Factsheet for Bra033365.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89922	Canola	cytosol	99.84	99.84
Bra032564.1-P	Field mustard	cytosol, plastid	93.02	91.85
AT1G03010.1	Thale cress	cytosol	90.63	90.06
VIT_07s0104g01440.t01	Wine grape	plastid	73.49	73.38
KRH71541	Soybean	plastid	72.7	72.7
KRH31912	Soybean	cytosol	72.22	72.45
Solyc09g074630.2.1	Tomato	cytosol	58.57	72.21
PGSC0003DMT400029528	Potato	cytosol	58.25	72.1
KRH68133	Soybean	cytosol, plastid	71.27	71.38
KRG96392	Soybean	plastid	70.48	70.7
GSMUA_Achr8P30170_001	Banana	plastid	59.05	66.67
GSMUA_Achr1P11260_001	Banana	plastid	59.37	65.27
Bra029894.1-P	Field mustard	plastid	62.22	60.68
TraesCS5D01G463700.1	Wheat	plastid	59.21	57.12
Zm00001d047483_P002	Maize	plastid	57.46	55.95
HORVU1Hr1G055870.1	Barley	plastid	59.05	55.94
TraesCS7A01G184200.2	Wheat	plastid	59.21	55.84
OQU92601	Sorghum	plastid	58.25	55.52
Os03t0347700-01	Rice	mitochondrion, plastid	58.57	54.99
TraesCS5B01G461900.4	Wheat	plastid	57.14	54.79
Bra001349.1-P	Field mustard	plastid	39.84	43.05
Bra037460.1-P	Field mustard	cytosol	42.06	42.74
Bra012158.1-P	Field mustard	cytosol	39.37	41.26
Bra032401.1-P	Field mustard	cytosol	39.52	41.02
Bra031830.1-P	Field mustard	cytosol	33.33	38.04
Bra036043.1-P	Field mustard	cytosol	31.9	36.68
Bra018309.1-P	Field mustard	cytosol, plastid	33.97	36.21
Bra022805.1-P	Field mustard	cytosol	32.86	36.0
Bra005737.1-P	Field mustard	cytosol	31.11	33.33
Bra032187.1-P	Field mustard	cytosol	24.92	32.78
Bra012166.1-P	Field mustard	cytosol	28.89	32.33
Bra010771.1-P	Field mustard	cytosol, mitochondrion, nucleus	33.49	32.16
Bra037846.1-P	Field mustard	cytosol	26.51	31.75
Bra017837.1-P	Field mustard	cytosol	29.05	31.66
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	33.17	31.62
Bra010603.1-P	Field mustard	cytosol	28.57	31.3
Bra039820.1-P	Field mustard	cytosol	30.95	31.1
Bra036858.1-P	Field mustard	cytosol	28.1	30.84
Bra025208.1-P	Field mustard	cytosol	27.62	30.31
Bra011301.1-P	Field mustard	cytosol	27.62	30.16
Bra008815.1-P	Field mustard	cytosol	29.05	30.15
Bra012082.1-P	Field mustard	cytosol	31.9	30.04
Bra009047.1-P	Field mustard	cytosol	29.37	29.37
Bra004064.1-P	Field mustard	cytosol	29.21	29.25
Bra024285.1-P	Field mustard	cytosol	33.49	29.1
Bra023423.1-P	Field mustard	cytosol	25.24	28.8
Bra025440.1-P	Field mustard	cytosol	26.19	28.8
Bra037773.1-P	Field mustard	cytosol	33.49	28.63
Bra037606.1-P	Field mustard	cytosol	27.94	27.46
Bra024915.1-P	Field mustard	cytosol	24.13	27.09
Bra010770.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra033365	EnsemblPlants:Bra033365.1	EnsemblPlants:Bra033365.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356
UniProt:M4EX30	InterPro:NPH3_dom	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370
PANTHER:PTHR32370:SF30	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI0002544BD8	SEG:seg

Description

AT1G03010 (E=2e-301) | phototropic-responsive NPH3 family protein

Coordinates

chrA10:-:4049711..4052719

Molecular Weight (calculated)

70864.3 Da

IEP (calculated)

8.990

GRAVY (calculated)

-0.245

Length

630 amino acids

Sequence
(BLAST)

001: MGLVTVGELK PTFTGKRGFR LNSSIRHASE WPISDVSSDL TVQVGSSSFC LHKFPLVSRS GKIRKLLTDS KTFSISLPSV PGGAEAFELA AKFCYGINIE
101: INLLNVAKLR CASHYLEMTE EFSEENLAIK TEHFFKETIL PSISNSILAL HHCEALVPVS EDLNLVNRLV IAIANNACKE QLTSGLLKLD YTFSGANIEP
201: ETPLDWWGKS LAVLNLDFFQ RVVSAVKSKG LRQDVISKIL ISYTNKSLQG LIIRDPKLDK ERVIDLESKK KQRMIVETIV RLLPTQGRRS SVPMAFLSSL
301: LKMVIATSSG SCRSELERRI GLQLDQAILE DVLIPTNLNG NNNTMYDTDS ILRIFSIFLN LDEEDDDEEQ DQHHRNRFGD ETEMIYDFDS PKQSSILKVS
401: KLMDNYLAEI ALDPNLTTSK FIALAELLPD HARIISDGLY RAVDIYLKVH PNIKDSERYR LCKTIDSQKL SQEACSHAAQ NERLPVQMAV QVLYFEQIRL
501: RNAMSSSIGS TQFLFSGNCH QFPQRAGSGA GSGAISPRDN YASVRRENRE LKLEVARMRM RLTDLEKDHI SIKQELVKSN PGTKLFKSFA KKISKLNSLF
601: SFSSLKPSLS AKASTDSRFL FQRKRRHSVS

Best Arabidopsis Sequence Match ( AT1G03010.1 )
(BLAST)

001: MGLVTVGELK PAFTGKRGFR LNSTIRHASE WPISDVSSDL TVQVGSSSFC LHKFPLVSRS GKIRKLLADP KISNVCLSNA PGGSEAFELA AKFCYGINIE
101: INLLNIAKLR CASHYLEMTE DFSEENLASK TEHFLKETIF PSILNSIIVL HHCETLIPVS EDLNLVNRLI IAVANNACKE QLTSGLLKLD YSFSGTNIEP
201: QTPLDWWGKS LAVLNLDFFQ RVISAVKSKG LIQDVISKIL ISYTNKSLQG LIVRDPKLEK ERVLDSEGKK KQRLIVETIV RLLPTQGRRS SVPMAFLSSL
301: LKMVIATSSS ASTGSCRSDL ERRIGLQLDQ AILEDVLIPI NLNGTNNTMY DIDSILRIFS IFLNLDEDDE EEEHHHLQFR DETEMIYDFD SPGSPKQSSI
401: LKVSKLMDNY LAEIAMDPNL TTSKFIALAE LLPDHARIIS DGLYRAVDIY LKVHPNIKDS ERYRLCKTID SQKLSQEACS HAAQNERLPV QMAVQVLYFE
501: QIRLRNAMSS SIGPTQFLFN SNCHQFPQRS GSGAGSGAIS PRDNYASVRR ENRELKLEVA RMRMRLTDLE KDHISIKQEL VKSNPGTKLF KSFAKKISKL
601: NSLFSFSSLK PSLSGKASSE SRFLFQRKRR HSVS

Arabidopsis Description

BTB/POZ domain-containing protein At1g03010 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA69]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.