CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047483_P002	Maize	plastid	95.16	97.22
Os03t0347700-01	Rice	mitochondrion, plastid	86.69	85.39
TraesCS5D01G463700.1	Wheat	plastid	83.66	84.69
TraesCS7A01G184200.2	Wheat	plastid	84.87	83.98
HORVU1Hr1G055870.1	Barley	plastid	83.36	82.86
TraesCS5B01G461900.4	Wheat	plastid	80.79	81.28
GSMUA_Achr8P30170_001	Banana	plastid	58.55	69.35
GSMUA_Achr1P11260_001	Banana	plastid	59.46	68.59
VIT_07s0104g01440.t01	Wine grape	plastid	61.27	64.18
KRH31912	Soybean	cytosol	60.51	63.69
PGSC0003DMT400029528	Potato	cytosol	48.71	63.26
Solyc09g074630.2.1	Tomato	cytosol	48.87	63.21
KRH68133	Soybean	cytosol, plastid	60.06	63.12
KRH71541	Soybean	plastid	60.06	63.02
KRG96392	Soybean	plastid	59.46	62.58
CDX89922	Canola	cytosol	55.52	58.25
Bra033365.1-P	Field mustard	cytosol	55.52	58.25
AT1G03010.1	Thale cress	cytosol	55.82	58.2
CDY18140	Canola	cytosol	55.07	57.78
Bra032564.1-P	Field mustard	cytosol, plastid	55.07	57.05
CDY32492	Canola	cytosol	55.07	57.05
Bra029894.1-P	Field mustard	plastid	55.52	56.81
CDY52208	Canola	plastid	55.22	56.5
CDX83030	Canola	plastid	44.78	55.33
AT2G47860.3	Thale cress	plastid	54.92	55.17
CDY37449	Canola	cytosol	38.58	52.47
EES16593	Sorghum	plastid	38.43	39.44
KXG39906	Sorghum	cytosol	32.68	35.12
EER91175	Sorghum	cytosol	31.92	33.44
OQU91026	Sorghum	cytosol, nucleus, plastid	30.11	33.28
EES03716	Sorghum	cytosol	32.53	33.03
EES14497	Sorghum	cytosol	32.68	32.83
OQU82741	Sorghum	plastid	29.5	32.39
KXG25806	Sorghum	cytosol	31.92	32.26
EES11510	Sorghum	cytosol	29.5	30.66
EER93390	Sorghum	cytosol	30.56	29.88
EER98911	Sorghum	cytosol	26.63	28.43
OQU93039	Sorghum	cytosol	25.87	28.08
EER91236	Sorghum	cytosol	26.32	27.49
OQU79444	Sorghum	cytosol	26.78	27.48
EES10995	Sorghum	mitochondrion	27.08	27.37
EES07014	Sorghum	nucleus	31.62	27.04
EER89339	Sorghum	cytosol	25.87	26.93
EES05363	Sorghum	cytosol, nucleus, plastid	26.17	26.91
KXG22914	Sorghum	plastid	29.05	26.89
KXG35200	Sorghum	cytosol	23.15	26.47

Protein Annotations

EnsemblPlants:OQU92601	EnsemblPlantsGene:SORBI_3001G373500	EntrezGene:8082296	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf
ncoils:Coil	PANTHER:PTHR32370	PANTHER:PTHR32370:SF30	PFAM:PF03000	PFscan:PS51649	ProteinID:OQU92601
ProteinID:OQU92601.1	ProteinID:OQU92602.1	RefSeq:XP_002465279.1	SEG:seg	SUPFAM:SSF54695	UniParc:UPI0001A82260
UniProt:A0A1Z5S9K7	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:66137755..66141050

Molecular Weight (calculated)

71061.8 Da

IEP (calculated)

9.447

GRAVY (calculated)

-0.012

Length

661 amino acids

Sequence
(BLAST)

001: MGVATVTELK QSISGKRTFR PSLISRHANE WPPTDVSSDL TVEVGTSSFA LHKLFAQFPL VSRSGKIRRL VAEAKDAKLA RLSLHGTPGG APAFELAAKF
101: CYGVHVDVTV ANVAMLRCAA HYLQITDDFS DKSLELRAES FLRDAVLPSI ASSVAVLRSC EALLPAAEDV GLVPRLIAAI ATNVCKEQLT SGLSKLDQCA
201: AQLKPAAAFA ADLDSPGPGD WWGKSVAALG LDFFQRLLSA VKAKGLKQET VTRILINYAQ NSLHGLMARD VHRCGAADAD AVKKQRAVVE AIVGLLPAQS
301: KKSPVPMAFL SGLLKTAMAV SASSICRADL EKRIGMQLDQ AILEDILIAA GAGAGAATPA GHGQQHALYD TDVVARIFSV FLNLDDDHNE EDAAAFDYDS
401: PRSPKQSLLV KAAKLLDSYL AEVALDSNIL PSKFISLAEL LPDHARVVTD GLYRAVDIFL KVHPNIKEAE RYRLCKAIDC QRLTPDACSH AAQNERLPVQ
501: MAVQVLYFEQ LRLRSAIQAS GGGGSMGGHD AALFFGCAAA AAASSVSVQG SVNMRSGSGV GSGAMSPRDN YASVRRENRE LKLEVARMRM RLTDLEKDHV
601: SMKRELVRVG PANRLLRGFA RSLSRLFRMR PAAEPGLQQL GAKATADAKV LFQRRRRHSI S

Best Arabidopsis Sequence Match ( AT1G03010.1 )
(BLAST)

001: MGLVTVGELK PAFTGKRGFR LNSTIRHASE WPISDVSSDL TVQVGSSSFC LHKFPLVSRS GKIRKLLADP KISNVCLSNA PGGSEAFELA AKFCYGINIE
101: INLLNIAKLR CASHYLEMTE DFSEENLASK TEHFLKETIF PSILNSIIVL HHCETLIPVS EDLNLVNRLI IAVANNACKE QLTSGLLKLD YSFSGTNIEP
201: QTPLDWWGKS LAVLNLDFFQ RVISAVKSKG LIQDVISKIL ISYTNKSLQG LIVRDPKLEK ERVLDSEGKK KQRLIVETIV RLLPTQGRRS SVPMAFLSSL
301: LKMVIATSSS ASTGSCRSDL ERRIGLQLDQ AILEDVLIPI NLNGTNNTMY DIDSILRIFS IFLNLDEDDE EEEHHHLQFR DETEMIYDFD SPGSPKQSSI
401: LKVSKLMDNY LAEIAMDPNL TTSKFIALAE LLPDHARIIS DGLYRAVDIY LKVHPNIKDS ERYRLCKTID SQKLSQEACS HAAQNERLPV QMAVQVLYFE
501: QIRLRNAMSS SIGPTQFLFN SNCHQFPQRS GSGAGSGAIS PRDNYASVRR ENRELKLEVA RMRMRLTDLE KDHISIKQEL VKSNPGTKLF KSFAKKISKL
601: NSLFSFSSLK PSLSGKASSE SRFLFQRKRR HSVS

Arabidopsis Description

BTB/POZ domain-containing protein At1g03010 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA69]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.