CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048138_P007	Maize	cytosol	94.58	92.31
Os03t0205700-01	Rice	cytosol	85.22	85.79
HORVU4Hr1G069760.10	Barley	cytosol	85.88	85.46
TraesCS4B01G256600.1	Wheat	cytosol	84.89	85.45
TraesCS4A01G048200.1	Wheat	cytosol	84.89	85.31
TraesCS4D01G256700.1	Wheat	cytosol	84.56	84.98
Zm00001d028075_P010	Maize	endoplasmic reticulum	93.76	70.76
GSMUA_Achr4P10900_001	Banana	cytosol	55.5	60.68
VIT_07s0129g00250.t01	Wine grape	cytosol	60.1	58.19
Bra032187.1-P	Field mustard	cytosol	44.99	57.2
VIT_03s0091g00680.t01	Wine grape	cytosol	58.29	56.89
KRH35678	Soybean	cytosol	58.13	56.73
CDY38923	Canola	cytosol	44.17	56.51
CDX89539	Canola	cytosol	44.34	56.37
AT2G23050.1	Thale cress	cytosol	44.34	56.13
KRH04439	Soybean	cytosol	57.8	55.96
GSMUA_Achr10P...	Banana	cytosol	51.89	55.54
PGSC0003DMT400013928	Potato	cytosol	55.5	55.41
GSMUA_Achr7P26250_001	Banana	cytosol	56.65	55.29
KRH58085	Soybean	cytosol	56.65	55.29
PGSC0003DMT400066161	Potato	cytosol	56.32	54.79
Solyc10g049660.1.1	Tomato	cytosol	54.84	54.66
Solyc01g107180.2.1	Tomato	cytosol	55.99	54.47
EER91236	Sorghum	cytosol	56.49	54.34
Solyc02g092480.2.1	Tomato	cytosol	55.66	53.98
KRH04442	Soybean	cytosol	55.83	53.97
KRH58082	Soybean	cytosol	55.5	53.82
PGSC0003DMT400064174	Potato	cytosol	55.17	53.5
CDX81462	Canola	cytosol	52.87	53.4
KRG91101	Soybean	mitochondrion	55.17	53.33
CDY37223	Canola	cytosol	52.38	52.9
CDX81314	Canola	cytosol	45.65	52.85
CDY50369	Canola	cytosol	44.5	52.83
Bra037846.1-P	Field mustard	cytosol	45.48	52.66
CDY18660	Canola	cytosol	45.48	52.46
Solyc03g044090.2.1	Tomato	cytosol	53.86	52.06
PGSC0003DMT400038537	Potato	cytosol	53.37	51.83
CDY44035	Canola	cytosol	48.93	51.83
OQU79444	Sorghum	cytosol	54.68	51.71
Bra010603.1-P	Field mustard	cytosol	48.77	51.65
CDY22422	Canola	cytosol	48.6	51.48
Bra039820.1-P	Field mustard	cytosol	52.71	51.2
AT2G14820.2	Thale cress	cytosol	53.04	50.95
AT4G37590.1	Thale cress	cytosol	48.44	50.86
CDY29566	Canola	cytosol	48.11	50.69
Bra017837.1-P	Field mustard	cytosol	47.95	50.52
CDX72639	Canola	cytosol	47.95	50.52
CDY69095	Canola	cytosol	45.98	49.91
Bra012166.1-P	Field mustard	cytosol	45.98	49.73
AT5G67440.1	Thale cress	cytosol	46.8	49.22
CDY12846	Canola	cytosol	45.32	48.85
EER89339	Sorghum	cytosol	44.5	42.68
EER98911	Sorghum	cytosol	43.19	42.49
KXG35200	Sorghum	cytosol	34.32	36.16
EES05363	Sorghum	cytosol, nucleus, plastid	35.96	34.06
EES03716	Sorghum	cytosol	35.14	32.87
EER91175	Sorghum	cytosol	33.33	32.17
EES10995	Sorghum	mitochondrion	33.83	31.5
EES14497	Sorghum	cytosol	33.99	31.46
EES11510	Sorghum	cytosol	31.69	30.35
KXG25806	Sorghum	cytosol	32.02	29.82
EES07014	Sorghum	nucleus	37.11	29.24
KXG39906	Sorghum	cytosol	29.06	28.78
EES16593	Sorghum	plastid	29.56	27.95
EER93390	Sorghum	cytosol	29.23	26.33
OQU91026	Sorghum	cytosol, nucleus, plastid	25.78	26.25
OQU92601	Sorghum	plastid	28.08	25.87
OQU82741	Sorghum	plastid	23.32	23.59
KXG22914	Sorghum	plastid	24.14	20.59

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8081864	InterPro:BTB/POZ_dom	UniProt:C5WTR8	ProteinID:EER95309.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356	ProteinID:KXG39914.1
InterPro:NPH3_dom	EnsemblPlants:OQU93039	ProteinID:OQU93039	ProteinID:OQU93039.1	PFAM:PF00651	PFAM:PF03000
PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF74	InterPro:SKP1/BTB/POZ_sf	EnsemblPlantsGene:SORBI_3001G464000
SUPFAM:SSF54695	unigene:Sbi.9136	UniParc:UPI0001A8346A	RefSeq:XP_002468311.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:73800486..73806419

Molecular Weight (calculated)

66808.1 Da

IEP (calculated)

8.239

GRAVY (calculated)

-0.256

Length

609 amino acids

Sequence
(BLAST)

001: MKFMKLGSNP DTFQDDGNEV SIAASELVSD ITVRIGTTKF YLHKFPLLSK CARFQKLIPT TGDENIEIHI HDIPGGAKAF EICAKFCYGM IVTLNAYNVI
101: AARCAAEYLE MNETVDKGNL IYKIDIFLSS SIFRSWKDSI IVLGTTKAHL PWAEDLKLVS HCIDSVASKA SIDVSKVEWS YTYNRKKLPT ENGHDSPWNG
201: VKQQQFVPKD WWVEDLTDLD IDAYKQVITA IKTKGMVPKD VIGEAIKAYT YKKLPSLSKV SMIHGDAKVR AMLVTITCLL PSEKGSVSCS FLLKLLKATN
301: LLKCGEMCRK ELMKRIARQL EEASVSDLLI PTVDGDTTVY DIDLILSIVE EFVRQDSKNA QRHNGGEVND HVSAPSASMI TVAKIVDGYL AEVAKDPNIP
401: VYKFFSLAET VSANSRPVHD GLYRAIDMYL KEHPGLGKSD KKRLCALMDC KKLSPDACAH AVQNERLPLR IVVQVLYHEQ TRASAAATIR ADSIGIGSYE
501: SSRSGATTNT EDEWDGVMAV EDLSLSKTTK LDKCHTASTI VEKNHGGNKG ANGRVKGGAT SKKALGKIMS SKGQTGERSS SDSSDSAILP SQEHPKRTPA
601: RSTTKSAAA

Best Arabidopsis Sequence Match ( AT2G14820.1 )
(BLAST)

001: MKFMKIGSKL DSFKTDGNNV RYVENELASD ISVDVEGSRF CLHKFPLLSK CACLQKLLSS TDKNNIDDID ISGIPGGPTA FETCAKFCYG MTVTLSAYNV
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS

Arabidopsis Description

NPY2BTB/POZ domain-containing protein NPY2 [Source:UniProtKB/Swiss-Prot;Acc:O80970]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.