Factsheet for GSMUA_Achr6P30010_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 2
plasma membrane 1
nucleus 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P26110_001	Banana	cytosol	81.02	73.27
GSMUA_Achr5P02440_001	Banana	cytosol	71.35	68.24
GSMUA_Achr4P31620_001	Banana	cytosol	71.35	65.49
VIT_10s0003g04490.t01	Wine grape	cytosol	72.99	63.29
Solyc02g021640.2.1	Tomato	nucleus	70.99	61.84
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	70.8	61.69
EER91175	Sorghum	cytosol	70.8	61.49
KRH12771	Soybean	cytosol	72.08	61.43
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	70.07	61.05
KRH37734	Soybean	cytosol	71.17	60.65
GSMUA_Achr5P00550_001	Banana	cytosol	67.7	58.98
HORVU5Hr1G093120.2	Barley	cytosol	67.52	58.36
TraesCS5D01G385100.1	Wheat	plastid	67.52	58.18
TraesCS5A01G042600.1	Wheat	cytosol	64.6	55.92
TraesCS5A01G375500.3	Wheat	peroxisome	65.69	55.9
TraesCS5D01G051100.1	Wheat	cytosol	64.42	55.85
TraesCS5B01G377600.1	Wheat	cytosol	68.07	55.01
Os12t0613250-00	Rice	plasma membrane	64.96	54.77
CDX90249	Canola	cytosol, mitochondrion, nucleus	61.5	53.41
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	64.42	53.4
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	64.78	53.38
CDY02293	Canola	cytosol, mitochondrion, nucleus	64.05	53.26
CDY09586	Canola	cytosol	63.69	53.2
TraesCS5B01G046200.2	Wheat	mitochondrion	62.04	52.96
CDY27653	Canola	cytosol	59.67	52.91
CDX99692	Canola	cytosol, mitochondrion, nucleus	60.4	51.32
Bra025440.1-P	Field mustard	cytosol	53.28	50.96
GSMUA_AchrUn_...	Banana	cytosol	39.23	50.59
GSMUA_Achr2P02890_001	Banana	cytosol	52.01	50.53
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	46.35	50.3
HORVU5Hr1G010370.2	Barley	plastid	64.42	44.74
GSMUA_Achr9P26440_001	Banana	cytosol	46.53	43.81
GSMUA_Achr4P01950_001	Banana	cytosol	30.29	40.69
GSMUA_Achr8P04840_001	Banana	cytosol	43.61	40.65
GSMUA_Achr3P20380_001	Banana	cytosol	41.42	39.48
GSMUA_Achr10P...	Banana	cytosol	38.14	37.79
GSMUA_Achr4P10900_001	Banana	cytosol	37.04	36.45
GSMUA_Achr6P27970_001	Banana	cytosol	34.31	36.36
GSMUA_Achr5P01710_001	Banana	cytosol	36.31	34.25
GSMUA_Achr10P...	Banana	cytosol	35.4	34.09
GSMUA_Achr7P21950_001	Banana	plastid	33.94	33.04
GSMUA_Achr7P26250_001	Banana	cytosol	37.59	33.01
GSMUA_Achr8P16390_001	Banana	cytosol	31.39	32.95
GSMUA_Achr1P21440_001	Banana	cytosol	36.5	32.89
GSMUA_Achr3P04740_001	Banana	cytosol	35.4	32.88
GSMUA_Achr10P...	Banana	cytosol	33.58	32.68
GSMUA_Achr8P30170_001	Banana	plastid	32.48	31.9
GSMUA_Achr7P26300_001	Banana	cytosol	34.12	31.59
GSMUA_Achr2P13430_001	Banana	cytosol	38.32	31.3
GSMUA_Achr1P11260_001	Banana	plastid	32.66	31.24
GSMUA_Achr3P12020_001	Banana	cytosol	30.66	30.77
GSMUA_Achr11P...	Banana	cytosol, plastid	31.2	29.53
GSMUA_Achr3P14590_001	Banana	cytosol	30.29	28.97
GSMUA_Achr5P29690_001	Banana	cytosol, plastid	31.57	28.83
CDY12056	Canola	plasma membrane	61.68	20.94
GSMUA_Achr3P25690_001	Banana	nucleus	40.88	18.76
Os12t0613300-02	Rice	nucleus	1.46	2.69

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr6G30010_001	EnsemblPlants:GSMUA_Achr6P30010_001	EnsemblPlants:GSMUA_Achr6T30010_001	InterPro:IPR000210	InterPro:IPR027356
UniProt:M0TBE6	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF12	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI000295427F

Description

BTB/POZ domain-containing protein At1g30440 [Source:GMGC_GENE;Acc:GSMUA_Achr6G30010_001]

Coordinates

chr6:+:30129946..30139554

Molecular Weight (calculated)

61927.5 Da

IEP (calculated)

7.270

GRAVY (calculated)

-0.149

Length

548 amino acids

Sequence
(BLAST)

001: MACKKLGSKA DVFHRRGQAW FCTTGLPSDI IIEVGEMAFH LHKFPLLSKS ALLEKLIEEI SDEQEGCVVK LDDLPGGSKA FELVARFCYG VKFELTASNV
101: VCLHYAAEHL QMTEEIAEGN LITQTKIFIN QVVIRSWKDS IKALVMCNNL LPHAENLQII KRCLDSLAVK ACTDPNLFAR PRNCSSDWWY EDVSSLSLPL
201: YKKLISVMES RGIRQEVIAG SMTFYAKRYL PGISRHHCMA SVALTAAPSE EEQRQLLEEI ASMLPLQKGV ISTKVLFGLL RTGMILQVKP SCISDLEKRI
301: GLQLDQATLE DLLLPNFSYS METLYNVDCV QQILEHFLAM LIDGYLAEIA PDVNLKLPKF QNLAGAVPDY ARPLDDGLYR AIDIYLKAHP WLTEADREQL
401: CRLMDCQKLS LEACTHAAQN ERLPLRLVVQ VLFFEQLQLR TSIAGDAGGW ASTVRQNHVL KEGMDNMRMR VSELEKECMS MRQEIEKLGR GNSRWSSVPK
501: RFGFTIKSQM CSAQEESVGD HCRNRMNIKT EKFPEKLMKH KKQSSAGS

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.