CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73781	Canola	cytosol	93.43	93.94
Bra036858.1-P	Field mustard	cytosol	97.81	93.38
AT3G50840.1	Thale cress	cytosol	70.44	67.84
CDY45241	Canola	cytosol	65.33	59.87
CDY30765	Canola	cytosol	66.79	57.73
KRH28552	Soybean	cytosol	54.93	50.84
KRH08351	Soybean	cytosol	59.31	50.15
VIT_00s0207g00230.t01	Wine grape	cytosol	58.03	50.08
Solyc02g090070.2.1	Tomato	nucleus	58.39	49.16
PGSC0003DMT400026008	Potato	cytosol	58.76	48.86
GSMUA_Achr9P26440_001	Banana	cytosol	50.73	47.77
KRH69999	Soybean	endoplasmic reticulum	58.39	47.06
KRH76914	Soybean	cytosol	43.61	46.86
GSMUA_Achr8P04840_001	Banana	cytosol	48.36	45.07
HORVU5Hr1G093880.1	Barley	cytosol	31.2	41.11
OQU91026	Sorghum	cytosol, nucleus, plastid	43.8	40.13
Zm00001d033941_P001	Maize	mitochondrion, plastid	45.44	39.46
TraesCS5D01G389200.2	Wheat	cytosol, plastid	46.53	39.41
EER93390	Sorghum	cytosol	48.54	39.35
TraesCS5A01G403400.1	Wheat	cytosol	48.18	39.05
TraesCS5B01G408200.1	Wheat	cytosol	47.99	39.02
TraesCS5A01G379300.1	Wheat	cytosol, plastid	46.35	39.02
Os03t0767600-01	Rice	cytosol	48.54	38.95
TraesCS5D01G413400.1	Wheat	cytosol	47.81	38.93
Os03t0738900-00	Rice	nucleus, plasma membrane, plastid	46.17	38.57
TraesCS5B01G383100.1	Wheat	plastid	45.8	38.38
HORVU5Hr1G098170.1	Barley	cytosol, mitochondrion	47.81	38.25
HORVU5Hr1G093850.15	Barley	mitochondrion	45.62	38.11
CDY27653	Canola	cytosol	42.52	37.7
Zm00001d013182_P003	Maize	cytosol, mitochondrion	48.18	37.55
TraesCS2D01G507400.1	Wheat	nucleus	37.59	37.45
TraesCS1B01G298700.1	Wheat	cytosol, plastid	28.28	37.44
CDY10395	Canola	cytosol	37.04	37.38
CDX70320	Canola	cytosol	38.5	36.89
CDX90249	Canola	cytosol, mitochondrion, nucleus	41.97	36.45
CDY09586	Canola	cytosol	43.61	36.43
CDY02293	Canola	cytosol, mitochondrion, nucleus	43.8	36.42
CDX99692	Canola	cytosol, mitochondrion, nucleus	41.79	35.5
CDX80858	Canola	cytosol	37.77	35.2
CDY11245	Canola	cytosol	37.77	34.62
CDX85639	Canola	cytosol	36.13	34.62
CDY09812	Canola	cytosol	37.96	34.21
CDX69627	Canola	cytosol	37.77	34.1
CDY72267	Canola	cytosol	30.84	33.4
CDY72257	Canola	cytosol	30.66	33.2
CDY68489	Canola	cytosol, plastid	27.19	33.18
CDY72506	Canola	cytosol	7.48	32.28
CDY12846	Canola	cytosol	32.12	31.15
CDX81314	Canola	cytosol	29.38	30.61
CDY69095	Canola	cytosol	31.2	30.48
CDY29723	Canola	cytosol	38.5	30.27
CDY18660	Canola	cytosol	29.01	30.11
CDY23992	Canola	cytosol	31.02	30.09
CDX86278	Canola	cytosol	33.76	29.84
CDX85365	Canola	cytosol	33.76	29.84
CDX84827	Canola	cytosol	30.66	29.73
CDY37857	Canola	cytosol	32.48	29.67
CDX89539	Canola	cytosol	25.91	29.65
CDY10743	Canola	cytosol	31.39	29.6
CDY20341	Canola	cytosol	38.32	29.58
CDY38923	Canola	cytosol	25.55	29.41
CDY57436	Canola	cytosol	32.3	29.35
CDY02075	Canola	cytosol	30.84	29.14
CDY30615	Canola	cytosol	26.46	29.06
CDY12841	Canola	cytosol	31.93	29.02
CDY57361	Canola	cytosol	26.28	28.86
CDY09561	Canola	cytosol	31.57	28.64
CDX73937	Canola	plastid	30.47	28.6
CDY00659	Canola	plastid	30.47	28.55
CDX83620	Canola	cytosol	28.47	28.52
CDX81462	Canola	cytosol	31.2	28.36
CDY02305	Canola	cytosol	31.39	28.34
CDX89922	Canola	cytosol	32.3	28.1
CDY37223	Canola	cytosol	30.84	28.03
CDY44035	Canola	cytosol	29.38	28.0
CDY22422	Canola	cytosol	29.38	28.0
CDY18140	Canola	cytosol	32.12	27.94
CDY50369	Canola	cytosol	26.09	27.88
CDX84515	Canola	cytosol	36.86	27.82
CDY52208	Canola	plastid	32.66	27.71
CDX72639	Canola	cytosol	29.2	27.68
CDY13635	Canola	cytosol	28.83	27.53
CDY18715	Canola	cytosol	36.31	27.49
CDY32492	Canola	cytosol	31.75	27.27
CDY29566	Canola	cytosol	28.65	27.16
CDX81221	Canola	cytosol	35.77	26.85
CDY37449	Canola	cytosol	23.72	26.75
CDX68790	Canola	cytosol	27.92	26.75
CDX75198	Canola	cytosol	27.74	26.34
CDX96986	Canola	cytosol	29.38	25.72
CDX69851	Canola	cytosol	29.38	25.56
CDX83030	Canola	plastid	24.64	25.23
CDY17704	Canola	cytosol	25.73	25.13
CDX77798	Canola	cytosol	25.73	25.13
GSMUA_Achr3P25690_001	Banana	nucleus	43.61	20.02
CDY12056	Canola	plasma membrane	42.15	14.31

