Factsheet for Os04t0477000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
plasma membrane 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003297_P001	Maize	mitochondrion	70.33	71.59
EES10995	Sorghum	mitochondrion	68.26	65.44
Os02t0594700-01	Rice	cytosol, mitochondrion	16.27	53.68
CDY72257	Canola	cytosol	40.99	50.79
CDY72267	Canola	cytosol	40.99	50.79
GSMUA_Achr10P...	Banana	cytosol	45.45	50.62
GSMUA_Achr8P16390_001	Banana	cytosol	39.71	47.7
VIT_01s0137g00820.t01	Wine grape	cytosol, golgi, nucleus	47.53	47.3
KRH74516	Soybean	cytosol	45.93	46.83
KRG99441	Soybean	cytosol	46.89	46.52
KRH69640	Soybean	cytosol	47.05	46.38
KRH45579	Soybean	nucleus	46.73	46.21
AT1G67900.2	Thale cress	nucleus	46.25	45.96
Solyc05g013570.2.1	Tomato	nucleus	44.5	45.74
PGSC0003DMT400047866	Potato	cytosol	45.77	45.7
Bra004064.1-P	Field mustard	cytosol	45.3	45.15
CDX83620	Canola	cytosol	34.77	39.85
CDY13635	Canola	cytosol	36.36	39.72
Bra025208.1-P	Field mustard	cytosol	36.36	39.72
AT3G26490.3	Thale cress	cytosol	36.2	38.61
Os09t0420900-01	Rice	cytosol	35.09	35.6
Os03t0205700-01	Rice	cytosol	33.33	34.55
Os03t0609800-02	Rice	cytosol	34.93	34.54
Os12t0583500-01	Rice	cytosol, plasma membrane	34.77	34.17
Os06t0184500-00	Rice	cytosol	33.17	32.3
Os04t0636500-01	Rice	plasma membrane	32.7	31.83
Os08t0130600-01	Rice	plasma membrane	31.74	31.05
Os09t0266600-01	Rice	cytosol	20.41	30.77
Os01t0780600-01	Rice	plasma membrane	30.3	28.83
Os11t0118500-00	Rice	plastid	29.03	28.3
Os03t0206700-00	Rice	plasma membrane	28.23	28.27
Os12t0117600-01	Rice	plastid	29.35	28.26
Os03t0738900-00	Rice	nucleus, plasma membrane, plastid	29.19	27.9
Os12t0613250-00	Rice	plasma membrane	28.23	27.23
Os03t0767600-01	Rice	cytosol	28.87	26.5
Os02t0568200-00	Rice	cytosol	31.58	25.98
Os12t0117400-01	Rice	plasma membrane	23.6	25.96
Os03t0347700-01	Rice	mitochondrion, plastid	27.59	25.78
Os11t0118300-01	Rice	cytosol, mitochondrion, nucleus	23.92	24.31
Os12t0613300-02	Rice	nucleus	0.64	1.35

Protein Annotations

EMBL:AK067981	EnsemblPlants:Os04t0477000-01	EnsemblPlantsGene:Os04g0477000	EntrezGene:4336159	Gene3D:3.30.710.10	InterPro:IPR027356
InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR32370	PANTHER:PTHR32370:SF9	PFAM:PF03000	PFscan:PS51649
ProteinID:BAF14998.1	ProteinID:BAS89700.1	ProteinID:CAE05861.1	RefSeq:XP_015634991.1	SEG:seg	SUPFAM:SSF54695
UniParc:UPI00001B1CBE	UniProt:Q7XK42	MapMan:35.1	:	:	:

Description

BTB/POZ fold domain containing protein. (Os04t0477000-01)

Coordinates

chr4:+:23876327..23878830

Molecular Weight (calculated)

66339.6 Da

IEP (calculated)

9.573

GRAVY (calculated)

-0.082

Length

627 amino acids

Sequence
(BLAST)

001: MRVMKLGNRP DTFFSSGPVR SVSTDLATDM QILVDGCLFR LHKFPLLSKC MWLQALCVES GDGGGAVELP AFPGGAEAFE ACAKFCYGVA VTIGPHNVVA
101: VRCAAARLGM SEAADRGNLA AKLDAFLSSC LLRRWKDALA VLHSTRRYAA LCEELGVTSR CVDAVAALAV GDASGAVPAG SSSSSPPWWA RDISELGVDL
201: YWRVMVAVKA TGTVHAKAIG DTLKAYARRW LPIAAKNHHA AERTAGGGGG GAANAERATK NHRLLVEKIV SLLPAERNAV SCGFLLKLLK AANILGASPA
301: SKAELTRRVA SQLEDANVSD LLIPAPPPCA GGVLYDVDAV VTILEEFALR QAAASGSPKG SPARAGRHRR SMSAESGELE GARRSTSMAA VSHGAMVRVG
401: RLVDGFLAMV ATKDARTPLD KMIAVAEAVP DFARPEHDDL YRAIDTYLRA HPEMDKSSRK KLCRVLNCRK LSEKASMHAA QNELLPLRVV VQVLFFENAR
501: AAGLSSGHGN RVAARFPGDG GDVSALLGTG RPRTTEENGK DGQSPAAAGS VAADGDWSVE GLRRAASRVA TLKMRLEEED GEDAGDEAFV HRTRAGLARS
601: ASSRVTAAAG RSKRMLSRLW PTSRTFT

Best Arabidopsis Sequence Match ( AT1G67900.4 )
(BLAST)

001: MKFMKLGSRP DTFYTSEDLR CVSSEVSSDF TIEVSGSRYL LHKFPLLSKC LRLQRMCSES PESIIQLPEF PGGVEAFELC AKFCYGITIT ISAYNIVAAR
101: CAAEYLQMSE EVEKGNLVYK LEVFFNSCIL NGWRDSIVTL QTTKAFPLWS EDLAITSRCI EAIASKVLSH PSKVSLSHSH SRRVRDDDMS SNRAAASSRG
201: WWAEDIAELG IDLYWRTMIA IKSGGKVPAS LIGDALRVYA SKWLPTLQRN RKVVKKKEDS DSDSDTDTSS KHRLLLESII SLLPAEKGAV SCSFLLKLLK
301: AANILNASTS SKMELARRVA LQLEEATVSD LLIPPMSYKS ELLYDVDIVA TILEQFMVQG QTSPPTSPLR GKKGMMDRRR RSRSAENIDL EFQESRRSSS
401: ASHSSKLKVA KLVDGYLQQI ARDVNLPLSK FVTLAESVPE FSRLDHDDLY RAIDIYLKAH KNLNKSERKR VCRVLDCKKL SMEACMHAAQ NEMLPLRVVV
501: QVLFYEQARA AAATNNGEKN TTELPSNIKA LLAAHNIDPS NPNAAAFSTT TSIAAPEDRW SVSGLKSPKS KLSGTLRSKL AEDEEVDERF MNGDGGRTPS
601: RFKAFCAIPG RPKKMFSKLL SINRNSSDKN C

Arabidopsis Description

BTB/POZ domain-containing protein At1g67900 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9V6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.