Factsheet for GSMUA_Achr9P26110_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P30010_001	Banana	cytosol	73.27	81.02
GSMUA_Achr5P02440_001	Banana	cytosol	71.29	75.39
VIT_10s0003g04490.t01	Wine grape	cytosol	70.63	67.72
Solyc02g021640.2.1	Tomato	nucleus	69.64	67.09
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	69.64	67.09
GSMUA_Achr4P31620_001	Banana	cytosol	65.35	66.33
EER91175	Sorghum	cytosol	68.32	65.61
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	67.82	65.34
KRH12771	Soybean	cytosol	69.14	65.16
KRH37734	Soybean	cytosol	68.15	64.23
GSMUA_Achr5P00550_001	Banana	cytosol	65.68	63.27
HORVU5Hr1G093120.2	Barley	cytosol	65.18	62.3
TraesCS5D01G385100.1	Wheat	plastid	65.35	62.26
TraesCS5D01G051100.1	Wheat	cytosol	62.54	59.97
TraesCS5A01G042600.1	Wheat	cytosol	62.54	59.87
TraesCS5A01G375500.3	Wheat	peroxisome	63.04	59.32
TraesCS5B01G377600.1	Wheat	cytosol	65.51	58.55
CDX90249	Canola	cytosol, mitochondrion, nucleus	60.73	58.32
Os12t0613250-00	Rice	plasma membrane	62.54	58.31
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	63.53	57.89
CDY09586	Canola	cytosol	62.21	57.47
CDY02293	Canola	cytosol, mitochondrion, nucleus	62.38	57.36
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	62.54	57.34
TraesCS5B01G046200.2	Wheat	mitochondrion	60.73	57.32
CDY27653	Canola	cytosol	56.77	55.66
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	46.04	55.25
GSMUA_AchrUn_...	Banana	cytosol	38.61	55.06
CDX99692	Canola	cytosol, mitochondrion, nucleus	58.58	55.04
GSMUA_Achr2P02890_001	Banana	cytosol	50.33	54.08
Bra025440.1-P	Field mustard	cytosol	49.67	52.53
HORVU5Hr1G010370.2	Barley	plastid	62.87	48.29
GSMUA_Achr9P26440_001	Banana	cytosol	43.89	45.7
GSMUA_Achr4P01950_001	Banana	cytosol	30.2	44.85
GSMUA_Achr8P04840_001	Banana	cytosol	41.91	43.2
GSMUA_Achr3P20380_001	Banana	cytosol	39.93	42.09
GSMUA_Achr10P...	Banana	cytosol	35.64	39.06
GSMUA_Achr5P01710_001	Banana	cytosol	37.29	38.9
GSMUA_Achr4P10900_001	Banana	cytosol	35.64	38.78
GSMUA_Achr6P27970_001	Banana	cytosol	32.84	38.49
GSMUA_Achr10P...	Banana	cytosol	33.99	36.2
GSMUA_Achr8P30170_001	Banana	plastid	33.17	36.02
GSMUA_Achr7P21950_001	Banana	plastid	33.33	35.88
GSMUA_Achr3P04740_001	Banana	cytosol	34.49	35.42
GSMUA_Achr7P26250_001	Banana	cytosol	36.47	35.42
GSMUA_Achr10P...	Banana	cytosol	32.18	34.64
GSMUA_Achr1P11260_001	Banana	plastid	32.34	34.21
GSMUA_Achr8P16390_001	Banana	cytosol	29.37	34.1
GSMUA_Achr1P21440_001	Banana	cytosol	34.16	34.05
GSMUA_Achr7P26300_001	Banana	cytosol	33.17	33.95
GSMUA_Achr2P13430_001	Banana	cytosol	37.13	33.53
GSMUA_Achr11P...	Banana	cytosol, plastid	30.36	31.78
GSMUA_Achr5P29690_001	Banana	cytosol, plastid	31.19	31.5
GSMUA_Achr3P12020_001	Banana	cytosol	28.05	31.14
GSMUA_Achr3P14590_001	Banana	cytosol	27.56	29.14
CDY12056	Canola	plasma membrane	60.73	22.8
GSMUA_Achr3P25690_001	Banana	nucleus	38.78	19.68
Os12t0613300-02	Rice	nucleus	1.32	2.69

Protein Annotations

EnsemblPlants:GSMUA_Achr9P26110_001	EnsemblPlants:GSMUA_Achr9T26110_001	EnsemblPlantsGene:GSMUA_Achr9G26110_001	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf
PANTHER:PTHR32370	PANTHER:PTHR32370:SF12	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
SEG:seg	SUPFAM:SSF54695	UniParc:UPI000296CC11	UniProt:M0U3L8	MapMan:35.1	:

Description

BTB/POZ domain-containing protein At1g30440 [Source:GMGC_GENE;Acc:GSMUA_Achr9G26110_001]

Coordinates

chr9:+:30576975..30582082

Molecular Weight (calculated)

67716.2 Da

IEP (calculated)

6.211

GRAVY (calculated)

-0.060

Length

606 amino acids

Sequence
(BLAST)

001: MACKKLGSKA DAFQRQGQAW FCTTGLPSDI IVEVSEMSFH LHKFPLLSKS ALLEKLIEES SDEEDGCVVK LCDMPGGDKA FELVAKFCYG VKFELTASNV
101: VFLRCAAEYL QMTEEIAEGN LIAQTEIFLS QIVLRGWKDS IKVLQTCDNL LPHAENLQII KRCIDSLAVK ASRPRNCSSD WWYEEASSLS LPLYKRLISV
201: MESRGIRQEV VAGSVTSYAK KYLPGISRRH SLAPVALTAA PSEEEQRRLL EEIVGLLPLQ KGVTSTKILF GLLRTGMILR ANPTCISNLE KRIGLQLDQA
301: NLEDLLLPNF SYSMETLYNI DCVQRILEHF LAMDQAADGA SPNLVDDEQL IGSPSLAPIT TVAKLIDGYL AEVAPDINLK LPKFQNLAGA VPDYARPLDD
401: GLYRAIDIYL KAHPWLNEAE REQLCRLMDC QKLSLEACTH AAQNERLPLR VVVQVLFFEQ LQLRTSIAGD GGGWASAVRE NQVLKEGMDS MRMRVYELEK
501: ECTSMRQEIE KLGRGKSKWS SVSKKFGFKL KSQMCSAQEE SVSDHQQTGS STIENTNLVL TICFLLVTAM LKPQTKKIHI YVGISFSSWI LVTILLSHQT
601: FTLLSQ

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.