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlants:CDX77951	ProteinID:CDX77951	ProteinID:CDX77951.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00129213001	InterPro:IPR000210	InterPro:IPR027356
InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370
PANTHER:PTHR32370:SF8	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniPathway:UPA00143	UniParc:UPI0004EE7BB1
SEG:seg	:	:	:	:	:

Description

BnaA09g31460D

Coordinates

chrLK031814:-:260575..262611

Molecular Weight (calculated)

61524.1 Da

IEP (calculated)

6.124

GRAVY (calculated)

-0.157

Length

548 amino acids

Sequence
(BLAST)

001: MGAEKQSSKG QAWFCTTGLS SDMEIEVDDM TYHLNKFLLM SKSRKLHQLI TEQGQNGYTL HIKLENFPGG PEIFEMVVKV CYGVKVNLSA STAVLLRCAA
101: EELEMTEEYS PDNLILKTEN FLSHSVLSNT QETIAALKAC EPVTSLAESI GITKQCIDSI VSIASSSADP SLKVLSEDLL ELSFPIFKRV VQAMKAKDLS
201: DNIVEISLIR YAKKHIPLIT SRSSSSSTIA SENQQRELLE TIISYLPVHN SSATSTTRSL FGLLRSAIIL NTSEKCRTVL EKKIGSHLEK ATLDDLLIPS
301: YSYLNETLYD IDLVERLIRH FLQNDAVSFL SSPSLTVVGK LIDGALCEIA SDANLKPERF YSLAVSLPDE ARLYDDGLYR AIDIYLKSHP RILEAEREKI
401: CSVMDFQKLT IEGCTHAAQN ERLPLRAVVK VLFLEQLQLR TLVTAVTEQD GGETAGEAKV DFGVWEKVVK ENEVLRLDMD AMRTRLYHLE SEYLNLKEVI
501: AKIDKERLYV ANARPRKWSI SNKFGCKFKT QVCDSHEAKM VDGRCQRR

Best Arabidopsis Sequence Match ( AT3G50840.1 )
(BLAST)

001: MANSKKQAWF FYTTGLPSDI EIEVDDITFH LHKFPLMSKS KKLHQLITEQ EQSKVYSHIK LENFPGGSEI FEMVIKISYG FKVDISVSTA VPLRCAAEYL
101: EMTEEYSPEN LISKTEKFLS EFVFTNVQES IKALKACESV SSLAESLCIT EQCIDSIVFQ ASSTDPSSFY GWPINNGGIF TVDRKKQSKD SKTELWFEDL
201: TELSFPIFRR VILSMKSSVL SPEIVERSLL TYAKKHIPGI SRSSSASSSS SSSSTTIASE NQQRELLETI TSDLPLTATT TRSLFGLLRA AIILNASENC
301: RKFLEKKIGS NLEKATLDDL LIPSYSYLNE TLYDIDLVER LLRRFLENVA VSSSSLTVVG RLIDGVLGEI ASDANLKPEQ FYNLAVLLPV QARVYDDGLY
401: RAVDIYFKTH SWILEEEKEK ICSVMDCRKL TVEGCTHAAQ NERLPLRAVV QVLFLEQLQL RQVITGTLLT EEDGDKTVVD LGRWKEAVKE NQVLRLDMDT
501: MRTRVNQLEK ECLYLKKVIA KIDKESLLKA KHGAGKWSIG KKFGCKFSAQ VCDSQEATMV DRRSRRFLS

Arabidopsis Description

BTB/POZ domain-containing protein At3g50840 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPQ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.