CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023313_P001	Maize	plastid	84.32	82.52
Os11t0118500-00	Rice	plastid	81.37	81.49
TraesCS5D01G146000.1	Wheat	plastid	79.5	81.27
TraesCS5B01G145100.1	Wheat	plastid	79.19	80.95
TraesCS5A01G146300.1	Wheat	plastid	79.19	80.95
Os12t0117600-01	Rice	plastid	81.83	80.95
HORVU5Hr1G046340.2	Barley	plastid	79.19	80.57
HORVU0Hr1G011770.1	Barley	cytosol	55.9	79.12
GSMUA_Achr7P21950_001	Banana	plastid	63.51	72.65
VIT_08s0056g00610.t01	Wine grape	cytosol	60.25	64.45
Solyc09g048980.2.1	Tomato	cytosol	51.71	63.07
PGSC0003DMT400010359	Potato	cytosol	56.06	62.46
KRH00498	Soybean	cytosol, plastid	57.76	61.18
KRH40661	Soybean	plastid	57.45	60.86
CDX73937	Canola	plastid	51.55	56.85
CDY00659	Canola	plastid	51.55	56.75
Bra001349.1-P	Field mustard	plastid	51.24	56.6
AT3G08660.1	Thale cress	plastid	51.09	56.53
AT3G08570.1	Thale cress	plastid	53.73	56.08
CDY02305	Canola	cytosol	51.09	54.2
CDY09561	Canola	cytosol	50.78	54.14
Bra032401.1-P	Field mustard	cytosol	50.62	53.71
OQU92601	Sorghum	plastid	39.44	38.43
KXG39906	Sorghum	cytosol	35.56	37.24
EER91175	Sorghum	cytosol	34.63	35.34
EES14497	Sorghum	cytosol	35.25	34.5
EES03716	Sorghum	cytosol	33.85	33.49
EES11510	Sorghum	cytosol	32.14	32.55
OQU91026	Sorghum	cytosol, nucleus, plastid	29.97	32.27
KXG25806	Sorghum	cytosol	31.21	30.73
EER93390	Sorghum	cytosol	31.68	30.18
EER98911	Sorghum	cytosol	28.42	29.56
OQU93039	Sorghum	cytosol	27.95	29.56
EER91236	Sorghum	cytosol	28.57	29.07
OQU82741	Sorghum	plastid	26.24	28.07
EES07014	Sorghum	nucleus	33.7	28.07
OQU79444	Sorghum	cytosol	27.8	27.8
EES10995	Sorghum	mitochondrion	27.64	27.22
EES05363	Sorghum	cytosol, nucleus, plastid	27.02	27.06
KXG35200	Sorghum	cytosol	23.76	26.47
EER89339	Sorghum	cytosol	25.93	26.3
KXG22914	Sorghum	plastid	25.78	23.25

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8074842	InterPro:BTB/POZ_dom	UniProt:C5YR78	ncoils:Coil
EnsemblPlants:EES16593	ProteinID:EES16593	ProteinID:EES16593.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF5	InterPro:SKP1/BTB/POZ_sf	EnsemblPlantsGene:SORBI_3008G026600	SUPFAM:SSF54695	unigene:Sbi.2636
UniParc:UPI0001A884B1	RefSeq:XP_002442755.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:2396183..2401172

Molecular Weight (calculated)

71051.2 Da

IEP (calculated)

6.733

GRAVY (calculated)

-0.200

Length

644 amino acids

Sequence
(BLAST)

001: MGMGSDAAAV LFPFSTTTTT TSPRLCGTAV SSHRRIFSDV AEDVTVSVDG QSFLLHKFPL VSRCGRVRKM VVDSKDPDLL KLELVNVPGG AFAFELAAKF
101: CYGSNFEITT GNVAHLRCVA EYLEMTEDYQ EENLIFRTET YLNEIVLKNL DKSLEVLCKC DGLDPVVEEV GLVDRCVDAI AVNASKEQLV SGLAHLECDV
201: GSAKLRMHCQ DWWVEDLSAL RIDHYRRVIA AMRRNGVRPE SIGTSITHYA QTSLKGVERR HVWDSGPFVG DSQRMIVETL IDLLATENIT TVTLSFLFGM
301: LRMAIEVDAS LDCRIEVEKR IGLQLEMASL DDLLIPSTQT SDSMFDVDTV HRILVNFLQR IDEDSSGELS PCGYDSDGLK SPSHSSVLKV GRLMDGYLAE
401: VAPDPYLKLQ KFMALIELLP DYARIVDDGL YRAIDIYLKA HPSLTESECK KLCKLIDCQK LSQDASSHAA QNDRLPIQMV VRVLYFEQLR LKSSFSGGGS
501: GCVSGLGLGA DGSLSQRFVC SSSGVPSSCV SPQRDNYASL RRENRELKLE ISRMRVRLTE LEREQGLMKQ QGRMRGGDGG GRHGGEQGRA FLASLSRGFG
601: RITMFGVGGG PAAADRRRKK SGGRSSQCSD GKARRRHKAS FAYD

Best Arabidopsis Sequence Match ( AT3G08570.1 )
(BLAST)

001: MGIISDNAQS HSSSSAPAPS IFSSSFATRI FSDVAGDITI VVDGESFLLH KFPLVARCGK IRKMVAEMKE SSSNLSHTEL RDFPGGSKTF ELAMKFCYGI
101: NFEITISNVV AIRCAAGYLE MTEDFKEENL IARTETYLEQ VAFRSLEKSV EVLCSCETLY PQDIAETAHI PDRCVEAIAV NACREQLVLG LSRLNRGTES
201: GELKRGDSPE WWIEDLSALR IDYYARVVSA MARTGLRSES IITSLMHYAQ ESLKGIRNCK ERTKLDSGTF ENEQRNVLEA IVSLFPNDNV PLSFLFGMLR
301: VGITINVAIS CRLELERRIA QQLETVSLDD LLIPVVRDGD SMYDVDTVHR ILVCFLKKIE EEEEYDEDCC YENETENLTG SMCHSSLLKV GRIMDAYLAE
401: IAPDPCLSLH KFMALIEILP DYARVMDDGL YRAIDMFLKG HPSLNEQECK SLCKFIDTQK LSQEACNHVA QNDRLPMQMV VRVLYSEQLR MKNVMSGESG
501: EGLLLSSQKH SSENPSRAVS PRDTYASLRR ENRELKLEIS RVRVRLTELE KEQILMKQGM MEKSGHGGTL LTSLSKGIGR ISIFGGGPTE GKLRNANRKS
601: KSRLERKTVR SRPESMF

Arabidopsis Description

BTB/POZ domain-containing protein At3g08570 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Z7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.