Factsheet for TraesCS4D01G256700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G256600.1	Wheat	cytosol	98.35	98.51
TraesCS4A01G048200.1	Wheat	cytosol	98.02	98.02
HORVU4Hr1G069760.10	Barley	cytosol	97.03	96.08
OQU93039	Sorghum	cytosol	84.98	84.56
Os03t0205700-01	Rice	cytosol	84.32	84.46
Zm00001d048138_P007	Maize	cytosol	83.0	80.61
Zm00001d028075_P010	Maize	endoplasmic reticulum	82.51	61.96
GSMUA_Achr4P10900_001	Banana	cytosol	54.62	59.43
VIT_07s0129g00250.t01	Wine grape	cytosol	58.91	56.76
GSMUA_Achr10P...	Banana	cytosol	52.97	56.41
AT2G23050.1	Thale cress	cytosol	44.39	55.93
GSMUA_Achr7P26250_001	Banana	cytosol	57.43	55.77
VIT_03s0091g00680.t01	Wine grape	cytosol	57.43	55.77
Bra032187.1-P	Field mustard	cytosol	44.06	55.74
CDY38923	Canola	cytosol	43.23	55.04
KRH04439	Soybean	cytosol	57.1	55.01
CDX89539	Canola	cytosol	43.23	54.7
KRH58085	Soybean	cytosol	56.27	54.65
TraesCS4D01G077700.3	Wheat	cytosol	57.1	54.57
KRH35678	Soybean	cytosol	55.45	53.85
Solyc02g092480.2.1	Tomato	cytosol	55.78	53.82
KRH58082	Soybean	cytosol	55.45	53.5
PGSC0003DMT400064174	Potato	cytosol	55.45	53.5
CDX81462	Canola	cytosol	53.14	53.4
PGSC0003DMT400013928	Potato	cytosol	53.63	53.28
CDX81314	Canola	cytosol	46.2	53.23
TraesCS5D01G082800.1	Wheat	cytosol	54.46	53.05
Bra037846.1-P	Field mustard	cytosol	46.04	53.04
KRH04442	Soybean	cytosol	55.12	53.02
CDY37223	Canola	cytosol	52.64	52.9
CDY18660	Canola	cytosol	46.04	52.84
CDY50369	Canola	cytosol	44.55	52.63
Solyc01g107180.2.1	Tomato	cytosol	54.13	52.4
PGSC0003DMT400066161	Potato	cytosol	54.13	52.4
Solyc10g049660.1.1	Tomato	cytosol	52.64	52.21
PGSC0003DMT400038537	Potato	cytosol	53.63	51.83
Solyc03g044090.2.1	Tomato	cytosol	53.8	51.75
CDY44035	Canola	cytosol	48.84	51.48
AT2G14820.2	Thale cress	cytosol	53.8	51.42
Bra010603.1-P	Field mustard	cytosol	48.68	51.3
Bra039820.1-P	Field mustard	cytosol	52.81	51.04
AT4G37590.1	Thale cress	cytosol	48.68	50.86
KRG91101	Soybean	mitochondrion	52.64	50.63
CDY22422	Canola	cytosol	48.02	50.61
CDX72639	Canola	cytosol	47.85	50.17
CDY29566	Canola	cytosol	47.69	50.0
CDY69095	Canola	cytosol	46.2	49.91
Bra017837.1-P	Field mustard	cytosol	47.52	49.83
Bra012166.1-P	Field mustard	cytosol	46.2	49.73
AT5G67440.1	Thale cress	cytosol	47.36	49.57
CDY12846	Canola	cytosol	45.21	48.5
TraesCS5D01G231300.1	Wheat	cytosol	43.73	41.6
TraesCS7D01G150700.2	Wheat	cytosol	43.73	40.52
TraesCS5D01G175800.1	Wheat	cytosol	34.49	35.97
TraesCS6D01G192300.1	Wheat	cytosol	34.65	33.49
TraesCS7D01G306400.1	Wheat	cytosol	34.98	32.97
TraesCS5D01G385100.1	Wheat	plastid	33.5	31.92
TraesCS5D01G051100.1	Wheat	cytosol	33.17	31.8
TraesCS3D01G314000.1	Wheat	cytosol	33.5	31.14
TraesCS4D01G255500.1	Wheat	cytosol	30.03	29.74
TraesCS2D01G529600.1	Wheat	cytosol	30.36	28.31
TraesCS5D01G146000.1	Wheat	plastid	28.55	27.46
TraesCS5D01G413400.1	Wheat	cytosol	29.37	26.45
TraesCS5D01G463700.1	Wheat	plastid	28.05	26.03
TraesCS5D01G389200.2	Wheat	cytosol, plastid	27.23	25.5
TraesCS4D01G120400.1	Wheat	cytosol, plastid	23.1	24.52
TraesCS2D01G507400.1	Wheat	nucleus	21.78	24.0

Protein Annotations

EnsemblPlants:TraesCS4D01G256700.1	EnsemblPlantsGene:TraesCS4D01G256700	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR32370
PANTHER:PTHR32370:SF74	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	SEG:seg
SUPFAM:SSF54695	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:426518541..426522114

Molecular Weight (calculated)

66803.1 Da

IEP (calculated)

8.266

GRAVY (calculated)

-0.332

Length

606 amino acids

Sequence
(BLAST)

001: MKFMKLGSNP DTFQDDGSEV RIVETELVSD ITVRLGNTKF YLHKFPLLSK CARFQKLIPT TGDENIDIHI HDIPGGPKAF EICAKFCYGM VVTLNAYNVV
101: AARCAAEYLE MNETVDKGNL IYKIDVFLSS SIFRSWKDSI IVLGTTKAHL PWSEDLKLVS HCIDSIASKA SVDTSKVEWS YTYNRKKLST ENDLDMQWNG
201: VKKQPSVPKD WWVEDLTDLD IDSYKQVISA IKTMGMVPKD AVGEAIKAYT YKKLPSLSKV SMIHGDGKVR AMLVTITCLL PSEKGSVSCS FLLKLLRATN
301: LLKCGEMCRK ELVKRIGRQL DEASVSDLLI PTVDGETTGY DIDMILSIVE EYVRQDNKNT QKHNAEVNGH VQAPSTSMIT VAKVIDGYLT EVAKDPNTPV
401: LKFINLAEAI SGNSRPFHDG LYRAIDMYMK EHPSLSKSDK KKLCCLMDCK KLSPEACAHA VQNERLPLRT VVQVLYHEQT RASAAATVRA DSICIGSYES
501: SRSGATTNTE DEWDGVIGVE DLSLSSKTTK LEKCHNAEKS HGSSKSTANG KAKGGATPKK VLGKMLSSKA LTGERSSSDS SDSAILRSQD HPKRTPSRST
601: KPSAAA

Best Arabidopsis Sequence Match ( AT2G14820.1 )
(BLAST)

001: MKFMKIGSKL DSFKTDGNNV RYVENELASD ISVDVEGSRF CLHKFPLLSK CACLQKLLSS TDKNNIDDID ISGIPGGPTA FETCAKFCYG MTVTLSAYNV
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS

Arabidopsis Description

NPY2BTB/POZ domain-containing protein NPY2 [Source:UniProtKB/Swiss-Prot;Acc:O80970]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.