Factsheet for TraesCS4B01G255500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G255500.1	Wheat	cytosol	98.68	97.55
HORVU4Hr1G069480.3	Barley	cytosol	97.52	96.25
TraesCS4A01G049300.1	Wheat	cytosol	96.69	96.22
Os03t0206700-00	Rice	plasma membrane	78.51	75.88
Zm00001d028056_P001	Maize	cytosol	70.58	71.52
KXG39906	Sorghum	cytosol	71.41	70.24
GSMUA_Achr7P26300_001	Banana	cytosol	59.83	61.15
CDY68489	Canola	cytosol, plastid	44.79	60.36
Solyc02g092560.2.1	Tomato	cytosol, nucleus	57.85	58.72
KRH04469	Soybean	cytosol	55.37	57.46
CDY37857	Canola	cytosol	56.69	57.17
VIT_07s0129g00380.t01	Wine grape	cytosol	59.83	56.92
KRH77099	Soybean	cytosol	58.02	56.8
AT5G67385.1	Thale cress	cytosol	56.53	56.62
KRH58066	Soybean	cytosol	55.04	56.44
KRH28386	Soybean	cytosol	58.35	56.03
Bra012158.1-P	Field mustard	cytosol	55.54	55.91
CDY12841	Canola	cytosol	55.7	55.89
CDY57436	Canola	cytosol	55.54	55.72
CDY30615	Canola	cytosol	42.98	52.1
CDY57361	Canola	cytosol	42.81	51.9
AT3G49970.2	Thale cress	extracellular	44.13	51.84
Bra031830.1-P	Field mustard	cytosol	47.27	51.81
Solyc02g064720.2.1	Tomato	cytosol	51.57	51.57
PGSC0003DMT400033866	Potato	cytosol	51.07	51.41
Bra036043.1-P	Field mustard	cytosol	43.31	47.81
TraesCS5B01G145100.1	Wheat	plastid	36.86	35.4
TraesCS4B01G122300.1	Wheat	cytosol, plastid	32.07	33.98
TraesCS5B01G461900.4	Wheat	plastid	36.53	33.64
TraesCS7B01G209700.1	Wheat	cytosol	32.56	30.64
TraesCS4B01G256600.1	Wheat	cytosol	30.41	30.41
TraesCS3B01G349200.1	Wheat	cytosol	31.41	29.37
TraesCS5B01G046200.2	Wheat	mitochondrion	30.74	28.97
TraesCS5B01G383100.1	Wheat	plastid	31.24	28.9
TraesCS5B01G076500.1	Wheat	cytosol	29.26	28.5
TraesCS4B01G078900.3	Wheat	cytosol	29.75	28.39
TraesCS2B01G557300.2	Wheat	cytosol	30.25	28.28
TraesCS5B01G408200.1	Wheat	cytosol	31.24	28.04
TraesCS5B01G377600.1	Wheat	cytosol	31.07	27.73
TraesCS6B01G117400.1	Wheat	cytosol	33.72	27.64
TraesCS1B01G298700.1	Wheat	cytosol, plastid	18.84	27.54
TraesCS7B01G052800.1	Wheat	cytosol	29.09	26.95
TraesCS6B01G237800.1	Wheat	cytosol	27.11	26.2
TraesCS5B01G222700.2	Wheat	cytosol	26.78	25.43
TraesCS5B01G168600.3	Wheat	cytosol	24.46	24.67

Protein Annotations

EnsemblPlants:TraesCS4B01G255500.1	EnsemblPlantsGene:TraesCS4B01G255500	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR32370	PANTHER:PTHR32370:SF14	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
SEG:seg	SMART:SM00225	SUPFAM:SSF54695	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr4B:+:520396486..520398962

Molecular Weight (calculated)

65943.2 Da

IEP (calculated)

6.979

GRAVY (calculated)

-0.357

Length

605 amino acids

Sequence
(BLAST)

001: MQTDTQFSSA AMKRTSDWIR SQEFPSDITI QVGESSFNLH KLPLASKCGY IRKLVSGANG SRVTHLEITG MPGDAKAFDL VIKFCYGVNF EITADNVAML
101: RCAAEHLEMT EECKPGNLIG RTEAYLEEVA LASLEGAVTA LRRAEELLPA SDKVQLIGRC IDAIATMTCG DGSHEGLDDV GAPPKPVDDW WADELTALRI
201: DTFQRVMIAM KARGFKGIAM GTMIMLYAQK SLRRLDMNGR ERKKMEPRQE HEKRVVLETI VSLLPREKNT MSVSFLSMLL RAAIYLDTSL ACRLDLETRM
301: AAQLGQAVLD DLLIPSSSPE GAGTAYDVDA VQRILAGYLE NEGEATRLDY NTDDDFASAA SPPNDVGPVG KLMESYLAEI SSDVNLPVDK FTGLAELIPE
401: RARFNEDGMY RAIDIYLKAH PSLGEGERKK VCGVMDCQKL SREACAHAAQ NDRLPVQTVV QVLYHEQRRL RVPPPSQAPS GAPSYAGGES PAVSYGRERS
501: APSSEVSRLQ RENDELRMEL MQMKMRLRDP SGAAPAPAPP LAAGATRSFP SSGKPPLPKK QGGSGGGGGG GFMKKLGRLN PFVRDPLGGG KVRTKPPKDR
601: RHSIS

Best Arabidopsis Sequence Match ( AT5G67385.1 )
(BLAST)

001: MSAKKKDLLS SAMKRTSEWI SSQEVSSDVT VHVGEASFSL HKFPLMSKCG FIKKLVSESS KDSDSTVIKI PDIPGGSEAF ELAAKFCYGI NFDMSTENIA
101: MLRCAAEYLE MTEEHSVENL VVRAEAYLNE VALKSLSSSI TVLHKSEKLL PIAERVKLVS RCIDAIAYMT CQESHFCSPS SSNSGNNEVV VQQQSKQPVV
201: DWWAEDLTVL RIDSFQRVLI AMMARGFKQY GLGPVLMLYA QKSLRGLEIF GKGMKKIEPK QEHEKRVILE TIVSLLPREK NAMSVSFLSM LLRAAIFLET
301: TVACRLDLEN RMGLQLGQAV LDDLLIPSYS FTGDHSMFDT DTVQRILMNY LEFEVEGVRL SNNGVDLAGD MERVGKLLEN YMAEIASDRN VSLQKFIGLA
401: ELIPEQSRVT EDGMYRAVDI YLKAHPNMSD VERKKVCSLM DCQKLSREAC AHAAQNDRLP VQTIVQVLYY EQQRLRGEVT NDSDSPAPPP PQPAAVLPPK
501: LSSYTDELSK LKRENQDLKL ELLKMKMKLK EFEKESEKKT SSSTISTNPS SPISTASTGK PPLPRKSFIN SVSKKLGKLN PFSITPYNGR GRTKPPKDRR
601: HSIS

Arabidopsis Description

SR1IP1BTB/POZ domain-containing protein At5g67385 [Source:UniProtKB/Swiss-Prot;Acc:Q66GP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.