Factsheet for Bra025440.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
plasma membrane 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27653	Canola	cytosol	94.76	87.86
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	81.68	70.38
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	80.63	69.89
Bra010771.1-P	Field mustard	cytosol, mitochondrion, nucleus	77.84	67.99
Solyc02g021640.2.1	Tomato	nucleus	64.92	59.14
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	64.75	58.98
VIT_10s0003g04490.t01	Wine grape	cytosol	64.92	58.86
KRH37734	Soybean	cytosol	64.22	57.23
KRH12771	Soybean	cytosol	64.05	57.08
GSMUA_Achr4P31620_001	Banana	cytosol	56.02	53.77
GSMUA_Achr6P30010_001	Banana	cytosol	50.96	53.28
EER91175	Sorghum	cytosol	58.64	53.25
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	58.29	53.1
GSMUA_Achr5P00550_001	Banana	cytosol	57.77	52.62
GSMUA_Achr5P02440_001	Banana	cytosol	52.36	52.36
TraesCS5D01G385100.1	Wheat	plastid	56.2	50.63
HORVU5Hr1G093120.2	Barley	cytosol	55.85	50.47
GSMUA_Achr9P26110_001	Banana	cytosol	52.53	49.67
TraesCS5A01G042600.1	Wheat	cytosol	54.62	49.45
TraesCS5D01G051100.1	Wheat	cytosol	54.45	49.37
Os12t0613250-00	Rice	plasma membrane	55.5	48.92
Os08t0130600-01	Rice	plasma membrane	54.28	48.52
TraesCS5A01G375500.3	Wheat	peroxisome	53.75	47.83
TraesCS5B01G377600.1	Wheat	cytosol	56.54	47.79
EES14497	Sorghum	cytosol	53.75	46.81
TraesCS7D01G306400.1	Wheat	cytosol	52.36	46.66
HORVU7Hr1G073650.1	Barley	cytosol	52.18	46.65
TraesCS5B01G046200.2	Wheat	mitochondrion	52.18	46.57
TraesCS7B01G209700.1	Wheat	cytosol	51.83	46.19
TraesCS7A01G309700.1	Wheat	cytosol	51.83	46.19
Zm00001d035208_P002	Maize	cytosol	52.53	45.4
Bra005737.1-P	Field mustard	cytosol	42.76	41.67
HORVU5Hr1G010370.2	Barley	plastid	54.28	39.42
Bra008815.1-P	Field mustard	cytosol	40.49	38.22
Bra036858.1-P	Field mustard	cytosol	34.9	34.84
Bra012082.1-P	Field mustard	cytosol	40.66	34.83
Bra037606.1-P	Field mustard	cytosol	38.39	34.32
Bra023423.1-P	Field mustard	cytosol	32.46	33.7
Bra031830.1-P	Field mustard	cytosol	29.84	30.98
Bra032187.1-P	Field mustard	cytosol	25.48	30.48
Bra037460.1-P	Field mustard	cytosol	32.64	30.16
Bra036043.1-P	Field mustard	cytosol	28.8	30.11
Bra001349.1-P	Field mustard	plastid	30.02	29.5
Bra024285.1-P	Field mustard	cytosol	35.6	28.14
Bra012166.1-P	Field mustard	cytosol	27.4	27.89
Bra010603.1-P	Field mustard	cytosol	27.92	27.83
Bra012158.1-P	Field mustard	cytosol	29.14	27.79
Bra037846.1-P	Field mustard	cytosol	25.48	27.76
Bra032401.1-P	Field mustard	cytosol	29.32	27.68
Bra017837.1-P	Field mustard	cytosol	27.75	27.51
Bra022805.1-P	Field mustard	cytosol	27.23	27.13
Bra037773.1-P	Field mustard	cytosol	34.73	27.0
Bra018309.1-P	Field mustard	cytosol, plastid	27.75	26.9
Bra033365.1-P	Field mustard	cytosol	28.8	26.19
Bra029894.1-P	Field mustard	plastid	29.32	26.01
Bra011301.1-P	Field mustard	cytosol	26.0	25.82
Bra025208.1-P	Field mustard	cytosol	25.83	25.78
Bra004064.1-P	Field mustard	cytosol	28.27	25.76
Bra039820.1-P	Field mustard	cytosol	27.92	25.52
Bra024915.1-P	Field mustard	cytosol	24.78	25.31
Bra032564.1-P	Field mustard	cytosol, plastid	28.1	25.24
Bra009047.1-P	Field mustard	cytosol	25.65	23.33
Os12t0613300-02	Rice	nucleus	1.22	2.36
Bra010770.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra025440	EnsemblPlants:Bra025440.1	EnsemblPlants:Bra025440.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356
UniProt:M4E9I4	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF12	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI000254387E	SEG:seg

Description

AT1G30440 (E=2e-167) | phototropic-responsive NPH3 family protein

Coordinates

chrA04:-:8724538..8727431

Molecular Weight (calculated)

64401.8 Da

IEP (calculated)

7.575

GRAVY (calculated)

-0.349

Length

573 amino acids

Sequence
(BLAST)

001: MLTGSMACMK LGSKSDSFKR QGQDWFCTTG LPSDIIIEVG EMSFHLHKFP LLSRSGVMER RIAEASKEGD DKCLIQISDF PGRDKTFELV AKFCYGVKLE
101: LTASNVVCLR CAAKHLEMTE EYGEGNLISQ TGKFFNQVVF KSWKYSIKAL QCCDEVLKYA DEFNITKKCI ESLAMRALAD PNSFVEHGGG PMQSPGGSVL
201: WNGISTGARR EDTSSDWWYE DASMLSFALF KRLITLMDSR GIREEIVAGS LTYYTRKYLP VLKRRHSGSS SITPLSSGSS VLLSEEEQKH LLEEIQELDL
301: PCMQKGLLPT KFFVDMLIIA KILKASPSCI ENLEKRIGMQ LDQATLEDLV MPSFSHTMET LYDVDSVQRI LDYFLSRVHT MPHHPWLAET EREDLCRLLD
401: CQKLSTEACT HAAQNERLPL RIIVQVLFIE QLQLKASVAE CLPVLGSLDG RSRKLGSNGF SGESTKGGWE TAVRENQDLK VGMDKMRMRV CELEKECSKM
501: RQEIEKLDKT TKGGGASGSG SKTWENVSKK LGFGMKLKSH QIDSAQKVSS LKSNNENVKI EKLKDVKERQ GKY

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.