Factsheet for HORVU3Hr1G076740.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G349200.1	Wheat	cytosol	94.25	93.66
TraesCS3A01G317300.1	Wheat	cytosol	93.93	93.07
TraesCS3D01G314000.1	Wheat	cytosol	93.47	92.18
Os01t0780600-01	Rice	plasma membrane	83.36	81.34
Zm00001d043271_P001	Maize	cytosol	81.8	81.3
EES03716	Sorghum	cytosol	81.49	80.49
GSMUA_AchrUn_...	Banana	cytosol	38.57	58.35
Solyc09g007820.1.1	Tomato	cytosol	51.17	55.11
VIT_13s0019g04420.t01	Wine grape	cytosol	53.03	55.09
CDY10395	Canola	cytosol	46.35	54.88
VIT_08s0040g01800.t01	Wine grape	cytosol	53.19	54.81
KRH32482	Soybean	cytosol	50.08	54.67
PGSC0003DMT400093531	Potato	cytosol	45.57	54.46
KRH19874	Soybean	cytosol	49.77	54.33
KRH21111	Soybean	cytosol	51.48	54.17
CDX70320	Canola	cytosol	47.9	53.85
AT5G03250.1	Thale cress	cytosol	49.46	53.72
CDX80858	Canola	cytosol	48.68	53.23
Bra005737.1-P	Field mustard	cytosol	48.68	53.23
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	50.39	53.11
CDY11245	Canola	cytosol	48.68	52.34
HORVU5Hr1G093120.2	Barley	cytosol	50.23	50.95
AT5G13600.1	Thale cress	cytosol	46.5	50.59
CDY72506	Canola	cytosol	9.95	50.39
KRH34860	Soybean	cytosol	48.37	50.32
KRG91918	Soybean	cytosol	47.74	49.76
CDX85639	Canola	cytosol	44.17	49.65
HORVU7Hr1G073650.1	Barley	cytosol	47.74	47.89
Bra008815.1-P	Field mustard	cytosol	44.95	47.61
CDY09812	Canola	cytosol	44.79	47.37
CDX69627	Canola	cytosol	44.48	47.12
Bra023423.1-P	Field mustard	cytosol	36.55	42.57
HORVU5Hr1G010370.2	Barley	plastid	47.59	38.78
HORVU5Hr1G093880.1	Barley	cytosol	23.17	35.82
HORVU5Hr1G098170.1	Barley	cytosol, mitochondrion	37.33	35.04
HORVU5Hr1G093850.15	Barley	mitochondrion	35.3	34.6
HORVU4Hr1G069760.10	Barley	cytosol	31.57	33.17
HORVU5Hr1G046340.2	Barley	plastid	32.5	33.02
HORVU5Hr1G018480.1	Barley	cytosol	32.19	32.86
HORVU1Hr1G055870.1	Barley	plastid	33.44	32.33
HORVU4Hr1G069480.3	Barley	cytosol	29.7	31.16
HORVU6Hr1G053490.2	Barley	cytosol	30.33	31.1
HORVU5Hr1G064620.1	Barley	cytosol	30.64	30.93
HORVU6Hr1G015480.1	Barley	cytosol	35.15	30.92
HORVU0Hr1G011770.1	Barley	cytosol	21.15	29.89
HORVU7Hr1G030460.8	Barley	cytosol	30.02	29.24
HORVU7Hr1G097110.6	Barley	cytosol	21.31	25.28
HORVU4Hr1G023260.3	Barley	cytosol, plastid	24.11	24.76
HORVU0Hr1G012710.2	Barley	cytosol, plastid	22.08	24.4
HORVU1Hr1G034650.1	Barley	plasma membrane, vacuole	23.64	23.42

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:HORVU3Hr1G076740	EnsemblPlants:HORVU3Hr1G076740.1	InterPro:IPR000210	InterPro:IPR027356	UniProt:M0YW46
InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370
PANTHER:PTHR32370:SF41	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI0002950816	SEG:seg

Description

No Description!

Coordinates

chrchr3H:+:569992909..569995187

Molecular Weight (calculated)

69580.7 Da

IEP (calculated)

5.220

GRAVY (calculated)

0.003

Length

643 amino acids

Sequence
(BLAST)

001: MVIMKLGSKP DIFVLEGLTW RCMTELESDV VVEVGDVSFY LHKFPLLSRS GVLQRLISEY HPASDGGMCT LQLDDIPGGA KAFELAARFC YDVKIELNAL
101: NVVCLRCAAE YLGMTDEYAE GNLIAQAESF LADVLANWKD CVRALETCEG VLPTAEDLHI VPRCITALAS KACASDAAAW STHGAKNAAS LDRDALWNGI
201: GSGDTPRAAA SAMDWWYEDV SLLSLPMFKR LIQAMEAKSM RAESIAGAIM FYAGRLLPGL KRSASFSNAS FADYVGGAGS RSATPRSATA SLSGTSEGDQ
301: RYFLEEIVAL VPTKKGVTST KFLLGLLRTA MLLHASPLCR ENLERRIGAQ LEDASLDDLL VPNLGYTVET LYDIDCVQRI LDYFMSSMDG LGTGYTSPAL
401: AEEGSQLGLP QAATPPAVAP IAMVAKLMDG YLAEVAPDTN LKLPKFQALA AVVPDYARTV DDGIYRAMDI YLKSHPWLSE SEREQLCRLM NCQKLSLEAC
501: THAAQNERLP LRVVVQVLFF EQLRLRTSIA GWFFVSDNAA ATDGAHPHHP SNAGAIVPKG SAVVDSGMAG QDDAVAMTCT PEGKGGEAIT DVRARVSELE
601: KECVTMKQEI RRLGKPRRSW SILTRKCGFG AKVQQAQPAM SGK

Best Arabidopsis Sequence Match ( AT5G03250.1 )
(BLAST)

001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES STDDGSGCVL SLDEIPGGGK TFELVTKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEEV IDYAEDLHII SRCVDSLAVK ACADPSLFNW PVGGGKNATS GQNTEDESHL
201: WNGISASGKM LQHTGEDWWF DDASFLSLPL FKRLITAIEA RGMKLENIAM AVMYYTRKHV PLMNRQVNMD EQVIETPNPS EEDQKTCLEE IVGLLPSKKG
301: VNPTKFLLRL LQTAMVLHAS QSSRENLERR IGNQLDQAAL VDLLIPNMGY SETLYDVECV LRMIEQFVSS TEQAGIVPSP CIIEEGHLVK DGADLLTPTT
401: LVATLVDGYL AEVAPDVNLK LAKFEAIAAA IPDYARPLDD GVYHAIDVYL KAHPWITDSE REHICRLMNC QKLSLEASTH AAQNERLPLR VIVQVLFFEQ
501: LRLRTSVSGW FFVSENLDNP DNQHGANGGL LKPRGENVRE RVSELEKECM NMKQELHKLV RTKRSWKNFT RKLNFKKKSE CCKPKDQATP AI

Arabidopsis Description

BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.