Factsheet for GSMUA_Achr7P21950_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2
plasma membrane 1
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G146000.1	Wheat	plastid	72.29	64.6
TraesCS5B01G145100.1	Wheat	plastid	72.11	64.44
TraesCS5A01G146300.1	Wheat	plastid	72.11	64.44
Os11t0118500-00	Rice	plastid	73.36	64.23
Os12t0117600-01	Rice	plastid	73.89	63.9
EES16593	Sorghum	plastid	72.65	63.51
HORVU5Hr1G046340.2	Barley	plastid	71.4	63.51
VIT_08s0056g00610.t01	Wine grape	cytosol	67.85	63.46
PGSC0003DMT400010359	Potato	cytosol	62.7	61.07
KRH40661	Soybean	plastid	65.36	60.53
Solyc09g048980.2.1	Tomato	cytosol	56.31	60.04
KRH00498	Soybean	cytosol, plastid	64.83	60.03
Zm00001d023313_P001	Maize	plastid	68.21	58.36
HORVU0Hr1G011770.1	Barley	cytosol	46.89	58.02
AT3G08660.1	Thale cress	plastid	56.84	54.98
Bra001349.1-P	Field mustard	plastid	56.13	54.2
CDY00659	Canola	plastid	56.31	54.19
CDX73937	Canola	plastid	55.77	53.77
AT3G08570.1	Thale cress	plastid	58.61	53.48
CDY09561	Canola	cytosol	55.95	52.15
Bra032401.1-P	Field mustard	cytosol	55.42	51.4
CDY02305	Canola	cytosol	55.42	51.4
GSMUA_Achr6P27970_001	Banana	cytosol	46.0	50.1
GSMUA_Achr8P30170_001	Banana	plastid	42.27	42.65
GSMUA_Achr1P11260_001	Banana	plastid	42.81	42.06
GSMUA_Achr7P26300_001	Banana	cytosol	42.1	40.03
GSMUA_Achr5P02440_001	Banana	cytosol	36.41	35.78
GSMUA_AchrUn_...	Banana	cytosol	26.64	35.29
GSMUA_Achr3P20380_001	Banana	cytosol	35.7	34.96
GSMUA_Achr5P29690_001	Banana	cytosol, plastid	36.94	34.67
GSMUA_Achr11P...	Banana	cytosol, plastid	35.35	34.37
GSMUA_Achr9P26440_001	Banana	cytosol	35.52	34.36
GSMUA_Achr8P04840_001	Banana	cytosol	35.52	34.01
GSMUA_Achr6P30010_001	Banana	cytosol	33.04	33.94
GSMUA_Achr2P02890_001	Banana	cytosol	33.75	33.69
GSMUA_Achr9P26110_001	Banana	cytosol	35.88	33.33
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	29.48	32.87
GSMUA_Achr4P01950_001	Banana	cytosol	23.8	32.84
GSMUA_Achr5P00550_001	Banana	cytosol	36.23	32.43
GSMUA_Achr4P31620_001	Banana	cytosol	33.57	31.66
GSMUA_Achr4P10900_001	Banana	cytosol	31.26	31.6
GSMUA_Achr8P16390_001	Banana	cytosol	28.42	30.65
GSMUA_Achr10P...	Banana	cytosol	29.84	30.38
GSMUA_Achr10P...	Banana	cytosol	29.84	29.84
GSMUA_Achr10P...	Banana	cytosol	30.02	29.7
GSMUA_Achr5P01710_001	Banana	cytosol	30.37	29.43
GSMUA_Achr1P21440_001	Banana	cytosol	30.73	28.45
GSMUA_Achr7P26250_001	Banana	cytosol	31.08	28.04
GSMUA_Achr3P12020_001	Banana	cytosol	26.47	27.29
GSMUA_Achr3P04740_001	Banana	cytosol	28.06	26.78
GSMUA_Achr2P13430_001	Banana	cytosol	31.44	26.38
GSMUA_Achr3P14590_001	Banana	cytosol	26.11	25.65
GSMUA_Achr3P25690_001	Banana	nucleus	34.1	16.08

