Factsheet for TraesCS5D01G146000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G145100.1	Wheat	plastid	99.37	99.37
TraesCS5A01G146300.1	Wheat	plastid	99.37	99.37
HORVU5Hr1G046340.2	Barley	plastid	98.57	98.1
HORVU0Hr1G011770.1	Barley	cytosol	68.41	94.73
Os11t0118500-00	Rice	plastid	85.56	83.83
Os12t0117600-01	Rice	plastid	85.87	83.1
EES16593	Sorghum	plastid	81.27	79.5
GSMUA_Achr7P21950_001	Banana	plastid	64.6	72.29
Zm00001d023313_P001	Maize	plastid	73.81	70.67
VIT_08s0056g00610.t01	Wine grape	cytosol	60.48	63.29
KRH00498	Soybean	cytosol, plastid	59.52	61.68
KRH40661	Soybean	plastid	59.37	61.51
PGSC0003DMT400010359	Potato	cytosol	56.03	61.07
Solyc09g048980.2.1	Tomato	cytosol	51.11	60.98
AT3G08570.1	Thale cress	plastid	54.6	55.75
AT3G08660.1	Thale cress	plastid	51.43	55.67
CDX73937	Canola	plastid	51.59	55.65
CDY00659	Canola	plastid	51.59	55.56
Bra001349.1-P	Field mustard	plastid	51.27	55.4
CDY09561	Canola	cytosol	51.75	53.97
CDY02305	Canola	cytosol	51.59	53.54
Bra032401.1-P	Field mustard	cytosol	51.43	53.38
TraesCS5D01G463700.1	Wheat	plastid	41.27	39.82
TraesCS4D01G255500.1	Wheat	cytosol	35.71	36.76
TraesCS7D01G306400.1	Wheat	cytosol	34.76	34.06
TraesCS5D01G385100.1	Wheat	plastid	33.02	32.7
TraesCS5D01G051100.1	Wheat	cytosol	32.7	32.59
TraesCS3D01G314000.1	Wheat	cytosol	33.17	32.06
TraesCS2D01G507400.1	Wheat	nucleus	27.46	31.45
TraesCS5D01G389200.2	Wheat	cytosol, plastid	31.9	31.07
TraesCS4D01G120400.1	Wheat	cytosol, plastid	27.62	30.47
TraesCS2D01G529600.1	Wheat	cytosol	31.11	30.15
TraesCS5D01G413400.1	Wheat	cytosol	31.9	29.87
TraesCS5D01G082800.1	Wheat	cytosol	28.73	29.1
TraesCS4D01G077700.3	Wheat	cytosol	28.89	28.71
TraesCS4D01G256700.1	Wheat	cytosol	27.46	28.55
TraesCS5D01G231300.1	Wheat	cytosol	27.62	27.32
TraesCS6D01G192300.1	Wheat	cytosol	26.67	26.79
TraesCS7D01G150700.2	Wheat	cytosol	27.14	26.15
TraesCS5D01G175800.1	Wheat	cytosol	23.17	25.13

Protein Annotations

EnsemblPlants:TraesCS5D01G146000.1	EnsemblPlantsGene:TraesCS5D01G146000	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR32370	PANTHER:PTHR32370:SF5	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
SEG:seg	SUPFAM:SSF54695	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5D:-:232618410..232621668

Molecular Weight (calculated)

69924.4 Da

IEP (calculated)

6.953

GRAVY (calculated)

-0.203

Length

630 amino acids

Sequence
(BLAST)

001: MGLASDSAGF PFSAKLSAAN SPRFCNPMSR RIFSDVAGDI TVSVDGQSFL LHKFPLVSRC GRIRRMVAEA KDPDLSKLEL VNVPGGATAF ELAAKFCYGS
101: NFEITTANVA HLRCIAEYLE MTEDYQEENL IVRTEMYLND LVVKNLEKSL QVLCACEGLD PMVEEIGFVD RCVDAIAMNA SKEQLVSGLA HLECDAGSGK
201: LRMHCQDWWV EDLSALRIDY YQRVIAAMRR SGVRPESIGT SIVHYAQTAL KGIERRHVWD SGPLVGDNQR VVVETLINLM ATEKITAVTL SFLFGMLRMA
301: IEVDAGLDYR IEVEKRIGLH LEMASLDDLL IPSMQTSESM FDVDTVHRIL VNFLQRIEED DSGDLSPCGY ESDGLKSPSH GSVLKVGRLM DGYLAEIAPD
401: PYLKLQKFMT LIELLPDYAR IVDDGLYRAI DIYLKAHPSL MESECKKLCK LIDCQKLSQD ASSHAAQNDR LPMQMVVRVL YFEQLRLKSS FSGGHSGGGG
501: EYCSFSQRIT MPISGSGVPS SCVSPRAAGA ADSYASLRRE NRELKLEVSR MRVRLTELER EQGMMKQGMR DGRPGEHGRA FFASISRGIG RMAMFGPAGE
601: RRKKSSRATA SSQCSEGKSR RRKKPSVTYA

Best Arabidopsis Sequence Match ( AT3G08570.1 )
(BLAST)

001: MGIISDNAQS HSSSSAPAPS IFSSSFATRI FSDVAGDITI VVDGESFLLH KFPLVARCGK IRKMVAEMKE SSSNLSHTEL RDFPGGSKTF ELAMKFCYGI
101: NFEITISNVV AIRCAAGYLE MTEDFKEENL IARTETYLEQ VAFRSLEKSV EVLCSCETLY PQDIAETAHI PDRCVEAIAV NACREQLVLG LSRLNRGTES
201: GELKRGDSPE WWIEDLSALR IDYYARVVSA MARTGLRSES IITSLMHYAQ ESLKGIRNCK ERTKLDSGTF ENEQRNVLEA IVSLFPNDNV PLSFLFGMLR
301: VGITINVAIS CRLELERRIA QQLETVSLDD LLIPVVRDGD SMYDVDTVHR ILVCFLKKIE EEEEYDEDCC YENETENLTG SMCHSSLLKV GRIMDAYLAE
401: IAPDPCLSLH KFMALIEILP DYARVMDDGL YRAIDMFLKG HPSLNEQECK SLCKFIDTQK LSQEACNHVA QNDRLPMQMV VRVLYSEQLR MKNVMSGESG
501: EGLLLSSQKH SSENPSRAVS PRDTYASLRR ENRELKLEIS RVRVRLTELE KEQILMKQGM MEKSGHGGTL LTSLSKGIGR ISIFGGGPTE GKLRNANRKS
601: KSRLERKTVR SRPESMF

Arabidopsis Description

BTB/POZ domain-containing protein At3g08570 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Z7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.