Factsheet for TraesCS7D01G306400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G209700.1	Wheat	cytosol	98.91	98.91
TraesCS7A01G309700.1	Wheat	cytosol	97.67	97.67
HORVU7Hr1G073650.1	Barley	cytosol	96.89	97.19
Os08t0130600-01	Rice	plasma membrane	87.25	87.52
EES14497	Sorghum	cytosol	83.05	81.16
Zm00001d035208_P002	Maize	cytosol	81.65	79.19
VIT_10s0003g04490.t01	Wine grape	cytosol	65.47	66.61
Solyc02g021640.2.1	Tomato	nucleus	62.99	64.39
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	62.67	64.07
KRH12771	Soybean	cytosol	63.3	63.3
KRH37734	Soybean	cytosol	62.67	62.67
TraesCS5D01G051100.1	Wheat	cytosol	60.5	61.55
TraesCS5D01G385100.1	Wheat	plastid	60.81	61.48
CDX90249	Canola	cytosol, mitochondrion, nucleus	57.23	58.32
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	60.03	58.05
CDY09586	Canola	cytosol	58.79	57.62
CDY02293	Canola	cytosol, mitochondrion, nucleus	58.94	57.51
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	59.1	57.49
CDY27653	Canola	cytosol	52.88	55.02
CDX99692	Canola	cytosol, mitochondrion, nucleus	54.28	54.11
Bra025440.1-P	Field mustard	cytosol	46.66	52.36
TraesCS3D01G314000.1	Wheat	cytosol	48.99	48.31
TraesCS2D01G529600.1	Wheat	cytosol	44.48	44.0
TraesCS5D01G389200.2	Wheat	cytosol, plastid	39.04	38.79
TraesCS5D01G413400.1	Wheat	cytosol	40.12	38.34
TraesCS2D01G507400.1	Wheat	nucleus	31.88	37.27
TraesCS4D01G256700.1	Wheat	cytosol	32.97	34.98
TraesCS5D01G146000.1	Wheat	plastid	34.06	34.76
TraesCS5D01G082800.1	Wheat	cytosol	33.59	34.73
TraesCS4D01G077700.3	Wheat	cytosol	33.9	34.38
TraesCS5D01G463700.1	Wheat	plastid	33.75	33.23
TraesCS4D01G255500.1	Wheat	cytosol	30.48	32.03
TraesCS7D01G150700.2	Wheat	cytosol	31.88	31.35
TraesCS5D01G231300.1	Wheat	cytosol	30.95	31.24
TraesCS5D01G175800.1	Wheat	cytosol	27.99	30.98
TraesCS6D01G192300.1	Wheat	cytosol	30.02	30.78
TraesCS4D01G120400.1	Wheat	cytosol, plastid	25.82	29.07
CDY12056	Canola	plasma membrane	57.39	22.86

Protein Annotations

EnsemblPlants:TraesCS7D01G306400.1	EnsemblPlantsGene:TraesCS7D01G306400	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR32370	PANTHER:PTHR32370:SF23	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
SEG:seg	SMART:SM00225	SUPFAM:SSF54695	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr7D:+:387911585..387916284

Molecular Weight (calculated)

70986.3 Da

IEP (calculated)

6.451

GRAVY (calculated)

-0.221

Length

643 amino acids

Sequence
(BLAST)

001: MACLKLGSRA DVFRKQGQDW YCTTGLPSDI TVVVGEQSFH LHKFPLLSKS GLLERLIREK IEKGEDSCAI DLSDIPGGAK AFELAARFCY GVKFELTSSN
101: VVHLRCASEY LEMTEEIAEG NLIAQTENFL TQTVLKSWKD SIKALHTCDD VIDLAEKLQV VKKCIDSVAT KSSTDPDVFG WPVAQYGGPT QSPGGSFLWN
201: GISTGARPRN CSSDWWYDDV SCLSLPLYKK VISAMEYRGV NQDIIVGSLN HYAKRRLPGL NRRKSISDVS NCLSVSTLTA MPSEEEQRYL LEEIDRLLPF
301: QRGVTSCKLL FGLLRTAIFL KASSSCMSNL ERRIGLQLDK ATLEDLLITN MSESIEMLYD VDCVHRILDH FLAMDQETGG ASPGIGEDGH LLASPSLLPI
401: TMVAKLIDGY LAEVAPDANL KLPKFRSLAA AIPDYARPID DGLYRAVDIY LKAHPHLSES EKEELCRVMD CQKLSLEACT HAAQNERLPL RVIVQVLFFE
501: QLQLRSSIAE CLMISENLEG GSRQLGMPTS SEQHRGGGGW PLAARENQAL REGMDGMKQR VAELEKECST MREEIARLGR SRSTGKSRLF SLGAKPQICS
601: TAKDAAPAKA ATSSDDDKLA VVKADATPRL KLSRHKKNLS IEA

Best Arabidopsis Sequence Match ( AT3G44820.1 )
(BLAST)

001: MSPVAKVSEF HREGNDWFCK TGLSSDITVV VDDVKFHLHK FPLVSKCGKL ARMYEDSKST DKQSLWTTVL EEFPGGADNF LIVARFCYGA RVDITSKNLV
101: SIHCAAEYLE MTNEYGEDNL ISQVETFLHK HVLRNWKDCI LALQSSSPVL KSAEKLQMIP KLMNAVSTMV CTDPSLFGWP MMMYGTLQSP GGSILWNGIN
201: TGARMRSSGS DWWYEDISYL SVDLFKRLIK TMETKGIRAE SLAGAMMYYA RKYLPGLGRW QSGTSDSSKS RRRVVSFNLA KASSPSSMPP LDQIALLETI
301: LSLLPEKRGR SFCKFLLGLL RVAFILGVDG NCVKKLEKRI GMQLELATLD NLLILNYSDS ETLYNVDCVE RIVRHFVSSL SSSSSQLPEF SPPSLDPVTS
401: PSPAPLKKVA NLVDSYMAEV ASDVNLKPDK MRSLAAALPE SSRPLYDGLY RAFDIYFKEH PWLSDRDKEQ LCNIMDYQRL SIDACAHASH NDRLPLRVVL
501: QVLFFEQMHL RTALAGGLNV ANTETAHAVT IPGGRTGQEI VQRDGWVTVV RQNQVLKVDM QKMRSRVGEL EEEFQSIKQE MKKRVSKSSS SMSSPRLVKL
601: GCKFLLPRAS DAKNDTVQNS VSSTPRSATA DHTLPRSSRH SKHRKSFSFF G

Arabidopsis Description

BTB/POZ domain-containing protein At3g44820 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYC8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.