Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- nucleus 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5B01G461900.4 | Wheat | plastid | 94.49 | 93.91 |
TraesCS7A01G184200.2 | Wheat | plastid | 95.87 | 93.71 |
HORVU1Hr1G055870.1 | Barley | plastid | 93.42 | 91.73 |
Zm00001d047483_P002 | Maize | plastid | 83.92 | 84.7 |
OQU92601 | Sorghum | plastid | 84.69 | 83.66 |
Os03t0347700-01 | Rice | mitochondrion, plastid | 83.46 | 81.22 |
GSMUA_Achr8P30170_001 | Banana | plastid | 58.35 | 68.28 |
GSMUA_Achr1P11260_001 | Banana | plastid | 58.96 | 67.19 |
VIT_07s0104g01440.t01 | Wine grape | plastid | 62.17 | 64.34 |
PGSC0003DMT400029528 | Potato | cytosol | 49.31 | 63.26 |
Solyc09g074630.2.1 | Tomato | cytosol | 49.46 | 63.21 |
KRH68133 | Soybean | cytosol, plastid | 60.49 | 62.8 |
KRH31912 | Soybean | cytosol | 60.03 | 62.42 |
KRG96392 | Soybean | plastid | 59.88 | 62.26 |
KRH71541 | Soybean | plastid | 60.03 | 62.22 |
CDX89922 | Canola | cytosol | 57.12 | 59.21 |
Bra033365.1-P | Field mustard | cytosol | 57.12 | 59.21 |
CDY18140 | Canola | cytosol | 56.81 | 58.89 |
AT1G03010.1 | Thale cress | cytosol | 57.12 | 58.83 |
CDY32492 | Canola | cytosol | 57.12 | 58.46 |
Bra032564.1-P | Field mustard | cytosol, plastid | 56.97 | 58.31 |
Bra029894.1-P | Field mustard | plastid | 55.59 | 56.19 |
CDY52208 | Canola | plastid | 55.28 | 55.88 |
CDX83030 | Canola | plastid | 45.02 | 54.95 |
AT2G47860.3 | Thale cress | plastid | 54.82 | 54.41 |
CDY37449 | Canola | cytosol | 39.97 | 53.7 |
TraesCS5D01G146000.1 | Wheat | plastid | 39.82 | 41.27 |
TraesCS4D01G255500.1 | Wheat | cytosol | 33.84 | 36.11 |
TraesCS5D01G385100.1 | Wheat | plastid | 33.84 | 34.75 |
TraesCS3D01G314000.1 | Wheat | cytosol | 34.46 | 34.51 |
TraesCS7D01G306400.1 | Wheat | cytosol | 33.23 | 33.75 |
TraesCS5D01G051100.1 | Wheat | cytosol | 32.01 | 33.07 |
TraesCS5D01G389200.2 | Wheat | cytosol, plastid | 32.47 | 32.77 |
TraesCS4D01G120400.1 | Wheat | cytosol, plastid | 28.18 | 32.22 |
TraesCS2D01G507400.1 | Wheat | nucleus | 26.34 | 31.27 |
TraesCS2D01G529600.1 | Wheat | cytosol | 30.32 | 30.46 |
TraesCS5D01G413400.1 | Wheat | cytosol | 31.09 | 30.16 |
TraesCS5D01G082800.1 | Wheat | cytosol | 27.26 | 28.62 |
TraesCS6D01G192300.1 | Wheat | cytosol | 27.26 | 28.39 |
TraesCS4D01G256700.1 | Wheat | cytosol | 26.03 | 28.05 |
TraesCS4D01G077700.3 | Wheat | cytosol | 26.8 | 27.6 |
TraesCS7D01G150700.2 | Wheat | cytosol | 26.8 | 26.76 |
TraesCS5D01G231300.1 | Wheat | cytosol | 26.03 | 26.69 |
TraesCS5D01G175800.1 | Wheat | cytosol | 23.43 | 26.33 |
Protein Annotations
EnsemblPlants:TraesCS5D01G463700.1 | EnsemblPlantsGene:TraesCS5D01G463700 | InterPro:IPR027356 | InterPro:NPH3_dom | InterPro:SKP1/BTB/POZ_sf | ncoils:Coil |
PANTHER:PTHR32370 | PANTHER:PTHR32370:SF30 | PFAM:PF03000 | PFscan:PS51649 | SEG:seg | SUPFAM:SSF54695 |
MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:507376545..507379169
Molecular Weight (calculated)
70857.5 Da
IEP (calculated)
9.196
GRAVY (calculated)
-0.123
Length
