Factsheet for AT5G67385.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68489	Canola	cytosol, plastid	68.87	92.65
CDY37857	Canola	cytosol	91.06	91.67
Bra012158.1-P	Field mustard	cytosol	90.56	91.02
CDY57436	Canola	cytosol	90.73	90.88
CDY12841	Canola	cytosol	90.56	90.71
Bra031830.1-P	Field mustard	cytosol	77.98	85.33
AT3G49970.2	Thale cress	extracellular	60.26	70.68
VIT_07s0129g00380.t01	Wine grape	cytosol	72.02	68.4
Solyc02g092560.2.1	Tomato	cytosol, nucleus	67.38	68.29
KRH04469	Soybean	cytosol	65.73	68.1
KRH77099	Soybean	cytosol	69.21	67.64
KRH58066	Soybean	cytosol	65.89	67.46
KRH28386	Soybean	cytosol	69.37	66.51
GSMUA_Achr7P26300_001	Banana	cytosol	64.4	65.71
PGSC0003DMT400033866	Potato	cytosol	62.09	62.4
Solyc02g064720.2.1	Tomato	cytosol	62.09	61.98
TraesCS4B01G255500.1	Wheat	cytosol	56.62	56.53
TraesCS4A01G049300.1	Wheat	cytosol	56.62	56.25
TraesCS4D01G255500.1	Wheat	cytosol	56.79	56.05
Zm00001d028056_P001	Maize	cytosol	54.97	55.61
HORVU4Hr1G069480.3	Barley	cytosol	56.29	55.46
KXG39906	Sorghum	cytosol	54.8	53.82
Os03t0206700-00	Rice	plasma membrane	54.8	52.88
AT5G48800.1	Thale cress	cytosol	41.56	40.88
AT2G30520.1	Thale cress	cytosol	39.57	40.3
AT1G03010.1	Thale cress	cytosol	41.72	39.75
AT3G08570.1	Thale cress	plastid	38.74	37.93
AT2G47860.3	Thale cress	plastid	40.07	36.78
AT3G08660.1	Thale cress	plastid	35.26	36.6
AT2G23050.1	Thale cress	cytosol	27.81	34.93
AT3G50840.1	Thale cress	cytosol	31.46	33.39
AT5G13600.1	Thale cress	cytosol	32.12	32.83
AT4G37590.1	Thale cress	cytosol	30.79	32.07
AT5G03250.1	Thale cress	cytosol	31.13	31.76
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	34.93	31.73
AT5G67440.1	Thale cress	cytosol	30.3	31.61
AT1G67900.2	Thale cress	nucleus	32.28	30.9
AT5G66560.1	Thale cress	cytosol	33.94	30.69
AT4G31820.1	Thale cress	cytosol	28.81	30.47
AT2G14820.2	Thale cress	cytosol	31.46	29.97
AT5G64330.1	Thale cress	cytosol	36.59	29.62
AT5G10250.2	Thale cress	cytosol	29.97	29.1
AT3G26490.3	Thale cress	cytosol	26.82	27.55
AT3G44820.1	Thale cress	cytosol	29.64	27.5
AT5G47800.2	Thale cress	cytosol	23.51	21.13

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:836874	UniProt:A0A178URN3	EMBL:AB007645	ProteinID:AED98336.1
ProteinID:ANM69973.1	ProteinID:ANM69974.1	ProteinID:ANM69975.1	ProteinID:ANM69976.1	ArrayExpress:AT5G67385	EnsemblPlantsGene:AT5G67385
RefSeq:AT5G67385	TAIR:AT5G67385	RefSeq:AT5G67385-TAIR-G	EnsemblPlants:AT5G67385.1	TAIR:AT5G67385.1	EMBL:BT015362
EMBL:BT015895	InterPro:BTB/POZ_dom	EMBL:BX829802	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006464	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0008152
GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016567	GO:GO:0019538	GO:GO:0042742
InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	RefSeq:NP_001331617.1	RefSeq:NP_001331618.1	RefSeq:NP_001331619.1
RefSeq:NP_001331620.1	RefSeq:NP_680473.2	ProteinID:OAO96139.1	ProteinID:OAO96140.1	PFAM:PF03000	PO:PO:0000293
PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF14	UniProt:Q66GP0	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI00005DC2DF	SEG:seg	:	:

Description

SR1IP1BTB/POZ domain-containing protein At5g67385 [Source:UniProtKB/Swiss-Prot;Acc:Q66GP0]

Coordinates

chr5:+:26884203..26887430

Molecular Weight (calculated)

67562.6 Da

IEP (calculated)

8.087

GRAVY (calculated)

-0.308

Length

604 amino acids

Sequence
(BLAST)

001: MSAKKKDLLS SAMKRTSEWI SSQEVSSDVT VHVGEASFSL HKFPLMSKCG FIKKLVSESS KDSDSTVIKI PDIPGGSEAF ELAAKFCYGI NFDMSTENIA
101: MLRCAAEYLE MTEEHSVENL VVRAEAYLNE VALKSLSSSI TVLHKSEKLL PIAERVKLVS RCIDAIAYMT CQESHFCSPS SSNSGNNEVV VQQQSKQPVV
201: DWWAEDLTVL RIDSFQRVLI AMMARGFKQY GLGPVLMLYA QKSLRGLEIF GKGMKKIEPK QEHEKRVILE TIVSLLPREK NAMSVSFLSM LLRAAIFLET
301: TVACRLDLEN RMGLQLGQAV LDDLLIPSYS FTGDHSMFDT DTVQRILMNY LEFEVEGVRL SNNGVDLAGD MERVGKLLEN YMAEIASDRN VSLQKFIGLA
401: ELIPEQSRVT EDGMYRAVDI YLKAHPNMSD VERKKVCSLM DCQKLSREAC AHAAQNDRLP VQTIVQVLYY EQQRLRGEVT NDSDSPAPPP PQPAAVLPPK
501: LSSYTDELSK LKRENQDLKL ELLKMKMKLK EFEKESEKKT SSSTISTNPS SPISTASTGK PPLPRKSFIN SVSKKLGKLN PFSITPYNGR GRTKPPKDRR
601: HSIS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.