Factsheet for Os04t0636500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002146_P001	Maize	cytosol	67.86	70.48
EES11510	Sorghum	cytosol	68.01	68.87
TraesCS2B01G557300.2	Wheat	cytosol	68.94	68.62
TraesCS2D01G529600.1	Wheat	cytosol	68.48	67.85
TraesCS2A01G526900.1	Wheat	cytosol	68.48	67.64
GSMUA_AchrUn_...	Banana	cytosol	38.82	58.82
VIT_08s0040g01800.t01	Wine grape	cytosol	50.93	52.56
CDX70320	Canola	cytosol	46.58	52.45
VIT_13s0019g04420.t01	Wine grape	cytosol	50.16	52.18
CDY10395	Canola	cytosol	43.94	52.12
AT5G03250.1	Thale cress	cytosol	47.05	51.18
CDX80858	Canola	cytosol	46.58	51.02
Bra005737.1-P	Field mustard	cytosol	46.58	51.02
Os01t0780600-01	Rice	plasma membrane	52.17	50.99
Solyc09g007820.1.1	Tomato	cytosol	47.05	50.75
CDY11245	Canola	cytosol	46.43	50.0
KRH21111	Soybean	cytosol	47.36	49.92
PGSC0003DMT400093531	Potato	cytosol	41.61	49.81
KRH19874	Soybean	cytosol	45.03	49.24
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	46.43	49.02
AT5G13600.1	Thale cress	cytosol	44.88	48.9
KRH32482	Soybean	cytosol	44.41	48.56
CDX85639	Canola	cytosol	43.01	48.43
Os08t0130600-01	Rice	plasma membrane	47.98	48.21
KRH34860	Soybean	cytosol	45.96	47.9
Os12t0613250-00	Rice	plasma membrane	48.14	47.69
KRG91918	Soybean	cytosol	45.65	47.65
Bra008815.1-P	Field mustard	cytosol	44.72	47.45
CDY72506	Canola	cytosol	9.32	47.24
CDX69627	Canola	cytosol	44.41	47.12
CDY09812	Canola	cytosol	44.25	46.88
Bra023423.1-P	Field mustard	cytosol	36.02	42.03
Os03t0738900-00	Rice	nucleus, plasma membrane, plastid	37.73	37.04
Os03t0767600-01	Rice	cytosol	39.13	36.9
Os03t0609800-02	Rice	cytosol	33.7	34.23
Os03t0205700-01	Rice	cytosol	31.52	33.55
Os11t0118500-00	Rice	plastid	33.07	33.13
Os12t0583500-01	Rice	cytosol, plasma membrane	32.76	33.07
Os12t0117600-01	Rice	plastid	33.39	33.03
Os04t0477000-01	Rice	cytosol, mitochondrion, plastid	31.83	32.7
Os06t0184500-00	Rice	cytosol	31.99	31.99
Os03t0206700-00	Rice	plasma membrane	30.9	31.79
Os03t0347700-01	Rice	mitochondrion, plastid	32.76	31.45
Os09t0420900-01	Rice	cytosol	29.81	31.07
Os02t0568200-00	Rice	cytosol	35.71	30.18
Os12t0117400-01	Rice	plasma membrane	25.93	29.3
Os09t0266600-01	Rice	cytosol	18.01	27.88
Os11t0118300-01	Rice	cytosol, mitochondrion, nucleus	25.78	26.9
Os02t0594700-01	Rice	cytosol, mitochondrion	7.14	24.21
Os12t0613300-02	Rice	nucleus	1.09	2.36

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:4337143	EMBL:AK109716	ProteinID:BAF15932.1	ProteinID:BAS91218.1
InterPro:BTB/POZ_dom	ProteinID:CAE04162.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	EnsemblPlantsGene:Os04g0636500	EnsemblPlants:Os04t0636500-01	PFAM:PF00651
PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF77	UniProt:Q0J9Q5
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI00001B1E1C	RefSeq:XP_015637062.1	SEG:seg

Description

BTB domain containing protein. (Os04t0636500-01)

Coordinates

chr4:+:32365686..32369961

Molecular Weight (calculated)

70033.1 Da

IEP (calculated)

4.665

GRAVY (calculated)

-0.185

Length

644 amino acids

Sequence
(BLAST)

001: MAITKVLGSK PADCFQFQDP NSWTCMTELV SDVVVEVGDF SFHLHKFPLM SRSGTLQKLI SEAAAGADDG EPCSVKLHDV PGGAAAFELA ARFCYDVRAE
101: LDAGNVVALR CAAEHLGMTE DHGGEGNLVE QAEAFLRDVL GSWDDALRAL RSCDGALLPL AEELLVVPRC IDALASKACA DPTLFGWPMV EYYTARGLEE
201: TVMWNGIATA GKPRSPGPDW WYKQASSLKL PVYKRLITAM RSKGMSPENI AGSLTHYAKR HLSGLTRHSG YVGGGGASGT VLSDVEQRAL LEEIVALLPV
301: ERGVATTRFL LGLLRTATIL NAGAACRDAL ERMAGNQLEE AALEDLLIPN TGYAVETLYD VDCVQRMLEQ FVAANTSAFA ASPEITDEAQ LVDGPSGELM
401: PISTVAKLVD GYLAEVATDT NVKLSKFQSI AELVPDYARA IDDGIYRAID IYLKAHSWLT ASEREQLCRL MNCQKLSLEA CTHAAQNERL PLRVVVQVLF
501: FEQLRLRTTV AGWFFVADNV DQGSPIAAGR YAPERSGELD FGAGPPEEED GDDDDDEARN NVRSSSSATM SVDDIRQRVV ELEEECSSMR EEIHRIGKPK
601: GALSRLFRKL GLGGRSAARR QQQQPPPPPT SSGDERRKSM SLEC

Best Arabidopsis Sequence Match ( AT5G03250.1 )
(BLAST)

001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES STDDGSGCVL SLDEIPGGGK TFELVTKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEEV IDYAEDLHII SRCVDSLAVK ACADPSLFNW PVGGGKNATS GQNTEDESHL
201: WNGISASGKM LQHTGEDWWF DDASFLSLPL FKRLITAIEA RGMKLENIAM AVMYYTRKHV PLMNRQVNMD EQVIETPNPS EEDQKTCLEE IVGLLPSKKG
301: VNPTKFLLRL LQTAMVLHAS QSSRENLERR IGNQLDQAAL VDLLIPNMGY SETLYDVECV LRMIEQFVSS TEQAGIVPSP CIIEEGHLVK DGADLLTPTT
401: LVATLVDGYL AEVAPDVNLK LAKFEAIAAA IPDYARPLDD GVYHAIDVYL KAHPWITDSE REHICRLMNC QKLSLEASTH AAQNERLPLR VIVQVLFFEQ
501: LRLRTSVSGW FFVSENLDNP DNQHGANGGL LKPRGENVRE RVSELEKECM NMKQELHKLV RTKRSWKNFT RKLNFKKKSE CCKPKDQATP AI

Arabidopsis Description

BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.