53.46	75.72
KRH04469	Soybean	cytosol	69.18	75.47
Bra012158.1-P	Field mustard	cytosol	68.4	72.38
CDY12841	Canola	cytosol	68.55	72.31
AT5G67385.1	Thale cress	cytosol	68.4	72.02
CDY57436	Canola	cytosol	68.24	71.97
CDY37857	Canola	cytosol	67.77	71.83
GSMUA_Achr7P26300_001	Banana	cytosol	65.72	70.61
PGSC0003DMT400033866	Potato	cytosol	65.09	68.89
Bra031830.1-P	Field mustard	cytosol	59.28	68.3
Solyc02g064720.2.1	Tomato	cytosol	64.94	68.26
CDY30615	Canola	cytosol	52.04	66.33
CDY57361	Canola	cytosol	51.57	65.73
AT3G49970.2	Thale cress	extracellular	51.1	63.11
TraesCS4A01G049300.1	Wheat	cytosol	57.23	59.87
Bra036043.1-P	Field mustard	cytosol	51.57	59.85
TraesCS4B01G255500.1	Wheat	cytosol	56.92	59.83
TraesCS4D01G255500.1	Wheat	cytosol	57.08	59.31
HORVU4Hr1G069480.3	Barley	cytosol	56.92	59.05
Zm00001d028056_P001	Maize	cytosol	54.72	58.29
KXG39906	Sorghum	cytosol	54.56	56.42
Os03t0206700-00	Rice	plasma membrane	55.03	55.91
VIT_08s0056g00610.t01	Wine grape	cytosol	43.24	45.68
VIT_07s0005g06300.t01	Wine grape	cytosol	42.77	44.16
VIT_06s0004g08230.t01	Wine grape	mitochondrion	39.15	43.53
VIT_07s0104g01440.t01	Wine grape	plastid	41.82	42.16
VIT_00s1395g00010.t01	Wine grape	cytosol	28.14	38.33
VIT_00s0665g00050.t01	Wine grape	cytosol	27.83	35.33
VIT_08s0040g01800.t01	Wine grape	cytosol	33.65	34.29
VIT_00s0207g00230.t01	Wine grape	cytosol	33.49	33.54
VIT_10s0003g04490.t01	Wine grape	cytosol	33.18	33.39
VIT_13s0019g04420.t01	Wine grape	cytosol	32.39	33.28
VIT_03s0038g00270.t01	Wine grape	cytosol	34.91	32.94
VIT_07s0129g00250.t01	Wine grape	cytosol	32.23	32.59
VIT_01s0137g00820.t01	Wine grape	cytosol, golgi, nucleus	31.92	32.22
VIT_03s0091g00680.t01	Wine grape	cytosol	30.97	31.57
VIT_04s0008g06630.t01	Wine grape	cytosol	30.66	31.45
VIT_06s0061g01140.t01	Wine grape	cytosol	27.2	29.83
VIT_00s0194g00080.t01	Wine grape	cytosol	26.89	28.84

Protein Annotations

EntrezGene:100244116	wikigene:100244116	Gene3D:3.30.710.10	MapMan:35.1	EMBL:AM432066	InterPro:BTB/POZ_dom
ProteinID:CAN71562	ProteinID:CAN71562.1	ProteinID:CCB57756	ProteinID:CCB57756.1	ncoils:Coil	UniProt:F6HSU6
EMBL:FN596246	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356
EntrezGene:LOC100244116	wikigene:LOC100244116	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097
PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF14	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI0002108E85
ArrayExpress:VIT_07s0129g00380	EnsemblPlantsGene:VIT_07s0129g00380	EnsemblPlants:VIT_07s0129g00380.t01	RefSeq:XP_002284242	RefSeq:XP_002284242.2	SEG:seg

Description

No Description!

Coordinates

chr7:-:15634457..15637876

Molecular Weight (calculated)

70964.1 Da

IEP (calculated)

6.894

GRAVY (calculated)

-0.162

Length

636 amino acids

Sequence
(BLAST)

001: MVDLQQEGIA PTTVNMSSKK KELLSTAMKR TSEWIFSQEI PSDVTVHAGE VSFSLHKFPL VSKCGYIRKL VSESSDADLS VIEVHDVPGG AEAFELAAKF
101: CYGINFEIST ENIAMLRCVA EYLEMTEDYS VGNLVGRAEA YLNEVALKSL AGAVTILHLS EALLPMAEKV KVVSRCIDAI AYIACKESQF SMSGRVESGT
201: DLLNSSLVSH PKHIVDWWAE DLIVLRIDIF QRVLIAMMAR GFKQYALGPI LMLYAQKSLR GLEVFGKGRK KIEPKQEHEK RVILETIVSL LPREKNAMSV
301: SFLSMLLRAA IYLETTVACR LDLEKRMGLQ LGQAVLDDLL IPSFSFTGDL LFDVDTVQRI MMNYLECETN GNPFSYKADE EYVSPPPSDL ERVGKLMESY
401: LAEIASDRNL NVSKFISLAE LLPEQSRVKE DGMYRAIDIY LKAHPSLSDM EKKKVCSLMD CQKLSREACA HAAQNDRLPV QTVVQVLYYE QQRLRDVMNG
501: SLMGGESPAI PPKSNLFSND LHPVSDELLS LRRENEDLKL ELMKMKMRLK EIEKSAVPSG VPTSLPSAYS SILQSAASSP RNTPPSADKP PLPRKSFMNS
601: VSKRLGRLYP FVRADGVAPD GKARTKPSRD RRHSIS

Best Arabidopsis Sequence Match ( AT5G67385.1 )
(BLAST)

001: MSAKKKDLLS SAMKRTSEWI SSQEVSSDVT VHVGEASFSL HKFPLMSKCG FIKKLVSESS KDSDSTVIKI PDIPGGSEAF ELAAKFCYGI NFDMSTENIA
101: MLRCAAEYLE MTEEHSVENL VVRAEAYLNE VALKSLSSSI TVLHKSEKLL PIAERVKLVS RCIDAIAYMT CQESHFCSPS SSNSGNNEVV VQQQSKQPVV
201: DWWAEDLTVL RIDSFQRVLI AMMARGFKQY GLGPVLMLYA QKSLRGLEIF GKGMKKIEPK QEHEKRVILE TIVSLLPREK NAMSVSFLSM LLRAAIFLET
301: TVACRLDLEN RMGLQLGQAV LDDLLIPSYS FTGDHSMFDT DTVQRILMNY LEFEVEGVRL SNNGVDLAGD MERVGKLLEN YMAEIASDRN VSLQKFIGLA
401: ELIPEQSRVT EDGMYRAVDI YLKAHPNMSD VERKKVCSLM DCQKLSREAC AHAAQNDRLP VQTIVQVLYY EQQRLRGEVT NDSDSPAPPP PQPAAVLPPK
501: LSSYTDELSK LKRENQDLKL ELLKMKMKLK EFEKESEKKT SSSTISTNPS SPISTASTGK PPLPRKSFIN SVSKKLGKLN PFSITPYNGR GRTKPPKDRR
601: HSIS

Arabidopsis Description

SR1IP1BTB/POZ domain-containing protein At5g67385 [Source:UniProtKB/Swiss-Prot;Acc:Q66GP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.