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr7G21950_001	EnsemblPlants:GSMUA_Achr7P21950_001	EnsemblPlants:GSMUA_Achr7T21950_001	InterPro:IPR000210	InterPro:IPR027356
UniProt:M0TJN1	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF5	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI0002952343	SEG:seg

Description

BTB/POZ domain-containing protein At5g48800 [Source:GMGC_GENE;Acc:GSMUA_Achr7G21950_001]

Coordinates

chr7:+:24567274..24571908

Molecular Weight (calculated)

63148.9 Da

IEP (calculated)

6.746

GRAVY (calculated)

-0.213

Length

563 amino acids

Sequence
(BLAST)

001: MSETAFPFSA AKLATSPRFC NPITTRRIFS DVAGDITLYV DGQSFLLHKF PLVSRSGKIR KTVMDSRDPD LSMLELHGVP GGAEAFELAA KFCYGTNFEI
101: TATNVAHLRC IAEYLEMTED YQEKNLIARA ETYLSEIVVQ SLEKSLEVLC SCDGLHPIAE EVGILDRCVD AVAINASKEQ LDWWVEDLSV LKIDIYQRVI
201: ASMRRTGVRS DSIVQSLMHY AQTSLKGIER RHNWESGIVV GDKQRVIIEA LVDLLATENI TTVPLSFLFG MLRMAIELAT SLGCRLELER RIGFQLELAS
301: LDDLLIPSSQ PNDSVFDVDT VHRMLVNFIQ RVEEDDSEDS SHCGYESLSV KSPSHSSVLK VGRLIDGYLA EIAPDPHLSL SKFMAIIELL PDYARIIDDG
401: LYRAVDIYLK AHPSLTESEC KKLCKLIDCQ KISQEAANHA AQNDRLPVQM VVGRIISSSG VQSAAVSPRD NYASLRRENR ELKLEIARMR VRLSELEKEQ
501: AFMKQGMRDN RSQEHSKAFL SSISRGIGRI AMFSPSQRKH QKSTKKAQVS DAKSRRRQRQ SAS

Best Arabidopsis Sequence Match ( AT3G08570.1 )
(BLAST)

001: MGIISDNAQS HSSSSAPAPS IFSSSFATRI FSDVAGDITI VVDGESFLLH KFPLVARCGK IRKMVAEMKE SSSNLSHTEL RDFPGGSKTF ELAMKFCYGI
101: NFEITISNVV AIRCAAGYLE MTEDFKEENL IARTETYLEQ VAFRSLEKSV EVLCSCETLY PQDIAETAHI PDRCVEAIAV NACREQLVLG LSRLNRGTES
201: GELKRGDSPE WWIEDLSALR IDYYARVVSA MARTGLRSES IITSLMHYAQ ESLKGIRNCK ERTKLDSGTF ENEQRNVLEA IVSLFPNDNV PLSFLFGMLR
301: VGITINVAIS CRLELERRIA QQLETVSLDD LLIPVVRDGD SMYDVDTVHR ILVCFLKKIE EEEEYDEDCC YENETENLTG SMCHSSLLKV GRIMDAYLAE
401: IAPDPCLSLH KFMALIEILP DYARVMDDGL YRAIDMFLKG HPSLNEQECK SLCKFIDTQK LSQEACNHVA QNDRLPMQMV VRVLYSEQLR MKNVMSGESG
501: EGLLLSSQKH SSENPSRAVS PRDTYASLRR ENRELKLEIS RVRVRLTELE KEQILMKQGM MEKSGHGGTL LTSLSKGIGR ISIFGGGPTE GKLRNANRKS
601: KSRLERKTVR SRPESMF

Arabidopsis Description

BTB/POZ domain-containing protein At3g08570 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Z7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.