653 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVATVTEMK QSVSVSGKKM FRTSLNNRHA NEWPPTDVSS DLTVEVGTSS FALHKLLAQF PLVSRSGKIR RLVAEAKDAK LARLTLHATP GGAPAFELAA
101: KFCYGVHVDI TVANVAMLRC AARYLQMTDD FSDKNLELRA EAFLRDAVLP SIASSVAVLR TCEALLPAAE DVNLVARLIA AIANNVCKEQ LASGLLSRLD
201: HTGAQLKPAA LDSPGEGDWW GKSVAGLGLD LFQRLLSAVK SKGLRQETVT RILINYAHNS LYGLMPCRDA DKCGGVTDTD TDTDAVKKQR AVVETIVGLL
301: PAQSKKSPVP MAFLSGLLRT AMALSASNIC KADLEKRIGM QLEQAILEDI LIATGSGEAS TLYDTDVVAR IFSVFLNLDE DKEEDGGGFD YDSPRSPKQS
401: CIVKASKLLD SYLAEIALDS NLVPAKFISL AEILPDHARL VTDGIYRAVD IFLKVHPNIK EAERYRMCKA IDCQRLTPDA CSHAAQNERL PVQMAVQVLY
501: FEQIRLRSAI QSGGGGGHDG ALFFGGGAVS SASTVQGGGG NNMRSGSGVG SGAMSPRDNY ASVRRENREL KLEVSRMRMR LTDLEKDHVS MKRELVRVNP
601: ANRLLRSFAR SFGRLNTLFR MRPAAEPGLQ QLGAKATADA KVLFQRRRRH SIS
101: KFCYGVHVDI TVANVAMLRC AARYLQMTDD FSDKNLELRA EAFLRDAVLP SIASSVAVLR TCEALLPAAE DVNLVARLIA AIANNVCKEQ LASGLLSRLD
201: HTGAQLKPAA LDSPGEGDWW GKSVAGLGLD LFQRLLSAVK SKGLRQETVT RILINYAHNS LYGLMPCRDA DKCGGVTDTD TDTDAVKKQR AVVETIVGLL
301: PAQSKKSPVP MAFLSGLLRT AMALSASNIC KADLEKRIGM QLEQAILEDI LIATGSGEAS TLYDTDVVAR IFSVFLNLDE DKEEDGGGFD YDSPRSPKQS
401: CIVKASKLLD SYLAEIALDS NLVPAKFISL AEILPDHARL VTDGIYRAVD IFLKVHPNIK EAERYRMCKA IDCQRLTPDA CSHAAQNERL PVQMAVQVLY
501: FEQIRLRSAI QSGGGGGHDG ALFFGGGAVS SASTVQGGGG NNMRSGSGVG SGAMSPRDNY ASVRRENREL KLEVSRMRMR LTDLEKDHVS MKRELVRVNP
601: ANRLLRSFAR SFGRLNTLFR MRPAAEPGLQ QLGAKATADA KVLFQRRRRH SIS
001: MGVVTVPESN KQSVAAKRAF RPSSSIRHTP QWPVSDVTSD LTIEVGSATF SLHKVTKFNK LRRKKRNCFT QTRSLLQFPL VSRSGRIRKL VLESKDTNLN
101: LAAVPGGSES FELAAKFCYG VGVQYNSSNI AALRCVAHYL EMTEDLSEKN LEARTEAYLK DSIFNDISNS ITVLHSCERL LPVAEEINLV GRLVNAIAVN
201: ACKEQLASGL LKLDQSFSCG VPETAKPCDW WGRSLPILKL DFFQRVLSAM KSKGLNHDII SDILMSYARK SLQIIREPNL VKSDSDLQRK QRIVLEAVVG
301: LLPTQANKSS IPISFLSSLL KTAIGSGTSV SCRSDLERRI SHLLDQAILE DILIPANIGA MYDTDSVQRI FSMFLNLDEC EYRDDDDDEE DAVDESEMAM
401: YDFEGAESPK QSSIFKVSKL MDSYLAEVAL DSSLPPSKFI ALAELLPDHA RVVCDGLYRA VDIFLKVHPH MKDSERYRLC KTVSCKKLSQ DASSHAAQNE
501: RLPVQIAVQV LFYEQTRLKN AMTSGGGTGG SNQSQFFLFP NRSGSGMASG AISPRDNYAS VRRENRELRL EVARMRMRLT DLEKDHVSMK RDFVKPQSRR
601: RRYGMLRKLS RGLNKLNAIV LRFRSSQSVA SSGKKHTEEK TNSERRFMFQ KRRCHSVS
101: LAAVPGGSES FELAAKFCYG VGVQYNSSNI AALRCVAHYL EMTEDLSEKN LEARTEAYLK DSIFNDISNS ITVLHSCERL LPVAEEINLV GRLVNAIAVN
201: ACKEQLASGL LKLDQSFSCG VPETAKPCDW WGRSLPILKL DFFQRVLSAM KSKGLNHDII SDILMSYARK SLQIIREPNL VKSDSDLQRK QRIVLEAVVG
301: LLPTQANKSS IPISFLSSLL KTAIGSGTSV SCRSDLERRI SHLLDQAILE DILIPANIGA MYDTDSVQRI FSMFLNLDEC EYRDDDDDEE DAVDESEMAM
401: YDFEGAESPK QSSIFKVSKL MDSYLAEVAL DSSLPPSKFI ALAELLPDHA RVVCDGLYRA VDIFLKVHPH MKDSERYRLC KTVSCKKLSQ DASSHAAQNE
501: RLPVQIAVQV LFYEQTRLKN AMTSGGGTGG SNQSQFFLFP NRSGSGMASG AISPRDNYAS VRRENRELRL EVARMRMRLT DLEKDHVSMK RDFVKPQSRR
601: RRYGMLRKLS RGLNKLNAIV LRFRSSQSVA SSGKKHTEEK TNSERRFMFQ KRRCHSVS
Arabidopsis Description
Phototropic-responsive NPH3 family protein [Source:UniProtKB/TrEMBL;Acc:F4IM54]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.