Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0477000-01 | Rice | cytosol, mitochondrion, plastid | 53.68 | 16.27 |
| Os09t0266600-01 | Rice | cytosol | 23.16 | 10.58 |
| Os03t0609800-02 | Rice | cytosol | 28.95 | 8.68 |
| Os12t0583500-01 | Rice | cytosol, plasma membrane | 26.84 | 7.99 |
| Os03t0205700-01 | Rice | cytosol | 24.21 | 7.6 |
| Os04t0636500-01 | Rice | plasma membrane | 24.21 | 7.14 |
| Os03t0347700-01 | Rice | mitochondrion, plastid | 24.21 | 6.86 |
| Os01t0780600-01 | Rice | plasma membrane | 22.63 | 6.53 |
| Os12t0613250-00 | Rice | plasma membrane | 22.11 | 6.46 |
| Os06t0184500-00 | Rice | cytosol | 21.58 | 6.37 |
| Os08t0130600-01 | Rice | plasma membrane | 21.05 | 6.24 |
| Os11t0118500-00 | Rice | plastid | 20.53 | 6.07 |
| Os12t0117600-01 | Rice | plastid | 20.53 | 5.99 |
| Os03t0738900-00 | Rice | nucleus, plasma membrane, plastid | 20.53 | 5.95 |
| Os03t0206700-00 | Rice | plasma membrane | 19.47 | 5.91 |
| Os02t0568200-00 | Rice | cytosol | 23.68 | 5.91 |
| Os09t0420900-01 | Rice | cytosol | 17.89 | 5.5 |
| Os12t0117400-01 | Rice | plasma membrane | 14.21 | 4.74 |
| Os03t0767600-01 | Rice | cytosol | 16.84 | 4.69 |
| Os11t0118300-01 | Rice | cytosol, mitochondrion, nucleus | 14.21 | 4.38 |
| Os12t0613300-02 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os02t0594700-01 | EnsemblPlantsGene:Os02g0594700 | InterPro:IPR027356 | InterPro:NPH3_dom | PANTHER:PTHR32370 | PANTHER:PTHR32370:SF33 |
| PFAM:PF03000 | PFscan:PS51649 | ProteinID:BAF09221.2 | ProteinID:BAS79539.1 | SEG:seg | UniParc:UPI0001B66437 |
| UniProt:Q0DZW7 | MapMan:35.1 | : | : | : | : |
Description
Similar to Non-phototropic hypocotyl 3. (Os02t0594700-01)
Coordinates
chr2:+:23046483..23047393
Molecular Weight (calculated)
20665.5 Da
IEP (calculated)
9.515
GRAVY (calculated)
-0.479
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: QVHSEMSKSA RKRLCRVINC RKLSDKACAH AAQNELLPLR VVVQVLFFEH ARAAAMAGGA HAAAELPGSI RALLQSKSSG SDQEDDAADR VDEQRLRALA
101: AGASPGDDWS VEGLRRAASK IATLRMKLEE DDDHDGGGGD DEEFARRQQA GLARSASLRF RAFCAIPAAR PKRMLSKLWP LARGVTTERH
101: AGASPGDDWS VEGLRRAASK IATLRMKLEE DDDHDGGGGD DEEFARRQQA GLARSASLRF RAFCAIPAAR PKRMLSKLWP LARGVTTERH
001: MKFMKLGSRP DTFYTSEDLR CVSSEVSSDF TIEVSGSRYL LHKFPLLSKC LRLQRMCSES PESIIQLPEF PGGVEAFELC AKFCYGITIT ISAYNIVAAR
101: CAAEYLQMSE EVEKGNLVYK LEVFFNSCIL NGWRDSIVTL QTTKAFPLWS EDLAITSRCI EAIASKVLSH PSKVSLSHSH SRRVRDDDMS SNRAAASSRG
201: WWAEDIAELG IDLYWRTMIA IKSGGKVPAS LIGDALRVYA SKWLPTLQRN RKVVKKKEDS DSDSDTDTSS KHRLLLESII SLLPAEKGAV SCSFLLKLLK
301: AANILNASTS SKMELARRVA LQLEEATVSD LLIPPMSYKS ELLYDVDIVA TILEQFMVQG QTSPPTSPLR GKKGMMDRRR RSRSAENIDL EFQESRRSSS
401: ASHSSKLKVA KLVDGYLQQI ARDVNLPLSK FVTLAESVPE FSRLDHDDLY RAIDIYLKAH KNLNKSERKR VCRVLDCKKL SMEACMHAAQ NEMLPLRVVV
501: QVLFYEQARA AAATNNGEKN TTELPSNIKA LLAAHNIDPS NPNAAAFSTT TSIAAPEDRW SVSGLKSPKS KLSGTLRSKL AEDEEVDERF MNGDGGRTPS
601: RFKAFCAIPG RPKKMFSKLL SINRNSSDKN C
101: CAAEYLQMSE EVEKGNLVYK LEVFFNSCIL NGWRDSIVTL QTTKAFPLWS EDLAITSRCI EAIASKVLSH PSKVSLSHSH SRRVRDDDMS SNRAAASSRG
201: WWAEDIAELG IDLYWRTMIA IKSGGKVPAS LIGDALRVYA SKWLPTLQRN RKVVKKKEDS DSDSDTDTSS KHRLLLESII SLLPAEKGAV SCSFLLKLLK
301: AANILNASTS SKMELARRVA LQLEEATVSD LLIPPMSYKS ELLYDVDIVA TILEQFMVQG QTSPPTSPLR GKKGMMDRRR RSRSAENIDL EFQESRRSSS
401: ASHSSKLKVA KLVDGYLQQI ARDVNLPLSK FVTLAESVPE FSRLDHDDLY RAIDIYLKAH KNLNKSERKR VCRVLDCKKL SMEACMHAAQ NEMLPLRVVV
501: QVLFYEQARA AAATNNGEKN TTELPSNIKA LLAAHNIDPS NPNAAAFSTT TSIAAPEDRW SVSGLKSPKS KLSGTLRSKL AEDEEVDERF MNGDGGRTPS
601: RFKAFCAIPG RPKKMFSKLL SINRNSSDKN C
Arabidopsis Description
BTB/POZ domain-containing protein At1g67900 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9V6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.