Factsheet for Os01t0780600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043271_P001	Maize	cytosol	84.52	86.09
EES03716	Sorghum	cytosol	83.76	84.79
TraesCS3B01G349200.1	Wheat	cytosol	81.94	83.46
HORVU3Hr1G076740.1	Barley	cytosol	81.34	83.36
TraesCS3A01G317300.1	Wheat	cytosol	81.64	82.9
TraesCS3D01G314000.1	Wheat	cytosol	81.79	82.67
GSMUA_AchrUn_...	Banana	cytosol	38.39	59.53
VIT_13s0019g04420.t01	Wine grape	cytosol	52.66	56.06
CDY10395	Canola	cytosol	46.13	55.99
Solyc09g007820.1.1	Tomato	cytosol	50.68	55.95
VIT_08s0040g01800.t01	Wine grape	cytosol	52.96	55.93
AT5G03250.1	Thale cress	cytosol	49.92	55.57
CDX70320	Canola	cytosol	48.1	55.42
PGSC0003DMT400093531	Potato	cytosol	44.76	54.83
CDX80858	Canola	cytosol	48.86	54.76
KRH21111	Soybean	cytosol	50.68	54.66
Bra005737.1-P	Field mustard	cytosol	48.71	54.59
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	50.23	54.26
KRH32482	Soybean	cytosol	48.41	54.16
KRH19874	Soybean	cytosol	48.25	53.99
CDY11245	Canola	cytosol	48.71	53.68
Os04t0636500-01	Rice	plasma membrane	50.99	52.17
AT5G13600.1	Thale cress	cytosol	46.28	51.61
CDY72506	Canola	cytosol	9.86	51.18
CDX85639	Canola	cytosol	44.31	51.05
KRH34860	Soybean	cytosol	47.8	50.97
KRG91918	Soybean	cytosol	47.19	50.41
Os08t0130600-01	Rice	plasma membrane	48.56	49.92
Bra008815.1-P	Field mustard	cytosol	45.07	48.93
CDY09812	Canola	cytosol	44.92	48.68
CDX69627	Canola	cytosol	44.76	48.6
Os12t0613250-00	Rice	plasma membrane	47.8	48.46
Bra023423.1-P	Field mustard	cytosol	37.18	44.38
Os03t0767600-01	Rice	cytosol	37.03	35.72
Os03t0205700-01	Rice	cytosol	32.63	35.54
Os03t0609800-02	Rice	cytosol	33.38	34.7
Os03t0738900-00	Rice	nucleus, plasma membrane, plastid	33.99	34.15
Os12t0583500-01	Rice	cytosol, plasma membrane	32.63	33.7
Os11t0118500-00	Rice	plastid	32.32	33.13
Os12t0117600-01	Rice	plastid	32.47	32.87
Os09t0420900-01	Rice	cytosol	30.35	32.36
Os06t0184500-00	Rice	cytosol	30.65	31.37
Os03t0347700-01	Rice	mitochondrion, plastid	31.87	31.3
Os03t0206700-00	Rice	plasma membrane	29.44	30.99
Os04t0477000-01	Rice	cytosol, mitochondrion, plastid	28.83	30.3
Os02t0568200-00	Rice	cytosol	33.84	29.27
Os09t0266600-01	Rice	cytosol	16.84	26.68
Os12t0117400-01	Rice	plasma membrane	22.91	26.49
Os11t0118300-01	Rice	cytosol, mitochondrion, nucleus	22.76	24.31
Os02t0594700-01	Rice	cytosol, mitochondrion	6.53	22.63
Os12t0613300-02	Rice	nucleus	0.91	2.02

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:4327837	ProteinID:BAD52854.1	ProteinID:BAS74640.1	InterPro:BTB/POZ_dom
ncoils:Coil	ProteinID:EEE55492.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR027356	InterPro:NPH3_dom	EnsemblPlantsGene:Os01g0780600	EnsemblPlants:Os01t0780600-01	PFAM:PF00651	PFAM:PF03000
PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF41	UniProt:Q5ZCG0	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI0000446B98	RefSeq:XP_015622296.1	SEG:seg	:

Description

Similar to Transposon protein Mutator sub-class. (Os01t0780600-01)

Coordinates

chr1:-:33064726..33067834

Molecular Weight (calculated)

70619.7 Da

IEP (calculated)

5.335

GRAVY (calculated)

-0.061

Length

659 amino acids

Sequence
(BLAST)

001: MATMKLGSKP EIFVLEGLTW RCMTELESDV VVEVGEMSFY LHKFPLLSRS GVLQRMISEY QAPQEDGGGG GGMCTLQLDD IPGGAKAFEL AARFCYDVKI
101: ELNAHNVVCL RCAAEYLRMT DDYAEGNLIT QAESFLADVL ANWKDSIKAL ETCEGVLPTA EDLHIVSRCI TALASKACAS DAAACSTGHA AASASAVAVA
201: AKNASYDALW NGIGSGGTPR GGGGAAGAAA GCSGMDWWYE DVSFLSLPMF KRLIQAMEGK GMRPESIAGA IMFYAGRFLP GLKRNTSFSN ASFGGDCGAG
301: SRSITPRAAN VSAPSEGDQR YFLEEIVALL PAKKGVASTR FLLGMLRTAM LLHASPLCRE NLERRIGAQL EDACLDDLLV PNLGYTVETL YDIDCVQRIL
401: DYFMSSTDGL GTGYTSPAVV EEGSQLGALH AGSPSSLSPI TMVAKLMDGY LAEVAPDTNL KLPKFQALAA VVPDYARPVD DGIYRAMDIY LKSHPWLSES
501: EREQLCRLMN CQKLSLEACT HAAQNERLPL RVVVQVLFFE QLRLRTSIAG WFFVSGNAAA GGDGAPQPHP GGSAIVPKGA AAAGQSDADA EADEGKGKEL
601: PAEAITDVKA RVSELEKECM SMKQEIRRLG KPRRSWSLLT RKCRFGTKVQ QAQPTMSSK

Best Arabidopsis Sequence Match ( AT5G03250.1 )
(BLAST)

001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES STDDGSGCVL SLDEIPGGGK TFELVTKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEEV IDYAEDLHII SRCVDSLAVK ACADPSLFNW PVGGGKNATS GQNTEDESHL
201: WNGISASGKM LQHTGEDWWF DDASFLSLPL FKRLITAIEA RGMKLENIAM AVMYYTRKHV PLMNRQVNMD EQVIETPNPS EEDQKTCLEE IVGLLPSKKG
301: VNPTKFLLRL LQTAMVLHAS QSSRENLERR IGNQLDQAAL VDLLIPNMGY SETLYDVECV LRMIEQFVSS TEQAGIVPSP CIIEEGHLVK DGADLLTPTT
401: LVATLVDGYL AEVAPDVNLK LAKFEAIAAA IPDYARPLDD GVYHAIDVYL KAHPWITDSE REHICRLMNC QKLSLEASTH AAQNERLPLR VIVQVLFFEQ
501: LRLRTSVSGW FFVSENLDNP DNQHGANGGL LKPRGENVRE RVSELEKECM NMKQELHKLV RTKRSWKNFT RKLNFKKKSE CCKPKDQATP AI

Arabidopsis Description

BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.